3ZF6A

Phage dutpases control transfer of virulence genes by a proto-oncogenic g protein-like mechanism. (staphylococcus bacteriophage 80alpha dutpase d81a d110c s168c mutant with dupnhpp).
Total Genus 28
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
28
sequence length
169
structure length
169
Chain Sequence
TNTLQVKLLSKNARMPERNHKTDAGYDIFSAETVVLEPQEKAVIKTDVAVSIPEGYVGLLTSRSGVSSKTHLVIETGKIAAGYHGNLGINIKNDHEDDKMQTIFLRNICNEKIFEKERHLYKLGSYRIEKGERIAQLVIVPIWTPELKQVEEFESVSERGEKGFGSCGV
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords DUTPASE
publication title Phage Dutpases Control Transfer of Virulence Genes by a Proto-Oncogenic G Protein-Like Mechanism.
pubmed doi rcsb
source organism Staphylococcus phage 80alpha
total genus 28
structure length 169
sequence length 169
ec nomenclature ec 3.6.1.23: dUTP diphosphatase.
pdb deposition date 2012-12-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00692 dUTPase dUTPase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.40.10 Mainly Beta Distorted Sandwich Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A 3zf6A00
4AO5A 1DUPA 2BAZA 2PY4A 1MQ7A 3HHQA 1F7PA 3I93A 3T64A 1DUCA 2J4HA 2PC5A 2OKEA 3ARNA 5ECTA 3TPNA 2D4NA 2HQUA 2BSYA 1F7NA 1EUWA 3TQ3A 1DUNA 3T6YA 1SNFA 3TPWA 4DHKA 2D4LA 1PKHA 3TQZA 2QLPA 1F7OA 1F7RA 3ZF2A 1SLHA 2J4QA 4GCYA 3T70A 2WE3A 3ARAA 3ZF0A 3ZF3A 3EHWA 2OL0A 2HXBA 4AOZA 1XS4A 3T60A 2OL1A 2OKBA 2WE1A 3H6XA 2HR6A 4GV8A 3SO2A 2Y1TA 3HZAA 3TPYA 2WE0A 1RN8A 3H6DA 2XCEA 3TRNA 3ZF1A 4LHRA 1SEHA 5CCOA 3MDXA 3TQ4A 2XCDA 3TSLA 3C2TA 3TTAA 1SMCA 4XJCA 2XY3A 1RNJA 3P48A 1DUDA 1Q5UX 3KM3A 1DUTA 1SIXA 3LOJA 3ZEZA 1PKKA 1F7DA 1PKJA 2HXDA 5CCTA 3ZF5A 3TPSA 2ZDCA 2HRMA 1VYQA 3TQ5A 4AOOA 1SM8A 1EU5A 1SYLA 4GK6A 3TRLA 1Q5HA 4OOQA 1XS1A 3LQWA 4WRKA 4B0HA 2BT1A 3TP1A 1OGHA 2WE2A 3ZF6A 3MBQA 2XX6A 3ZF4A 3ECYA 4A6AA 3CA9A 3C3IA 3F4FA 4APZ1 2V9XA 2Y8CA 5F9KA 1XS6A 2OKDA 2QXXA 4OOPA 1F7KA 1SJNA 3TS6A 1F7QA 5EDDA 2D4MA 2YZJA 3GF0A 2R9QA
chains in the Genus database with same CATH superfamily
4AO5A 1DUPA 2BAZA 2PY4A 1MQ7A 3HHQA 1F7PA 3I93A 3T64A 1DUCA 2J4HA 2PC5A 2OKEA 3ARNA 5ECTA 3TPNA 2D4NA 2HQUA 2BSYA 1F7NA 1EUWA 3TQ3A 1DUNA 3T6YA 1SNFA 3TPWA 4DHKA 2D4LA 1PKHA 3TQZA 2QLPA 1F7OA 1F7RA 3ZF2A 1SLHA 2J4QA 4GCYA 3T70A 2WE3A 3ARAA 3ZF0A 3ZF3A 3EHWA 2OL0A 2HXBA 4AOZA 1XS4A 3T60A 2OL1A 2OKBA 2WE1A 3H6XA 1TULA 2HR6A 4GV8A 3SO2A 2Y1TA 3HZAA 3TPYA 2WE0A 1RN8A 3H6DA 2XCEA 3TRNA 3ZF1A 4LHRA 1SEHA 5CCOA 3MDXA 3TQ4A 2XCDA 3TSLA 3C2TA 3TTAA 1SMCA 4XJCA 2XY3A 1RNJA 3P48A 1DUDA 1Q5UX 3KM3A 1DUTA 1SIXA 3LOJA 3ZEZA 1PKKA 1F7DA 1PKJA 2HXDA 5CCTA 3ZF5A 3TPSA 2ZDCA 2HRMA 1VYQA 3TQ5A 4AOOA 1SM8A 1EU5A 1SYLA 4GK6A 3TRLA 1Q5HA 4OOQA 1XS1A 3LQWA 4WRKA 4B0HA 2BT1A 3TP1A 1OGHA 2WE2A 3ZF6A 3MBQA 2XX6A 3ZF4A 3ECYA 4A6AA 3CA9A 3C3IA 3F4FA 4APZ1 2V9XA 2Y8CA 5F9KA 1XS6A 2OKDA 2QXXA 4OOPA 1F7KA 1SJNA 3TS6A 1F7QA 5EDDA 2D4MA 2YZJA 3GF0A 2R9QA
chains in the Genus database with same CATH topology
4AO5A 1DUPA 2BAZA 2PY4A 1MQ7A 3HHQA 1F7PA 3I93A 3T64A 1DUCA 2J4HA 2PC5A 2OKEA 3ARNA 5ECTA 3TPNA 2D4NA 2HQUA 2BSYA 1F7NA 1EUWA 3TQ3A 1DUNA 3T6YA 1SNFA 3TPWA 4DHKA 2D4LA 1PKHA 3TQZA 2QLPA 1F7OA 1F7RA 3ZF2A 1SLHA 2J4QA 4GCYA 3T70A 2WE3A 3ARAA 3ZF0A 3ZF3A 3EHWA 2OL0A 2HXBA 4AOZA 1XS4A 3T60A 2OL1A 2OKBA 2WE1A 3H6XA 2HR6A 4GV8A 3SO2A 2Y1TA 3HZAA 3TPYA 2WE0A 1RN8A 3H6DA 2XCEA 3TRNA 3ZF1A 4LHRA 1SEHA 5CCOA 3MDXA 3TQ4A 2XCDA 3TSLA 3C2TA 3TTAA 1SMCA 4XJCA 2XY3A 1RNJA 3P48A 1DUDA 1Q5UX 3KM3A 1DUTA 1SIXA 3LOJA 3ZEZA 1PKKA 1F7DA 1PKJA 2HXDA 5CCTA 3ZF5A 3TPSA 2ZDCA 2HRMA 1VYQA 3TQ5A 4AOOA 1SM8A 1EU5A 1SYLA 4GK6A 3TRLA 1Q5HA 4OOQA 1XS1A 3LQWA 4WRKA 4B0HA 2BT1A 3TP1A 1OGHA 2WE2A 3ZF6A 3MBQA 2XX6A 3ZF4A 3ECYA 4A6AA 3CA9A 3C3IA 3F4FA 4APZ1 2V9XA 2Y8CA 5F9KA 1XS6A 2OKDA 2QXXA 4OOPA 1F7KA 1SJNA 3TS6A 1F7QA 5EDDA 2D4MA 2YZJA 3GF0A 2R9QA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4AO5 A;  1DUP A;  2BAZ A;  2PY4 A;  1MQ7 A;  3HHQ A;  1F7P A;  3I93 A;  3T64 A;  1DUC A;  2J4H A;  2PC5 A;  2OKE A;  3ARN A;  5ECT A;  3TPN A;  2D4N A;  2HQU A;  2BSY A;  1F7N A;  1EUW A;  3TQ3 A;  1DUN A;  3T6Y A;  1SNF A;  3TPW A;  4DHK A;  2D4L A;  1PKH A;  3TQZ A;  2QLP A;  1F7O A;  1F7R A;  3ZF2 A;  1SLH A;  2J4Q A;  4GCY A;  3T70 A;  2WE3 A;  3ARA A;  3ZF0 A;  3ZF3 A;  3EHW A;  2OL0 A;  2HXB A;  4AOZ A;  1XS4 A;  3T60 A;  2OL1 A;  2OKB A;  2WE1 A;  3H6X A;  2HR6 A;  4GV8 A;  3SO2 A;  2Y1T A;  3HZA A;  3TPY A;  2WE0 A;  1RN8 A;  3H6D A;  2XCE A;  3TRN A;  3ZF1 A;  4LHR A;  1SEH A;  5CCO A;  3MDX A;  3TQ4 A;  2XCD A;  3TSL A;  3C2T A;  3TTA A;  1SMC A;  4XJC A;  2XY3 A;  1RNJ A;  3P48 A;  1DUD A;  1Q5U X;  3KM3 A;  1DUT A;  1SIX A;  3LOJ A;  3ZEZ A;  1PKK A;  1F7D A;  1PKJ A;  2HXD A;  5CCT A;  3ZF5 A;  3TPS A;  2ZDC A;  2HRM A;  1VYQ A;  3TQ5 A;  4AOO A;  1SM8 A;  1EU5 A;  1SYL A;  4GK6 A;  3TRL A;  1Q5H A;  4OOQ A;  1XS1 A;  3LQW A;  4WRK A;  4B0H A;  2BT1 A;  3TP1 A;  1OGH A;  2WE2 A;  3ZF6 A;  3MBQ A;  2XX6 A;  3ZF4 A;  3ECY A;  4A6A A;  3CA9 A;  3C3I A;  3F4F A;  4APZ 1;  2V9X A;  2Y8C A;  5F9K A;  1XS6 A;  2OKD A;  2QXX A;  4OOP A;  1F7K A;  1SJN A;  3TS6 A;  1F7Q A;  5EDD A;  2D4M A;  2YZJ A;  3GF0 A;  2R9Q A; 
#chains in the Genus database with same CATH topology
 4AO5 A;  1DUP A;  2BAZ A;  2PY4 A;  1MQ7 A;  3HHQ A;  1F7P A;  3I93 A;  3T64 A;  1DUC A;  2J4H A;  2PC5 A;  2OKE A;  3ARN A;  5ECT A;  3TPN A;  2D4N A;  2HQU A;  2BSY A;  1F7N A;  1EUW A;  3TQ3 A;  1DUN A;  3T6Y A;  1SNF A;  3TPW A;  4DHK A;  2D4L A;  1PKH A;  3TQZ A;  2QLP A;  1F7O A;  1F7R A;  3ZF2 A;  1SLH A;  2J4Q A;  4GCY A;  3T70 A;  2WE3 A;  3ARA A;  3ZF0 A;  3ZF3 A;  3EHW A;  2OL0 A;  2HXB A;  4AOZ A;  1XS4 A;  3T60 A;  2OL1 A;  2OKB A;  2WE1 A;  3H6X A;  1TUL A;  2HR6 A;  4GV8 A;  3SO2 A;  2Y1T A;  3HZA A;  3TPY A;  2WE0 A;  1RN8 A;  3H6D A;  2XCE A;  3TRN A;  3ZF1 A;  4LHR A;  1SEH A;  5CCO A;  3MDX A;  3TQ4 A;  2XCD A;  3TSL A;  3C2T A;  3TTA A;  1SMC A;  4XJC A;  2XY3 A;  1RNJ A;  3P48 A;  1DUD A;  1Q5U X;  3KM3 A;  1DUT A;  1SIX A;  3LOJ A;  3ZEZ A;  1PKK A;  1F7D A;  1PKJ A;  2HXD A;  5CCT A;  3ZF5 A;  3TPS A;  2ZDC A;  2HRM A;  1VYQ A;  3TQ5 A;  4AOO A;  1SM8 A;  1EU5 A;  1SYL A;  4GK6 A;  3TRL A;  1Q5H A;  4OOQ A;  1XS1 A;  3LQW A;  4WRK A;  4B0H A;  2BT1 A;  3TP1 A;  1OGH A;  2WE2 A;  3ZF6 A;  3MBQ A;  2XX6 A;  3ZF4 A;  3ECY A;  4A6A A;  3CA9 A;  3C3I A;  3F4F A;  4APZ 1;  2V9X A;  2Y8C A;  5F9K A;  1XS6 A;  2OKD A;  2QXX A;  4OOP A;  1F7K A;  1SJN A;  3TS6 A;  1F7Q A;  5EDD A;  2D4M A;  2YZJ A;  3GF0 A;  2R9Q A; 
#chains in the Genus database with same CATH homology
 4AO5 A;  1DUP A;  2BAZ A;  2PY4 A;  1MQ7 A;  3HHQ A;  1F7P A;  3I93 A;  3T64 A;  1DUC A;  2J4H A;  2PC5 A;  2OKE A;  3ARN A;  5ECT A;  3TPN A;  2D4N A;  2HQU A;  2BSY A;  1F7N A;  1EUW A;  3TQ3 A;  1DUN A;  3T6Y A;  1SNF A;  3TPW A;  4DHK A;  2D4L A;  1PKH A;  3TQZ A;  2QLP A;  1F7O A;  1F7R A;  3ZF2 A;  1SLH A;  2J4Q A;  4GCY A;  3T70 A;  2WE3 A;  3ARA A;  3ZF0 A;  3ZF3 A;  3EHW A;  2OL0 A;  2HXB A;  4AOZ A;  1XS4 A;  3T60 A;  2OL1 A;  2OKB A;  2WE1 A;  3H6X A;  2HR6 A;  4GV8 A;  3SO2 A;  2Y1T A;  3HZA A;  3TPY A;  2WE0 A;  1RN8 A;  3H6D A;  2XCE A;  3TRN A;  3ZF1 A;  4LHR A;  1SEH A;  5CCO A;  3MDX A;  3TQ4 A;  2XCD A;  3TSL A;  3C2T A;  3TTA A;  1SMC A;  4XJC A;  2XY3 A;  1RNJ A;  3P48 A;  1DUD A;  1Q5U X;  3KM3 A;  1DUT A;  1SIX A;  3LOJ A;  3ZEZ A;  1PKK A;  1F7D A;  1PKJ A;  2HXD A;  5CCT A;  3ZF5 A;  3TPS A;  2ZDC A;  2HRM A;  1VYQ A;  3TQ5 A;  4AOO A;  1SM8 A;  1EU5 A;  1SYL A;  4GK6 A;  3TRL A;  1Q5H A;  4OOQ A;  1XS1 A;  3LQW A;  4WRK A;  4B0H A;  2BT1 A;  3TP1 A;  1OGH A;  2WE2 A;  3ZF6 A;  3MBQ A;  2XX6 A;  3ZF4 A;  3ECY A;  4A6A A;  3CA9 A;  3C3I A;  3F4F A;  4APZ 1;  2V9X A;  2Y8C A;  5F9K A;  1XS6 A;  2OKD A;  2QXX A;  4OOP A;  1F7K A;  1SJN A;  3TS6 A;  1F7Q A;  5EDD A;  2D4M A;  2YZJ A;  3GF0 A;  2R9Q A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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