4A0IA

Crystal structure of survivin bound to the n-terminal tail of hsgo1
Total Genus 46
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
46
sequence length
136
structure length
136
Chain Sequence
TLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDPIEEHKKHSSGCAFLSVKKQFEELTLGEFLKLDRERAKNKIAKETNNKKKEFEETAKKVRRAIEQLAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Cell cycle
molecule keywords BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 5
publication title Structural Basis for the Recognition of Phosphorylated Histone H3 by the Survivin Subunit of the Chromosomal Passenger Complex.
pubmed doi rcsb
total genus 46
structure length 136
sequence length 136
chains with identical sequence B
ec nomenclature
pdb deposition date 2011-09-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00653 BIR Inhibitor of Apoptosis domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1170.10 Mainly Alpha Orthogonal Bundle Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A 4a0iA00
1SE0A 3UIIA 2QFAA 3M0DD 3F7IA 4KMNA 1SDZA 1E31A 3UEDA 4EC4A 5C7CA 1QBHA 1JD4A 3GTAA 4J45A 4WVSA 5C84A 2QRAA 4A0IA 3CM7A 3MUPA 1OY7A 3SIQA 5C0KA 4A0NA 5C0LA 4LGEA 5C7AA 1JD6A 1I3OE 4J44A 4HY4A 3GT9A 3CM2A 1G73C 3SIPE 2OPZA 3D9TA 1NW9A 1TFTA 3UEIA 5C3KA 5C7DA 5C7BA 3UEHA 3UW5A 1XB1A 4KJVA 1TW6A 2POPB 4A0JA 4OXCA 2OPYA 4LGUA 3UIGA 2I3HA 3UEEA 4HY0A 3M1DA 4WVUA 3UEGA 4HY5A 3UEFA 4EB9A 2VSLA 2VM5A 1F3HA 1F9XA 3EYLA 3UW4A 1XB0A 3M0AD 3CLXA 3F7GA 1TFQA 3UIHA 1OXQA 3UIJA 2I3IA 1XOXA 4MTIA 4J3YA 1G3FA 2UVLA 2RAWA 1C9QA 1OXNA 2RAXA 1JD5A 3UIKA 2POIA 4KMPA 4MTZA 5C83A 3OZ1A 3T6PA 1M4MA 4J48A 1Q4QA 3G76A 4J46A 4J47A 4WVTA 3HL5A 3UECA 4MU7A 3D9UA 3F7HA 5C3HA 2JK7A 4KJUA
chains in the Genus database with same CATH superfamily
1SE0A 3UIIA 2QFAA 3M0DD 3F7IA 4KMNA 1SDZA 1E31A 3UEDA 4EC4A 5C7CA 1QBHA 1JD4A 3GTAA 4J45A 4WVSA 5C84A 2QRAA 4A0IA 3CM7A 3MUPA 1OY7A 3SIQA 5C0KA 4A0NA 5C0LA 4LGEA 5C7AA 1JD6A 1I3OE 4J44A 4HY4A 3GT9A 3CM2A 1G73C 3SIPE 2OPZA 3D9TA 1NW9A 1TFTA 3UEIA 5C3KA 5C7DA 5C7BA 3UEHA 3UW5A 1XB1A 4KJVA 1TW6A 2POPB 4A0JA 4OXCA 2OPYA 4LGUA 3UIGA 2I3HA 3UEEA 4HY0A 3M1DA 4WVUA 3UEGA 4HY5A 3UEFA 4EB9A 2VSLA 2VM5A 1F3HA 1F9XA 3EYLA 3UW4A 1XB0A 3M0AD 3CLXA 3F7GA 1TFQA 3UIHA 1OXQA 3UIJA 2I3IA 1XOXA 4MTIA 4J3YA 1G3FA 2UVLA 2RAWA 1C9QA 1OXNA 2RAXA 1JD5A 3UIKA 2POIA 4KMPA 4MTZA 5C83A 3OZ1A 3T6PA 1M4MA 4J48A 1Q4QA 3G76A 4J46A 4J47A 4WVTA 3HL5A 3UECA 4MU7A 3D9UA 3F7HA 5C3HA 2JK7A 4KJUA
chains in the Genus database with same CATH topology
1SE0A 3UIIA 2QFAA 3M0DD 3F7IA 4KMNA 1SDZA 1E31A 3UEDA 4EC4A 5C7CA 1QBHA 1JD4A 3GTAA 4J45A 4WVSA 5C84A 2QRAA 4A0IA 3CM7A 3MUPA 1OY7A 3SIQA 5C0KA 4A0NA 5C0LA 4LGEA 5C7AA 1JD6A 1I3OE 4J44A 4HY4A 3GT9A 3CM2A 1G73C 3SIPE 2OPZA 3D9TA 1NW9A 1TFTA 3UEIA 5C3KA 5C7DA 5C7BA 3UEHA 3UW5A 1XB1A 4KJVA 1TW6A 2POPB 4A0JA 4OXCA 2OPYA 4LGUA 3UIGA 2I3HA 3UEEA 4HY0A 3M1DA 4WVUA 3UEGA 4HY5A 3UEFA 4EB9A 2VSLA 2VM5A 1F3HA 1F9XA 3EYLA 3UW4A 1XB0A 3M0AD 3CLXA 3F7GA 1TFQA 3UIHA 1OXQA 3UIJA 2I3IA 1XOXA 4MTIA 4J3YA 1G3FA 2UVLA 2RAWA 1C9QA 1OXNA 2RAXA 1JD5A 3UIKA 2POIA 4KMPA 4MTZA 5C83A 3OZ1A 3T6PA 1M4MA 4J48A 1Q4QA 3G76A 4J46A 4J47A 4WVTA 3HL5A 3UECA 4MU7A 3D9UA 3F7HA 5C3HA 2JK7A 4KJUA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1SE0 A;  3UII A;  2QFA A;  3M0D D;  3F7I A;  4KMN A;  1SDZ A;  1E31 A;  3UED A;  4EC4 A;  5C7C A;  1QBH A;  1JD4 A;  3GTA A;  4J45 A;  4WVS A;  5C84 A;  2QRA A;  4A0I A;  3CM7 A;  3MUP A;  1OY7 A;  3SIQ A;  5C0K A;  4A0N A;  5C0L A;  4LGE A;  5C7A A;  1JD6 A;  1I3O E;  4J44 A;  4HY4 A;  3GT9 A;  3CM2 A;  1G73 C;  3SIP E;  2OPZ A;  3D9T A;  1NW9 A;  1TFT A;  3UEI A;  5C3K A;  5C7D A;  5C7B A;  3UEH A;  3UW5 A;  1XB1 A;  4KJV A;  1TW6 A;  2POP B;  4A0J A;  4OXC A;  2OPY A;  4LGU A;  3UIG A;  2I3H A;  3UEE A;  4HY0 A;  3M1D A;  4WVU A;  3UEG A;  4HY5 A;  3UEF A;  4EB9 A;  2VSL A;  2VM5 A;  1F3H A;  1F9X A;  3EYL A;  3UW4 A;  1XB0 A;  3M0A D;  3CLX A;  3F7G A;  1TFQ A;  3UIH A;  1OXQ A;  3UIJ A;  2I3I A;  1XOX A;  4MTI A;  4J3Y A;  1G3F A;  2UVL A;  2RAW A;  1C9Q A;  1OXN A;  2RAX A;  1JD5 A;  3UIK A;  2POI A;  4KMP A;  4MTZ A;  5C83 A;  3OZ1 A;  3T6P A;  1M4M A;  4J48 A;  1Q4Q A;  3G76 A;  4J46 A;  4J47 A;  4WVT A;  3HL5 A;  3UEC A;  4MU7 A;  3D9U A;  3F7H A;  5C3H A;  2JK7 A;  4KJU A; 
#chains in the Genus database with same CATH topology
 1SE0 A;  3UII A;  2QFA A;  3M0D D;  3F7I A;  4KMN A;  1SDZ A;  1E31 A;  3UED A;  4EC4 A;  5C7C A;  1QBH A;  1JD4 A;  3GTA A;  4J45 A;  4WVS A;  5C84 A;  2QRA A;  4A0I A;  3CM7 A;  3MUP A;  1OY7 A;  3SIQ A;  5C0K A;  4A0N A;  5C0L A;  4LGE A;  5C7A A;  1JD6 A;  1I3O E;  4J44 A;  4HY4 A;  3GT9 A;  3CM2 A;  1G73 C;  3SIP E;  2OPZ A;  3D9T A;  1NW9 A;  1TFT A;  3UEI A;  5C3K A;  5C7D A;  5C7B A;  3UEH A;  3UW5 A;  1XB1 A;  4KJV A;  1TW6 A;  2POP B;  4A0J A;  4OXC A;  2OPY A;  4LGU A;  3UIG A;  2I3H A;  3UEE A;  4HY0 A;  3M1D A;  4WVU A;  3UEG A;  4HY5 A;  3UEF A;  4EB9 A;  2VSL A;  2VM5 A;  1F3H A;  1F9X A;  3EYL A;  3UW4 A;  1XB0 A;  3M0A D;  3CLX A;  3F7G A;  1TFQ A;  3UIH A;  1OXQ A;  3UIJ A;  2I3I A;  1XOX A;  4MTI A;  4J3Y A;  1G3F A;  2UVL A;  2RAW A;  1C9Q A;  1OXN A;  2RAX A;  1JD5 A;  3UIK A;  2POI A;  4KMP A;  4MTZ A;  5C83 A;  3OZ1 A;  3T6P A;  1M4M A;  4J48 A;  1Q4Q A;  3G76 A;  4J46 A;  4J47 A;  4WVT A;  3HL5 A;  3UEC A;  4MU7 A;  3D9U A;  3F7H A;  5C3H A;  2JK7 A;  4KJU A; 
#chains in the Genus database with same CATH homology
 1SE0 A;  3UII A;  2QFA A;  3M0D D;  3F7I A;  4KMN A;  1SDZ A;  1E31 A;  3UED A;  4EC4 A;  5C7C A;  1QBH A;  1JD4 A;  3GTA A;  4J45 A;  4WVS A;  5C84 A;  2QRA A;  4A0I A;  3CM7 A;  3MUP A;  1OY7 A;  3SIQ A;  5C0K A;  4A0N A;  5C0L A;  4LGE A;  5C7A A;  1JD6 A;  1I3O E;  4J44 A;  4HY4 A;  3GT9 A;  3CM2 A;  1G73 C;  3SIP E;  2OPZ A;  3D9T A;  1NW9 A;  1TFT A;  3UEI A;  5C3K A;  5C7D A;  5C7B A;  3UEH A;  3UW5 A;  1XB1 A;  4KJV A;  1TW6 A;  2POP B;  4A0J A;  4OXC A;  2OPY A;  4LGU A;  3UIG A;  2I3H A;  3UEE A;  4HY0 A;  3M1D A;  4WVU A;  3UEG A;  4HY5 A;  3UEF A;  4EB9 A;  2VSL A;  2VM5 A;  1F3H A;  1F9X A;  3EYL A;  3UW4 A;  1XB0 A;  3M0A D;  3CLX A;  3F7G A;  1TFQ A;  3UIH A;  1OXQ A;  3UIJ A;  2I3I A;  1XOX A;  4MTI A;  4J3Y A;  1G3F A;  2UVL A;  2RAW A;  1C9Q A;  1OXN A;  2RAX A;  1JD5 A;  3UIK A;  2POI A;  4KMP A;  4MTZ A;  5C83 A;  3OZ1 A;  3T6P A;  1M4M A;  4J48 A;  1Q4Q A;  3G76 A;  4J46 A;  4J47 A;  4WVT A;  3HL5 A;  3UEC A;  4MU7 A;  3D9U A;  3F7H A;  5C3H A;  2JK7 A;  4KJU A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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