3WWGA

Crystal structure of the n-glycan-deficient variant n448a of isopullulanase complexed with isopanose
Total Genus 184
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
184
sequence length
547
structure length
536
Chain Sequence
FMAVTANNSQLLTWWHNTGEINTQTPVADGNVRQSGLYSVKVQTTPASLYYDSFVYLAIPGNGMSDQLQYTQGYNQTQAWTSFLYSHDATVKISRNGSNVVIRPTSLNFPVRYDNQSVYITVPYSPTGYRFSVEFDDDLISLAPSGARQPENALLIFASPFENSSTKPQPGSPNSIAPAPGRVLGLNTTSASTVVFNPGVYYFTGHDHMVLSSSVTWVYFAPGAYVKGAVEFLSTASEVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRGTLGNSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMYPGTILQDVFYHTDDDGLKMYYSNVTARNIVMWKESVAPVVEFGWTPRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYASAHSTGNSNMTVRNITWSNFRAEGSSSALFRINPIQNLDNISIKNVSIESFEPLSINTTESWMPVWYDLNNGKQITVTDFSIEGFTVGNTTITASNAASVGRIDGVDPAYAGSVHYID
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
molecule keywords Isopullulanase
publication title The side chain of a glycosylated asparagine residue is important for the stability of isopullulanase
pubmed doi rcsb
source organism Aspergillus niger
total genus 184
structure length 536
sequence length 547
chains with identical sequence B, C, D
ec nomenclature ec 3.2.1.57: Isopullulanase.
pdb deposition date 2014-06-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03718 Glyco_hydro_49 Glycosyl hydrolase family 49
A PF18783 IPU_b_solenoid Isopullulanase beta-solenoid repeat
A PF18841 B_solenoid_dext Beta solenoid repeat from Dextranase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.350.10 Mainly Beta Sandwich Dex49a from penicillium minioluteum complex, domain 1 Dextranase, N-terminal 3wwgA01
2.160.20.10 Mainly Beta 3 Solenoid Pectate Lyase C-like Single-stranded right-handed beta-helix, Pectin lyase-like 3wwgA02
1DBGA 4XNFA 4W8RA 3T9GA 2PYHA 2BSPA 4OZYA 4Z05A 4XM3A 4XQFA 3B90A 2VJJA 1O8GA 1OGMX 1PXZA 4XOTA 1O8JA 4YZQA 4YELA 2NZMA 4XR6A 1KCDA 2X85A 3EQNA 1O8FA 1VBLA 4XN0A 1OOCA 4AVZA 4OJLA 3GQ7A 2QX3A 2VBEA 3GQ8A 4MR0A 1QCXA 4MXNA 1BHEA 2EWEA 1RWRA 4OJPA 3VMWA 4XOPA 1XG2A 1OFMA 4W8TA 5C1CA 1RMGA 1IDJA 2NTPA 4XLEA 2X6YA 1X0CA 4OJOA 1WMRA 1OFLA 3GQ9A 4U49A 1NHCA 4XLAA 1PE9A 1O8DA 2PECA 1HG8A 2NSPA 1DBOA 2NSTA 3VMVA 5C1EA 1IB4A 1O8KA 2X6WA 2IQ7A 1H80A 1K5CA 2QY1A 4XLHA 3VSUA 3LMWA 3KRGA 3VSTA 4XORA 1O8HA 3FY3A 2UVFA 1O8EA 4XLCA 4URRA 4Z06A 3EQOA 2VBMA 1GQ8A 1OGOX 1O8IA 2NT6A 1BN8A 1PLUA 4XL9A 4I84A 2UVEA 2X3HA 1RU4A 3ZPPA 2NT9A 1JRGA 1AIRA 5AMVA 2INVA 3VSVA 2O04A 4YZ0A 4C2LA 4OJ6A 4XONA 1O8MA 3JURA 4YZAA 2O1DA 1QJVA 4OZZA 4W8SA 4OJ5A 4EW9A 1EE6A 1IA5A 2QXZA 3ZSCA 4YEJA 4NK6A 4NK8A 1KTWA 4YZXA 1IDKA 1O88A 2O0VA 1JTAA 4XLFA 3GQAA 1O8LA 2Z8GA 2PYGA 2NTBA 4Z03A 3UW0A 2VBKA 2VJIA 4PMHA 1KCCA 3B4NA 2X6XA 2ODLA 4HWVA 4U4BA 3SUCA 3GRHA 3WWGA 4XKWA 4XN3A 2O0WA 4XKVA 4XMYA 4W8QA 1CZFA 2O17A 2NTQA 3B8YA 2INUA
chains in the Genus database with same CATH superfamily
1DBGA 4XNFA 4W8RA 3T9GA 2PYHA 3AK5A 4JRAC 2BSPA 5JLVC 4OZYA 4Z05A 4XM3A 4XQFA 4YDTA 3B90A 4YC5A 2XT2A 2VJJA 1O8GA 2G0YA 4V02C 1OGMX 1PXZA 4XOTA 1HF2A 1O8JA 3LYCA 3NB2A 3BH7B 4YZQA 4YELA 2NZMA 4XR6A 1KCDA 2X85A 3EQNA 1O8FA 3PSSA 1TYUA 1VBLA 1TYXA 4XN0A 1QA2A 4KH3A 1OOCA 4YEIA 4AVZA 4OJLA 3GQ7A 1LLZA 2QX3A 2VBEA 3N6ZA 3GQ8A 4MR0A 1QCXA 4MXNA 3SZEA 1BHEA 2EWEA 1RWRA 4OJPA 3VMWA 2YUHA 3SYJA 3ML3A 3P4GA 4YFOA 4XOPA 1XG2A 1EZGA 1WXRA 1OFMA 4W8TA 3PSZA 1OFEA 5C1CA 1RMGA 1IDJA 2NTPA 4XLEA 1LLWA 2X6YA 1X0CA 4OPWA 4OJOA 1WMRA 1OFLA 3GQ9A 4U49A 1NHCA 4XLAA 2XC1A 2W7ZA 1PE9A 1O8DA 2VFPA 2BM7A 2PECA 2V5IA 1HG8A 2NSPA 1L1IA 1TYWA 1DBOA 2IOUG 2NSTA 3VMVA 3NAWA 5C1EA 1IB4A 2VFNA 1O8KA 2J8IA 2X6WA 2IQ7A 1H80A 1K5CA 2QY1A 1QRCA 4XLHA 3VSUA 3SY2A 3LMWA 3KRGA 3VSTA 4XORA 1O8HA 4OM9A 2VFMA 2UVFA 1O8EA 3FY3A 4XLCA 2F3LA 4URRA 4Z06A 2BM5A 3EQOA 2VBMA 1GQ8A 1OGOX 1O8IA 2NT6A 2XTXA 2J8KA 1BN8A 1PLUA 4XL9A 4I84A 2UVEA 2X3HA 1RU4A 3ZPPA 3PETA 2NT9A 1JRGA 1LM1A 4YCQA 1AIRA 5AMVA 1KQ5A 1K8FA 2BX6A 2INVA 3VSVA 1CLWA 3DU1X 2O04A 4YZ0A 4C2LA 1TSPA 4OJ6A 1DABA 3H09A 4XONA 1O8MA 3JURA 4YZAA 2XT4A 2O1DA 1EA0A 1QJVA 3BH6B 4OZZA 4W8SA 2VFQA 1QA1A 4OJ5A 4EW9A 1EE6A 2O6WA 2QXZA 1IA5A 3ZSCA 4YEJA 3JX8A 4NK6A 4NK8A 1KTWA 2QZAA 4YZXA 1IDKA 3N90A 3TH0A 1O88A 2O0VA 1JTAA 2B0RA 5JMCB 4XLFA 3RIQA 3GQAA 1O8LA 1K4ZA 2Z8GA 2PYGA 2NTBA 4Z03A 1QRBA 3UW0A 2VBKA 1OFDA 2VJIA 1TYVA 2XTYA 1QQ1A 3LJYA 1QA3A 2BM4A 4PMHA 3SQVA 1KCCA 3B4NA 2X6XA 2ODLA 4HWVA 5DNSA 2QYUA 2XTWA 3GRHA 4U4BA 3SUCA 3WWGA 4XKWA 4XN3A 2O0WA 4XKVA 2VFOA 4W8QA 1CZFA 4XMYA 2O17A 2NTQA 2BM6A 3B8YA 2INUA
chains in the Genus database with same CATH topology
1DBGA 4XNFA 4W8RA 3T9GA 2PYHA 2BSPA 4OZYA 4Z05A 4XM3A 4XQFA 3B90A 2VJJA 1O8GA 1OGMX 1PXZA 4XOTA 1O8JA 4YZQA 4YELA 2NZMA 4XR6A 1KCDA 2X85A 3EQNA 1O8FA 1VBLA 4XN0A 1OOCA 4AVZA 4OJLA 3GQ7A 2QX3A 2VBEA 3GQ8A 4MR0A 1QCXA 4MXNA 1BHEA 2EWEA 1RWRA 4OJPA 3VMWA 4XOPA 1XG2A 1OFMA 4W8TA 5C1CA 1RMGA 1IDJA 2NTPA 4XLEA 2X6YA 1X0CA 4OJOA 1WMRA 1OFLA 3GQ9A 4U49A 1NHCA 4XLAA 1PE9A 1O8DA 2PECA 1HG8A 2NSPA 1DBOA 2NSTA 3VMVA 5C1EA 1IB4A 1O8KA 2X6WA 2IQ7A 1H80A 1K5CA 2QY1A 4XLHA 3VSUA 3LMWA 3KRGA 3VSTA 4XORA 1O8HA 3FY3A 2UVFA 1O8EA 4XLCA 4URRA 4Z06A 3EQOA 2VBMA 1GQ8A 1OGOX 1O8IA 2NT6A 1BN8A 1PLUA 4XL9A 4I84A 2UVEA 2X3HA 1RU4A 3ZPPA 2NT9A 1JRGA 1AIRA 5AMVA 2INVA 3VSVA 2O04A 4YZ0A 4C2LA 4OJ6A 4XONA 1O8MA 3JURA 4YZAA 2O1DA 1QJVA 4OZZA 4W8SA 4OJ5A 4EW9A 1EE6A 1IA5A 2QXZA 3ZSCA 4YEJA 4NK6A 4NK8A 1KTWA 4YZXA 1IDKA 1O88A 2O0VA 1JTAA 4XLFA 3GQAA 1O8LA 2Z8GA 2PYGA 2NTBA 4Z03A 3UW0A 2VBKA 2VJIA 4PMHA 1KCCA 3B4NA 2X6XA 2ODLA 4HWVA 4U4BA 3SUCA 3GRHA 3WWGA 4XKWA 4XN3A 2O0WA 4XKVA 4XMYA 4W8QA 1CZFA 2O17A 2NTQA 3B8YA 2INUA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1DBG A;  4XNF A;  4W8R A;  3T9G A;  2PYH A;  2BSP A;  4OZY A;  4Z05 A;  4XM3 A;  4XQF A;  3B90 A;  2VJJ A;  1O8G A;  1OGM X;  1PXZ A;  4XOT A;  1O8J A;  4YZQ A;  4YEL A;  2NZM A;  4XR6 A;  1KCD A;  2X85 A;  3EQN A;  1O8F A;  1VBL A;  4XN0 A;  1OOC A;  4AVZ A;  4OJL A;  3GQ7 A;  2QX3 A;  2VBE A;  3GQ8 A;  4MR0 A;  1QCX A;  4MXN A;  1BHE A;  2EWE A;  1RWR A;  4OJP A;  3VMW A;  4XOP A;  1XG2 A;  1OFM A;  4W8T A;  5C1C A;  1RMG A;  1IDJ A;  2NTP A;  4XLE A;  2X6Y A;  1X0C A;  4OJO A;  1WMR A;  1OFL A;  3GQ9 A;  4U49 A;  1NHC A;  4XLA A;  1PE9 A;  1O8D A;  2PEC A;  1HG8 A;  2NSP A;  1DBO A;  2NST A;  3VMV A;  5C1E A;  1IB4 A;  1O8K A;  2X6W A;  2IQ7 A;  1H80 A;  1K5C A;  2QY1 A;  4XLH A;  3VSU A;  3LMW A;  3KRG A;  3VST A;  4XOR A;  1O8H A;  3FY3 A;  2UVF A;  1O8E A;  4XLC A;  4URR A;  4Z06 A;  3EQO A;  2VBM A;  1GQ8 A;  1OGO X;  1O8I A;  2NT6 A;  1BN8 A;  1PLU A;  4XL9 A;  4I84 A;  2UVE A;  2X3H A;  1RU4 A;  3ZPP A;  2NT9 A;  1JRG A;  1AIR A;  5AMV A;  2INV A;  3VSV A;  2O04 A;  4YZ0 A;  4C2L A;  4OJ6 A;  4XON A;  1O8M A;  3JUR A;  4YZA A;  2O1D A;  1QJV A;  4OZZ A;  4W8S A;  4OJ5 A;  4EW9 A;  1EE6 A;  1IA5 A;  2QXZ A;  3ZSC A;  4YEJ A;  4NK6 A;  4NK8 A;  1KTW A;  4YZX A;  1IDK A;  1O88 A;  2O0V A;  1JTA A;  4XLF A;  3GQA A;  1O8L A;  2Z8G A;  2PYG A;  2NTB A;  4Z03 A;  3UW0 A;  2VBK A;  2VJI A;  4PMH A;  1KCC A;  3B4N A;  2X6X A;  2ODL A;  4HWV A;  4U4B A;  3SUC A;  3GRH A;  3WWG A;  4XKW A;  4XN3 A;  2O0W A;  4XKV A;  4XMY A;  4W8Q A;  1CZF A;  2O17 A;  2NTQ A;  3B8Y A;  2INU A; 
#chains in the Genus database with same CATH topology
 1DBG A;  4XNF A;  4W8R A;  3T9G A;  2PYH A;  3AK5 A;  4JRA C;  2BSP A;  5JLV C;  4OZY A;  4Z05 A;  4XM3 A;  4XQF A;  4YDT A;  3B90 A;  4YC5 A;  2XT2 A;  2VJJ A;  1O8G A;  2G0Y A;  4V02 C;  1OGM X;  1PXZ A;  4XOT A;  1HF2 A;  1O8J A;  3LYC A;  3NB2 A;  3BH7 B;  4YZQ A;  4YEL A;  2NZM A;  4XR6 A;  1KCD A;  2X85 A;  3EQN A;  1O8F A;  3PSS A;  1TYU A;  1VBL A;  1TYX A;  4XN0 A;  1QA2 A;  4KH3 A;  1OOC A;  4YEI A;  4AVZ A;  4OJL A;  3GQ7 A;  1LLZ A;  2QX3 A;  2VBE A;  3N6Z A;  3GQ8 A;  4MR0 A;  1QCX A;  4MXN A;  3SZE A;  1BHE A;  2EWE A;  1RWR A;  4OJP A;  3VMW A;  2YUH A;  3SYJ A;  3ML3 A;  3P4G A;  4YFO A;  4XOP A;  1XG2 A;  1EZG A;  1WXR A;  1OFM A;  4W8T A;  3PSZ A;  1OFE A;  5C1C A;  1RMG A;  1IDJ A;  2NTP A;  4XLE A;  1LLW A;  2X6Y A;  1X0C A;  4OPW A;  4OJO A;  1WMR A;  1OFL A;  3GQ9 A;  4U49 A;  1NHC A;  4XLA A;  2XC1 A;  2W7Z A;  1PE9 A;  1O8D A;  2VFP A;  2BM7 A;  2PEC A;  2V5I A;  1HG8 A;  2NSP A;  1L1I A;  1TYW A;  1DBO A;  2IOU G;  2NST A;  3VMV A;  3NAW A;  5C1E A;  1IB4 A;  2VFN A;  1O8K A;  2J8I A;  2X6W A;  2IQ7 A;  1H80 A;  1K5C A;  2QY1 A;  1QRC A;  4XLH A;  3VSU A;  3SY2 A;  3LMW A;  3KRG A;  3VST A;  4XOR A;  1O8H A;  4OM9 A;  2VFM A;  2UVF A;  1O8E A;  3FY3 A;  4XLC A;  2F3L A;  4URR A;  4Z06 A;  2BM5 A;  3EQO A;  2VBM A;  1GQ8 A;  1OGO X;  1O8I A;  2NT6 A;  2XTX A;  2J8K A;  1BN8 A;  1PLU A;  4XL9 A;  4I84 A;  2UVE A;  2X3H A;  1RU4 A;  3ZPP A;  3PET A;  2NT9 A;  1JRG A;  1LM1 A;  4YCQ A;  1AIR A;  5AMV A;  1KQ5 A;  1K8F A;  2BX6 A;  2INV A;  3VSV A;  1CLW A;  3DU1 X;  2O04 A;  4YZ0 A;  4C2L A;  1TSP A;  4OJ6 A;  1DAB A;  3H09 A;  4XON A;  1O8M A;  3JUR A;  4YZA A;  2XT4 A;  2O1D A;  1EA0 A;  1QJV A;  3BH6 B;  4OZZ A;  4W8S A;  2VFQ A;  1QA1 A;  4OJ5 A;  4EW9 A;  1EE6 A;  2O6W A;  2QXZ A;  1IA5 A;  3ZSC A;  4YEJ A;  3JX8 A;  4NK6 A;  4NK8 A;  1KTW A;  2QZA A;  4YZX A;  1IDK A;  3N90 A;  3TH0 A;  1O88 A;  2O0V A;  1JTA A;  2B0R A;  5JMC B;  4XLF A;  3RIQ A;  3GQA A;  1O8L A;  1K4Z A;  2Z8G A;  2PYG A;  2NTB A;  4Z03 A;  1QRB A;  3UW0 A;  2VBK A;  1OFD A;  2VJI A;  1TYV A;  2XTY A;  1QQ1 A;  3LJY A;  1QA3 A;  2BM4 A;  4PMH A;  3SQV A;  1KCC A;  3B4N A;  2X6X A;  2ODL A;  4HWV A;  5DNS A;  2QYU A;  2XTW A;  3GRH A;  4U4B A;  3SUC A;  3WWG A;  4XKW A;  4XN3 A;  2O0W A;  4XKV A;  2VFO A;  4W8Q A;  1CZF A;  4XMY A;  2O17 A;  2NTQ A;  2BM6 A;  3B8Y A;  2INU A; 
#chains in the Genus database with same CATH homology
 1DBG A;  4XNF A;  4W8R A;  3T9G A;  2PYH A;  2BSP A;  4OZY A;  4Z05 A;  4XM3 A;  4XQF A;  3B90 A;  2VJJ A;  1O8G A;  1OGM X;  1PXZ A;  4XOT A;  1O8J A;  4YZQ A;  4YEL A;  2NZM A;  4XR6 A;  1KCD A;  2X85 A;  3EQN A;  1O8F A;  1VBL A;  4XN0 A;  1OOC A;  4AVZ A;  4OJL A;  3GQ7 A;  2QX3 A;  2VBE A;  3GQ8 A;  4MR0 A;  1QCX A;  4MXN A;  1BHE A;  2EWE A;  1RWR A;  4OJP A;  3VMW A;  4XOP A;  1XG2 A;  1OFM A;  4W8T A;  5C1C A;  1RMG A;  1IDJ A;  2NTP A;  4XLE A;  2X6Y A;  1X0C A;  4OJO A;  1WMR A;  1OFL A;  3GQ9 A;  4U49 A;  1NHC A;  4XLA A;  1PE9 A;  1O8D A;  2PEC A;  1HG8 A;  2NSP A;  1DBO A;  2NST A;  3VMV A;  5C1E A;  1IB4 A;  1O8K A;  2X6W A;  2IQ7 A;  1H80 A;  1K5C A;  2QY1 A;  4XLH A;  3VSU A;  3LMW A;  3KRG A;  3VST A;  4XOR A;  1O8H A;  3FY3 A;  2UVF A;  1O8E A;  4XLC A;  4URR A;  4Z06 A;  3EQO A;  2VBM A;  1GQ8 A;  1OGO X;  1O8I A;  2NT6 A;  1BN8 A;  1PLU A;  4XL9 A;  4I84 A;  2UVE A;  2X3H A;  1RU4 A;  3ZPP A;  2NT9 A;  1JRG A;  1AIR A;  5AMV A;  2INV A;  3VSV A;  2O04 A;  4YZ0 A;  4C2L A;  4OJ6 A;  4XON A;  1O8M A;  3JUR A;  4YZA A;  2O1D A;  1QJV A;  4OZZ A;  4W8S A;  4OJ5 A;  4EW9 A;  1EE6 A;  1IA5 A;  2QXZ A;  3ZSC A;  4YEJ A;  4NK6 A;  4NK8 A;  1KTW A;  4YZX A;  1IDK A;  1O88 A;  2O0V A;  1JTA A;  4XLF A;  3GQA A;  1O8L A;  2Z8G A;  2PYG A;  2NTB A;  4Z03 A;  3UW0 A;  2VBK A;  2VJI A;  4PMH A;  1KCC A;  3B4N A;  2X6X A;  2ODL A;  4HWV A;  4U4B A;  3SUC A;  3GRH A;  3WWG A;  4XKW A;  4XN3 A;  2O0W A;  4XKV A;  4XMY A;  4W8Q A;  1CZF A;  2O17 A;  2NTQ A;  3B8Y A;  2INU A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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