3ZEZA

Phage dutpases control transfer of virulence genes by a proto- oncogenic g protein-like mechanism.(staphylococcus bacteriophage 80alpha dutpase with dupnhpp).
Total Genus 25
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
25
sequence length
169
structure length
169
Chain Sequence
TNTLQVKLLSKNARMPERNHKTDAGYDIFSAETVVLEPQEKAVIKTDVAVSIPEGYVGLLTSRSGVSSKTHLVIETGKIDAGYHGNLGINIKNDHEDDKMQTIFLRNIDNEKIFEKERHLYKLGSYRIEKGERIAQLVIVPIWTPELKQVEEFESVSERGEKGFGSSGV
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords DUTPASE
publication title Phage Dutpases Control Transfer of Virulence Genes by a Proto-Oncogenic G Protein-Like Mechanism.
pubmed doi rcsb
source organism Staphylococcus phage 80alpha
total genus 25
structure length 169
sequence length 169
ec nomenclature ec 3.6.1.23: dUTP diphosphatase.
pdb deposition date 2012-12-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00692 dUTPase dUTPase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.40.10 Mainly Beta Distorted Sandwich Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A 3zezA00
3TRNA 3C2TA 2OKBA 1F7DA 3TTAA 3ZEZA 2XCEA 5F9KA 3ECYA 2YZJA 1XS1A 4AOZA 1SEHA 4OOQA 3ARAA 4A6AA 2XY3A 4GCYA 1Q5UX 2J4HA 3TQ4A 3ZF2A 1RNJA 2HXDA 3TQ5A 1PKJA 2WE2A 1EUWA 2BAZA 3EHWA 4XJCA 4GK6A 2WE0A 3LQWA 2WE3A 1F7NA 2WE1A 3LOJA 3KM3A 1SNFA 3CA9A 1SYLA 1PKKA 2XX6A 5EDDA 1XS4A 3TQZA 2HXBA 2J4QA 3T6YA 4AO5A 2D4MA 1OGHA 1DUCA 3F4FA 3TQ3A 2Y1TA 3TPNA 1F7OA 2OL0A 1DUNA 4AOOA 2HR6A 3TSLA 2PY4A 1RN8A 1EU5A 2ZDCA 1PKHA 3HZAA 2V9XA 4LHRA 1SLHA 4DHKA 3SO2A 3MDXA 3I93A 4OOPA 3TPYA 3GF0A 3ARNA 2HQUA 2PC5A 3TPSA 3ZF1A 5ECTA 2QXXA 2OL1A 1DUPA 1VYQA 1DUDA 1MQ7A 1XS6A 1DUTA 1SM8A 2BT1A 3ZF6A 2HRMA 3ZF0A 3H6DA 2OKDA 3H6XA 5CCOA 2D4LA 3ZF5A 3T64A 2Y8CA 3TRLA 3TS6A 1F7PA 1Q5HA 3HHQA 4GV8A 3C3IA 3T60A 1SJNA 2D4NA 1SMCA 2OKEA 4B0HA 5CCTA 4APZ1 3ZF3A 2R9QA 2BSYA 2XCDA 3MBQA 3P48A 4WRKA 3TPWA 3TP1A 1F7QA 1SIXA 3ZF4A 1F7RA 3T70A 2QLPA 1F7KA
chains in the Genus database with same CATH superfamily
3TRNA 3C2TA 2OKBA 1F7DA 3TTAA 3ZEZA 2XCEA 5F9KA 3ECYA 2YZJA 1XS1A 4AOZA 1SEHA 4OOQA 3ARAA 4A6AA 2XY3A 4GCYA 1Q5UX 2J4HA 3TQ4A 3ZF2A 1RNJA 2HXDA 3TQ5A 1PKJA 2WE2A 1EUWA 2BAZA 3EHWA 4XJCA 4GK6A 2WE0A 3LQWA 2WE3A 1F7NA 2WE1A 3LOJA 3KM3A 1SNFA 3CA9A 1SYLA 1PKKA 2XX6A 5EDDA 1XS4A 3TQZA 2HXBA 2J4QA 3T6YA 4AO5A 2D4MA 1OGHA 1DUCA 3F4FA 3TQ3A 2Y1TA 3TPNA 1F7OA 2OL0A 1DUNA 4AOOA 2HR6A 3TSLA 2PY4A 1RN8A 1EU5A 2ZDCA 1PKHA 3HZAA 2V9XA 4LHRA 1SLHA 4DHKA 3SO2A 3MDXA 3I93A 4OOPA 3TPYA 3GF0A 3ARNA 2HQUA 2PC5A 3TPSA 3ZF1A 5ECTA 2QXXA 2OL1A 1DUPA 1VYQA 1DUDA 1MQ7A 1XS6A 1DUTA 1SM8A 2BT1A 3ZF6A 2HRMA 3ZF0A 3H6DA 2OKDA 3H6XA 5CCOA 2D4LA 3ZF5A 3T64A 2Y8CA 3TRLA 3TS6A 1F7PA 1Q5HA 3HHQA 4GV8A 1TULA 3C3IA 3T60A 1SJNA 2D4NA 1SMCA 2OKEA 4B0HA 5CCTA 4APZ1 3ZF3A 2R9QA 2BSYA 2XCDA 3MBQA 3P48A 4WRKA 3TPWA 3TP1A 1F7QA 1SIXA 3ZF4A 1F7RA 3T70A 2QLPA 1F7KA
chains in the Genus database with same CATH topology
3TRNA 3C2TA 2OKBA 1F7DA 3TTAA 3ZEZA 2XCEA 5F9KA 3ECYA 2YZJA 1XS1A 4AOZA 1SEHA 4OOQA 3ARAA 4A6AA 2XY3A 4GCYA 1Q5UX 2J4HA 3TQ4A 3ZF2A 1RNJA 2HXDA 3TQ5A 1PKJA 2WE2A 1EUWA 2BAZA 3EHWA 4XJCA 4GK6A 2WE0A 3LQWA 2WE3A 1F7NA 2WE1A 3LOJA 3KM3A 1SNFA 3CA9A 1SYLA 1PKKA 2XX6A 5EDDA 1XS4A 3TQZA 2HXBA 2J4QA 3T6YA 4AO5A 2D4MA 1OGHA 1DUCA 3F4FA 3TQ3A 2Y1TA 3TPNA 1F7OA 2OL0A 1DUNA 4AOOA 2HR6A 3TSLA 2PY4A 1RN8A 1EU5A 2ZDCA 1PKHA 3HZAA 2V9XA 4LHRA 1SLHA 4DHKA 3SO2A 3MDXA 3I93A 4OOPA 3TPYA 3GF0A 3ARNA 2HQUA 2PC5A 3TPSA 3ZF1A 5ECTA 2QXXA 2OL1A 1DUPA 1VYQA 1DUDA 1MQ7A 1XS6A 1DUTA 1SM8A 2BT1A 3ZF6A 2HRMA 3ZF0A 3H6DA 2OKDA 3H6XA 5CCOA 2D4LA 3ZF5A 3T64A 2Y8CA 3TRLA 3TS6A 1F7PA 1Q5HA 3HHQA 4GV8A 3C3IA 3T60A 1SJNA 2D4NA 1SMCA 2OKEA 4B0HA 5CCTA 4APZ1 3ZF3A 2R9QA 2BSYA 2XCDA 3MBQA 3P48A 4WRKA 3TPWA 3TP1A 1F7QA 1SIXA 3ZF4A 1F7RA 3T70A 2QLPA 1F7KA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3TRN A;  3C2T A;  2OKB A;  1F7D A;  3TTA A;  3ZEZ A;  2XCE A;  5F9K A;  3ECY A;  2YZJ A;  1XS1 A;  4AOZ A;  1SEH A;  4OOQ A;  3ARA A;  4A6A A;  2XY3 A;  4GCY A;  1Q5U X;  2J4H A;  3TQ4 A;  3ZF2 A;  1RNJ A;  2HXD A;  3TQ5 A;  1PKJ A;  2WE2 A;  1EUW A;  2BAZ A;  3EHW A;  4XJC A;  4GK6 A;  2WE0 A;  3LQW A;  2WE3 A;  1F7N A;  2WE1 A;  3LOJ A;  3KM3 A;  1SNF A;  3CA9 A;  1SYL A;  1PKK A;  2XX6 A;  5EDD A;  1XS4 A;  3TQZ A;  2HXB A;  2J4Q A;  3T6Y A;  4AO5 A;  2D4M A;  1OGH A;  1DUC A;  3F4F A;  3TQ3 A;  2Y1T A;  3TPN A;  1F7O A;  2OL0 A;  1DUN A;  4AOO A;  2HR6 A;  3TSL A;  2PY4 A;  1RN8 A;  1EU5 A;  2ZDC A;  1PKH A;  3HZA A;  2V9X A;  4LHR A;  1SLH A;  4DHK A;  3SO2 A;  3MDX A;  3I93 A;  4OOP A;  3TPY A;  3GF0 A;  3ARN A;  2HQU A;  2PC5 A;  3TPS A;  3ZF1 A;  5ECT A;  2QXX A;  2OL1 A;  1DUP A;  1VYQ A;  1DUD A;  1MQ7 A;  1XS6 A;  1DUT A;  1SM8 A;  2BT1 A;  3ZF6 A;  2HRM A;  3ZF0 A;  3H6D A;  2OKD A;  3H6X A;  5CCO A;  2D4L A;  3ZF5 A;  3T64 A;  2Y8C A;  3TRL A;  3TS6 A;  1F7P A;  1Q5H A;  3HHQ A;  4GV8 A;  3C3I A;  3T60 A;  1SJN A;  2D4N A;  1SMC A;  2OKE A;  4B0H A;  5CCT A;  4APZ 1;  3ZF3 A;  2R9Q A;  2BSY A;  2XCD A;  3MBQ A;  3P48 A;  4WRK A;  3TPW A;  3TP1 A;  1F7Q A;  1SIX A;  3ZF4 A;  1F7R A;  3T70 A;  2QLP A;  1F7K A; 
#chains in the Genus database with same CATH topology
 3TRN A;  3C2T A;  2OKB A;  1F7D A;  3TTA A;  3ZEZ A;  2XCE A;  5F9K A;  3ECY A;  2YZJ A;  1XS1 A;  4AOZ A;  1SEH A;  4OOQ A;  3ARA A;  4A6A A;  2XY3 A;  4GCY A;  1Q5U X;  2J4H A;  3TQ4 A;  3ZF2 A;  1RNJ A;  2HXD A;  3TQ5 A;  1PKJ A;  2WE2 A;  1EUW A;  2BAZ A;  3EHW A;  4XJC A;  4GK6 A;  2WE0 A;  3LQW A;  2WE3 A;  1F7N A;  2WE1 A;  3LOJ A;  3KM3 A;  1SNF A;  3CA9 A;  1SYL A;  1PKK A;  2XX6 A;  5EDD A;  1XS4 A;  3TQZ A;  2HXB A;  2J4Q A;  3T6Y A;  4AO5 A;  2D4M A;  1OGH A;  1DUC A;  3F4F A;  3TQ3 A;  2Y1T A;  3TPN A;  1F7O A;  2OL0 A;  1DUN A;  4AOO A;  2HR6 A;  3TSL A;  2PY4 A;  1RN8 A;  1EU5 A;  2ZDC A;  1PKH A;  3HZA A;  2V9X A;  4LHR A;  1SLH A;  4DHK A;  3SO2 A;  3MDX A;  3I93 A;  4OOP A;  3TPY A;  3GF0 A;  3ARN A;  2HQU A;  2PC5 A;  3TPS A;  3ZF1 A;  5ECT A;  2QXX A;  2OL1 A;  1DUP A;  1VYQ A;  1DUD A;  1MQ7 A;  1XS6 A;  1DUT A;  1SM8 A;  2BT1 A;  3ZF6 A;  2HRM A;  3ZF0 A;  3H6D A;  2OKD A;  3H6X A;  5CCO A;  2D4L A;  3ZF5 A;  3T64 A;  2Y8C A;  3TRL A;  3TS6 A;  1F7P A;  1Q5H A;  3HHQ A;  4GV8 A;  1TUL A;  3C3I A;  3T60 A;  1SJN A;  2D4N A;  1SMC A;  2OKE A;  4B0H A;  5CCT A;  4APZ 1;  3ZF3 A;  2R9Q A;  2BSY A;  2XCD A;  3MBQ A;  3P48 A;  4WRK A;  3TPW A;  3TP1 A;  1F7Q A;  1SIX A;  3ZF4 A;  1F7R A;  3T70 A;  2QLP A;  1F7K A; 
#chains in the Genus database with same CATH homology
 3TRN A;  3C2T A;  2OKB A;  1F7D A;  3TTA A;  3ZEZ A;  2XCE A;  5F9K A;  3ECY A;  2YZJ A;  1XS1 A;  4AOZ A;  1SEH A;  4OOQ A;  3ARA A;  4A6A A;  2XY3 A;  4GCY A;  1Q5U X;  2J4H A;  3TQ4 A;  3ZF2 A;  1RNJ A;  2HXD A;  3TQ5 A;  1PKJ A;  2WE2 A;  1EUW A;  2BAZ A;  3EHW A;  4XJC A;  4GK6 A;  2WE0 A;  3LQW A;  2WE3 A;  1F7N A;  2WE1 A;  3LOJ A;  3KM3 A;  1SNF A;  3CA9 A;  1SYL A;  1PKK A;  2XX6 A;  5EDD A;  1XS4 A;  3TQZ A;  2HXB A;  2J4Q A;  3T6Y A;  4AO5 A;  2D4M A;  1OGH A;  1DUC A;  3F4F A;  3TQ3 A;  2Y1T A;  3TPN A;  1F7O A;  2OL0 A;  1DUN A;  4AOO A;  2HR6 A;  3TSL A;  2PY4 A;  1RN8 A;  1EU5 A;  2ZDC A;  1PKH A;  3HZA A;  2V9X A;  4LHR A;  1SLH A;  4DHK A;  3SO2 A;  3MDX A;  3I93 A;  4OOP A;  3TPY A;  3GF0 A;  3ARN A;  2HQU A;  2PC5 A;  3TPS A;  3ZF1 A;  5ECT A;  2QXX A;  2OL1 A;  1DUP A;  1VYQ A;  1DUD A;  1MQ7 A;  1XS6 A;  1DUT A;  1SM8 A;  2BT1 A;  3ZF6 A;  2HRM A;  3ZF0 A;  3H6D A;  2OKD A;  3H6X A;  5CCO A;  2D4L A;  3ZF5 A;  3T64 A;  2Y8C A;  3TRL A;  3TS6 A;  1F7P A;  1Q5H A;  3HHQ A;  4GV8 A;  3C3I A;  3T60 A;  1SJN A;  2D4N A;  1SMC A;  2OKE A;  4B0H A;  5CCT A;  4APZ 1;  3ZF3 A;  2R9Q A;  2BSY A;  2XCD A;  3MBQ A;  3P48 A;  4WRK A;  3TPW A;  3TP1 A;  1F7Q A;  1SIX A;  3ZF4 A;  1F7R A;  3T70 A;  2QLP A;  1F7K A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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