4A3MC

Rna polymerase ii initial transcribing complex with a 4nt dna-rna hybrid and soaked with ampcpp
Total Genus 60
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
60
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural basis of initial RNA polymerase II transcription.
pubmed doi rcsb
molecule tags Transcription
molecule keywords DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
total genus 60
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4a3mC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4a3mC01
1ZYRA 3S1MK 4C3IC 4A3BC 5TMCA 3GTLC 1XPPA 2R7ZK 5C4JC 3GTPK 4A3KK 2PA8L 1WCMK 4A3JK 2E2HK 3S1RC 2JA8C 2R7ZC 4A3EK 3GTLK 2B63K 1I6HK 1R9TC 3GTJK 4A3FC 3S1NK 2R93C 1Y1WC 4X6AC 2VUMC 2NVQK 5IYBK 4BY7K 4QIWL 2WB1D 1Y1VC 3HOZK 3GTMK 2WAQL 3RZOK 3GTGK 4YFNA 3I4MC 3S16C 2E2JK 2JA7C 4MQ9A 3M3YC 1TWGK 3S1QK 3S2DK 4LLGA 2A6HA 2NVQC 4BY7C 3HOUK 2E2IC 4BXXC 1TWFK 5M5XK 4Y7NK 3M3YK 4Y52K 3K7AC 2NVXK 2PPBA 3I4NC 1K83C 4MEXA 3GTKC 5C4XC 5IP9K 3S17K 3RZOC 4KN4A 3M4OC 3S2HK 3DXJA 4G7HA 3S1MC 4GZYA 3K7AK 4YFXA 3HOYC 4C3JC 4AYBD 1I3QK 4YG2A 5C3EC 2B63C 3S2DC 1I6HC 3S1QC 5IYCK 1TWAC 4A3GK 5FJ8K 5IP7K 3GTPC 5C4JK 4A3MK 4A3CC 4QJVA 3HOXK 2A69A 3EQLA 5IP9C 1K83K 2NVYC 1SFOK 1YNNA 3HOWK 2PA8D 3GTQC 2JA6C 3RZDC 3HOUC 2WAQD 5C3EK 1I3QC 4OIRA 1TWCK 4C3JK 4X6AK 2JA6K 5C44C 4BY1C 4OIQA 2O5IA 4MEYA 5M5WK 3GTQK 2E2JC 4A3DC 1SMYA 3I4MK 4QIWD 4A3CK 2NVTC 3GTMC 3S14C 3S2HC 4A93C 3M4OK 3PO3C 5IYCC 3WODA 2NVTK 3S14K 1I6VA 3S15C 4A93K 5M3FK 2BE5A 4BBRC 5C44K 3S1NC 5M3MK 4Y52C 4Y7NC 4A3FK 4BY1K 4LJZA 4BXXK 3H3VD 3RZDK 3S1RK 2JA8K 4A3JC 2E2HC 4BBSK 2Y0SL 4A3LC 3HOVC 3HOXC 4AYBL 4Q5SA 2CW0A 4A3DK 5TMFA 4XLPA 3PO2C 3HOYK 4JK1A 4XSZA 2R92K 5IYDK 1SFOC 3HOWC 4C3HK 2A6EA 5M5YK 5FLMK 3GTGC 4LK0A 1YNJA 2PMZL 3HOVK 4A3EC 4A3MC 5IP7C 4LK1A 4C3HC 5D4DA 5FLMC 3HOZC 1TWHC 3CQZC 3H3VL 4OIPA 4C3IK 3PO2K 2YU9C 4A3BK 3I4NK 2NVXC 3GTOK 4G7ZA 3H0GK 3GTJC 1R9TK 4QJVB 2YU9K 4A3IC 3S15K 1I50K 4A3LK 3HKZD 4BBSC 1HQMA 4NOIA 3S16K 4ZH4A 1I50C 4A3IK 4G7OA 4KN7A 3S17C 5C4XK 2WB1L 3GTKK 1Y1WK 3GTOC 4C2MC 4OIOA 1TWFC 2O5JA 2E2IK 2PMZD 4OINA 5IYBC 1IW7A 2VUMK 3CQZK 4C2MK 1TWHK 2A68A 1TWGC 2JA7K 3PO3K 2JA5K 4KMUA 4XSXA 2JA5C 1WCMC 4A3GC 4A3KC 5IYDC 1TWAK 2R92C 2Y0SD 1Y1VK 4XLNA 1TWCC 3FKIK 3H0GC 4YFKA 3HKZL 2R93K 1BDFA 4BBRK 2NVYK 4Q4ZA 3FKIC
chains in the Genus database with same CATH superfamily
1BGWA 4C3IC 3GTLC 2R7ZK 2E2HK 1BS2A 2JA8C 3NUHA 2B63K 3L4KA 1R9TC 1J6XA 4ILDA 3A8IA 4X6AC 4BY7K 2B63A 2WB1D 3AD8C 3FOFA 3HOZK 3GTMK 2WAQL 4LR2A 1L0WA 3TTGA 3GTGK 3I4MC 5IOTA 2E2JK 1ZQ1C 1O29A 3S2DK 1TWFK 2XCQA 2CFAA 1WOOA 1BJTA 5IP9K 5C4XC 3S17K 3RZOC 2E2HA 3TFJA 3T00A 4G7HA 3S1MC 3HXAA 4C3JC 4AYBD 1I6HC 1XZPA 5FJ8K 3GTPC 5C4JK 4A3CC 1DD5A 5IP9C 1J6VA 4OIRA 1TWCK 2V6SA 2JA6K 5CHPA 3GDZA 2E2JC 4A3DC 1SMYA 3I4MK 1JQWA 1EI6A 1I3QA 3L4JA 2NVTK 4GTDA 4KMHA 4WFNS 1YX2A 5C44K 2ZJRS 3H3VD 5EGEA 2JA8K 2E2HC 3JSTA 2JH3A 3BP8C 4O2DA 3HOVC 3HOXC 1PJ6A 1XZQA 4A3DK 1I50A 5TMFA 4BLBA 1C0AA 4XSZA 1EQRA 5FLMK 4KC6A 4A3MC 1UV7A 1JOEA 1O27A 2RGRA 3DLLS 3H3VL 4WJ4A 3TFHA 3I4NK 1WQHA 2NVXC 1F9NA 1R9TA 3H0GK 1K83A 2YU9A 4WFBS 1EK8A 4KATA 1I50C 3S17C 2KQ1A 2WB1L 5C4XK 3GTOC 1PJ5A 1ZXOA 2O5JA 1TWFC 2P5MA 1VGXA 3MMLB 1TWHK 1B4AA 1FEUA 5IYDC 2R92C 2Y0SD 1TWCC 1WOSA 2P8TA 2NVXA 3HKZL 1VH2A 3FKIC 4A3BC 1XZQB 1DCOA 5C4JC 3GTPK 2PA8L 1WCMK 4A3JK 3S1RC 1USOA 4A3EK 4IO9S 3GTLK 1XXCA 2GAHC 4A3FC 2ZJPS 2R93C 2NVQK 2XCRB 1TWGA 3RZOK 4WILA 1J6WA 3GTMA 3S16C 1AB4A 4MQ9A 2ZUEA 3LAPA 4LLGA 3BUEA 4Y7NK 4Y52K 2NVXK 3AQPA 4PABA 3M4OC 3S2HK 3PIPS 3CQZA 4GZYA 1WQGA 1O2AA 3K7AK 3ERED 2W7VA 3CAGA 1I3QK 4YG2A 5C3EC 5JVGS 2B63C 3S2DC 3AQOA 4WJ3M 3FKIA 4M1XA 4A3GK 4KMDA 5DM6S 3HOXK 2A69A 2XCOA 1HI9A 1YNNA 3AD7C 3GTQC 4KDDA 3HOWK 2JA6C 3RZDC 3N0CA 5C3EK 2E2IA 4BLAA 5C44C 1O26A 1Y1WA 3FHZA 1WQFA 4QIWD 2NVTC 3S2HC 1WSVA 2GSNA 3M4OK 3PO3C 5HL7S 3S15C 3V4GA 5M3MK 2GSOA 4BXXK 3S1RK 4A3JC 4GTAA 1WIHA 4KAWX 2JA6A 1F7VA 3GEIA 3PO2C 4P5BA 3GEHA 4FM9A 1SFOC 3GTGC 4LK0A 1YNJA 2GSUA 5IP7C 4C3HC 5D4DA 3HOZC 1Y1VA 4J3NA 1TWHC 3CQZC 3PO2K 3GTOK 4G7ZA 3GTJC 1ISEA 2YU9K 4RMFA 5JFEA 4A3IC 1I50K 3GEEA 3HKZD 4NOIA 3T01A 5IORA 5HQHA 1IE0A 3GTJA 1YCLA 1X31C 1IW7A 2VUMK 1TWGC 2JA7K 1TWHA 3G4CA 3CF5S 3A8KA 3OREA 2JA5C 2FQOA 2R93A 4GTCA 1F93A 3H0GC 4YFKA 2R93K 3BP3A 1WORA 5L46A 1ZYRA 3S1MK 1O2FB 3OPFA 3T02A 3OEPA 3GTJK 4IOCS 1B4BA 2VUMC 5IOQA 5IOSA 3A8JA 3SZZA 1EFWA 3M3YC 4GTFA 4DDQA 5TJ3A 4BY7C 3HOUK 2E2IC 5M5XK 3GTKA 3K7AC 3GTQA 1K83C 4BKWA 4G0VA 2JA7A 1GE9A 3DXJA 4C45A 3PIOS 1V5VA 3S1QC 3QX3A 5IYCK 3GIRA 1IS1A 4A3MK 4QJVA 1J98A 1K83K 1G51A 2NVYC 2R7ZA 1INNA 3LAJA 1KQ4A 1VJEA 3HOUC 4C3JK 5M5WK 3GTQK 2O5IA 2VUMA 4MEYA 3GTMC 3S14K 4A93K 3LYWA 5M3FK 4BBRC 4BY1K 3TFIA 3H0GA 3RZDK 2Y0SL 4A3LC 4Q4ZA 2FQTA 2V6UA 4AYBL 4Q5SA 2CW0A 1O25A 3SZYA 4FZBA 3HOYK 2A6EA 4GTLA 2PMZL 4G0UA 4LK1A 5FLMC 1VRQC 1DCPA 4OIPA 4C3IK 4KMAA 4G0WA 5JVOA 3VA7A 1PJ7A 3GTOA 4QJVB 3S15K 4A3LK 1HQMA 3S16K 4ZH4A 5EGHA 4A3IK 4KN7A 2L3UA 4IOAS 2E2IK 2D6FC 2PMZD 5IYBC 3CQZK 4C2MK 2A68A 3LPXA 1WCMC 4A3GC 4A3KC 4WF9S 1TWAK 4XLNA 4WFAS 3FKIK 1BDFA 4BBRK 2NVYK 1TWAA 5TMCA 1XPPA 3ADAC 3AD9C 4A3KK 2R7ZC 2NVYA 1I6HK 1IL2A 3S1NK 1O24A 4P9SA 5IYBK 4QIWL 3N3YA 1Y1VC 4KARA 1USMA 1XXBA 4YFNA 2JA7C 1TWGK 1ZVUA 2Y3PA 3S1QK 2A6HA 2NVQC 1IBAA 4BXXC 3M3YK 2PPBA 3I4NC 2EBBA 4PAAA 4MEXA 3GTKC 4AH6A 1WSRA 4KN4A 3GTPA 3AH5A 4YFXA 2PHCB 3N0BA 3HOYC 5DM7S 1TWAC 5IP7K 1WOPA 3EQLA 4GTBA 1SFOK 2PA8D 4KASA 1WCMA 2KXYA 2WAQD 1I3QC 1IQ0A 4LOWA 4X6AK 4BY1C 4OIQA 5CJ9A 1VLOA 4A3CK 4WCES 3S14C 4A93C 5IYCC 3WODA 1I6VA 2JA5A 2BE5A 3S1NC 4Y52C 4Y7NC 4A3FK 4LJZA 3Q3QA 4KB4A 4BBSK 1ZBSA 3FOEA 1JVIA 3GTLA 2KPUA 1F7UA 4XLPA 4KM9A 4GFQA 4KM8A 3S0XA 2GAGC 4JK1A 2R92K 2ZFZA 5IYDK 3HOWC 5M5YK 2RH6A 4GT9A 4C3HK 1EH1A 5E68A 3HOVK 4A3EC 2KWAA 1XXAA 2ZUFA 3GSIA 4A3BK 2YU9C 5JVHS 3GTGA 4U67S 1SFOA 2ZJQS 1R9TK 4BBSC 4GTEA 1O2BA 4G7OA 3GTKK 1Y1WK 4C2MC 4OIOA 2L5NA 1TWCA 4OINA 2V6TA 2R92A 5HL8A 3PO3K 4LQYA 2JA5K 4KMUA 3IPJA 1DCHA 4XSXA 3G4AA 1XZPB 1Y1VK 1O28A 1TWFA 1RU0A 4XCHA 4P5AA 1Y1WC 4KB2A 2CFAB
chains in the Genus database with same CATH topology
1ZYRA 3S1MK 4C3IC 4A3BC 5TMCA 3GTLC 1XPPA 2R7ZK 5C4JC 3GTPK 4A3KK 2PA8L 1WCMK 4A3JK 2E2HK 3S1RC 2JA8C 2R7ZC 4A3EK 3GTLK 2B63K 1I6HK 1R9TC 3GTJK 4A3FC 3S1NK 2R93C 1Y1WC 4X6AC 2VUMC 2NVQK 5IYBK 4BY7K 4QIWL 2WB1D 1Y1VC 3HOZK 3GTMK 2WAQL 3RZOK 3GTGK 4YFNA 3I4MC 3S16C 2E2JK 2JA7C 4MQ9A 3M3YC 1TWGK 3S1QK 3S2DK 4LLGA 2A6HA 2NVQC 4BY7C 3HOUK 2E2IC 4BXXC 1TWFK 5M5XK 4Y7NK 3M3YK 4Y52K 3K7AC 2NVXK 2PPBA 3I4NC 1K83C 4MEXA 3GTKC 5C4XC 5IP9K 3S17K 3RZOC 4KN4A 3M4OC 3S2HK 3DXJA 4G7HA 3S1MC 4GZYA 3K7AK 4YFXA 3HOYC 4C3JC 4AYBD 1I3QK 4YG2A 5C3EC 2B63C 3S2DC 1I6HC 3S1QC 5IYCK 1TWAC 4A3GK 5FJ8K 5IP7K 3GTPC 5C4JK 4A3MK 4A3CC 4QJVA 3HOXK 2A69A 3EQLA 5IP9C 1K83K 2NVYC 1SFOK 1YNNA 3HOWK 2PA8D 3GTQC 2JA6C 3RZDC 3HOUC 2WAQD 5C3EK 1I3QC 4OIRA 1TWCK 4C3JK 4X6AK 2JA6K 5C44C 4BY1C 4OIQA 2O5IA 4MEYA 5M5WK 3GTQK 2E2JC 4A3DC 1SMYA 3I4MK 4QIWD 4A3CK 2NVTC 3GTMC 3S14C 3S2HC 4A93C 3M4OK 3PO3C 5IYCC 3WODA 2NVTK 3S14K 1I6VA 3S15C 4A93K 5M3FK 2BE5A 4BBRC 5C44K 3S1NC 5M3MK 4Y52C 4Y7NC 4A3FK 4BY1K 4LJZA 4BXXK 3H3VD 3RZDK 3S1RK 2JA8K 4A3JC 2E2HC 4BBSK 2Y0SL 4A3LC 3HOVC 3HOXC 4AYBL 4Q5SA 2CW0A 4A3DK 5TMFA 4XLPA 3PO2C 3HOYK 4JK1A 4XSZA 2R92K 5IYDK 1SFOC 3HOWC 4C3HK 2A6EA 5M5YK 5FLMK 3GTGC 4LK0A 1YNJA 2PMZL 3HOVK 4A3EC 4A3MC 5IP7C 4LK1A 4C3HC 5D4DA 5FLMC 3HOZC 1TWHC 3CQZC 3H3VL 4OIPA 4C3IK 3PO2K 2YU9C 4A3BK 3I4NK 2NVXC 3GTOK 4G7ZA 3H0GK 3GTJC 1R9TK 4QJVB 2YU9K 4A3IC 3S15K 1I50K 4A3LK 3HKZD 4BBSC 1HQMA 4NOIA 3S16K 4ZH4A 1I50C 4A3IK 4G7OA 4KN7A 3S17C 5C4XK 2WB1L 3GTKK 1Y1WK 3GTOC 4C2MC 4OIOA 1TWFC 2O5JA 2E2IK 2PMZD 4OINA 5IYBC 1IW7A 2VUMK 3CQZK 4C2MK 1TWHK 2A68A 1TWGC 2JA7K 3PO3K 2JA5K 4KMUA 4XSXA 2JA5C 1WCMC 4A3GC 4A3KC 5IYDC 1TWAK 2R92C 2Y0SD 1Y1VK 4XLNA 1TWCC 3FKIK 3H0GC 4YFKA 3HKZL 2R93K 1BDFA 4BBRK 2NVYK 4Q4ZA 3FKIC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1ZYR A;  3S1M K;  4C3I C;  4A3B C;  5TMC A;  3GTL C;  1XPP A;  2R7Z K;  5C4J C;  3GTP K;  4A3K K;  2PA8 L;  1WCM K;  4A3J K;  2E2H K;  3S1R C;  2JA8 C;  2R7Z C;  4A3E K;  3GTL K;  2B63 K;  1I6H K;  1R9T C;  3GTJ K;  4A3F C;  3S1N K;  2R93 C;  1Y1W C;  4X6A C;  2VUM C;  2NVQ K;  5IYB K;  4BY7 K;  4QIW L;  2WB1 D;  1Y1V C;  3HOZ K;  3GTM K;  2WAQ L;  3RZO K;  3GTG K;  4YFN A;  3I4M C;  3S16 C;  2E2J K;  2JA7 C;  4MQ9 A;  3M3Y C;  1TWG K;  3S1Q K;  3S2D K;  4LLG A;  2A6H A;  2NVQ C;  4BY7 C;  3HOU K;  2E2I C;  4BXX C;  1TWF K;  5M5X K;  4Y7N K;  3M3Y K;  4Y52 K;  3K7A C;  2NVX K;  2PPB A;  3I4N C;  1K83 C;  4MEX A;  3GTK C;  5C4X C;  5IP9 K;  3S17 K;  3RZO C;  4KN4 A;  3M4O C;  3S2H K;  3DXJ A;  4G7H A;  3S1M C;  4GZY A;  3K7A K;  4YFX A;  3HOY C;  4C3J C;  4AYB D;  1I3Q K;  4YG2 A;  5C3E C;  2B63 C;  3S2D C;  1I6H C;  3S1Q C;  5IYC K;  1TWA C;  4A3G K;  5FJ8 K;  5IP7 K;  3GTP C;  5C4J K;  4A3M K;  4A3C C;  4QJV A;  3HOX K;  2A69 A;  3EQL A;  5IP9 C;  1K83 K;  2NVY C;  1SFO K;  1YNN A;  3HOW K;  2PA8 D;  3GTQ C;  2JA6 C;  3RZD C;  3HOU C;  2WAQ D;  5C3E K;  1I3Q C;  4OIR A;  1TWC K;  4C3J K;  4X6A K;  2JA6 K;  5C44 C;  4BY1 C;  4OIQ A;  2O5I A;  4MEY A;  5M5W K;  3GTQ K;  2E2J C;  4A3D C;  1SMY A;  3I4M K;  4QIW D;  4A3C K;  2NVT C;  3GTM C;  3S14 C;  3S2H C;  4A93 C;  3M4O K;  3PO3 C;  5IYC C;  3WOD A;  2NVT K;  3S14 K;  1I6V A;  3S15 C;  4A93 K;  5M3F K;  2BE5 A;  4BBR C;  5C44 K;  3S1N C;  5M3M K;  4Y52 C;  4Y7N C;  4A3F K;  4BY1 K;  4LJZ A;  4BXX K;  3H3V D;  3RZD K;  3S1R K;  2JA8 K;  4A3J C;  2E2H C;  4BBS K;  2Y0S L;  4A3L C;  3HOV C;  3HOX C;  4AYB L;  4Q5S A;  2CW0 A;  4A3D K;  5TMF A;  4XLP A;  3PO2 C;  3HOY K;  4JK1 A;  4XSZ A;  2R92 K;  5IYD K;  1SFO C;  3HOW C;  4C3H K;  2A6E A;  5M5Y K;  5FLM K;  3GTG C;  4LK0 A;  1YNJ A;  2PMZ L;  3HOV K;  4A3E C;  4A3M C;  5IP7 C;  4LK1 A;  4C3H C;  5D4D A;  5FLM C;  3HOZ C;  1TWH C;  3CQZ C;  3H3V L;  4OIP A;  4C3I K;  3PO2 K;  2YU9 C;  4A3B K;  3I4N K;  2NVX C;  3GTO K;  4G7Z A;  3H0G K;  3GTJ C;  1R9T K;  4QJV B;  2YU9 K;  4A3I C;  3S15 K;  1I50 K;  4A3L K;  3HKZ D;  4BBS C;  1HQM A;  4NOI A;  3S16 K;  4ZH4 A;  1I50 C;  4A3I K;  4G7O A;  4KN7 A;  3S17 C;  5C4X K;  2WB1 L;  3GTK K;  1Y1W K;  3GTO C;  4C2M C;  4OIO A;  1TWF C;  2O5J A;  2E2I K;  2PMZ D;  4OIN A;  5IYB C;  1IW7 A;  2VUM K;  3CQZ K;  4C2M K;  1TWH K;  2A68 A;  1TWG C;  2JA7 K;  3PO3 K;  2JA5 K;  4KMU A;  4XSX A;  2JA5 C;  1WCM C;  4A3G C;  4A3K C;  5IYD C;  1TWA K;  2R92 C;  2Y0S D;  1Y1V K;  4XLN A;  1TWC C;  3FKI K;  3H0G C;  4YFK A;  3HKZ L;  2R93 K;  1BDF A;  4BBR K;  2NVY K;  4Q4Z A;  3FKI C; 
#chains in the Genus database with same CATH topology
 1BGW A;  4C3I C;  3GTL C;  2R7Z K;  2E2H K;  1BS2 A;  2JA8 C;  3NUH A;  2B63 K;  3L4K A;  1R9T C;  1J6X A;  4ILD A;  3A8I A;  4X6A C;  4BY7 K;  2B63 A;  2WB1 D;  3AD8 C;  3FOF A;  3HOZ K;  3GTM K;  2WAQ L;  4LR2 A;  1L0W A;  3TTG A;  3GTG K;  3I4M C;  5IOT A;  2E2J K;  1ZQ1 C;  1O29 A;  3S2D K;  1TWF K;  2XCQ A;  2CFA A;  1WOO A;  1BJT A;  5IP9 K;  5C4X C;  3S17 K;  3RZO C;  2E2H A;  3TFJ A;  3T00 A;  4G7H A;  3S1M C;  3HXA A;  4C3J C;  4AYB D;  1I6H C;  1XZP A;  5FJ8 K;  3GTP C;  5C4J K;  4A3C C;  1DD5 A;  5IP9 C;  1J6V A;  4OIR A;  1TWC K;  2V6S A;  2JA6 K;  5CHP A;  3GDZ A;  2E2J C;  4A3D C;  1SMY A;  3I4M K;  1JQW A;  1EI6 A;  1I3Q A;  3L4J A;  2NVT K;  4GTD A;  4KMH A;  4WFN S;  1YX2 A;  5C44 K;  2ZJR S;  3H3V D;  5EGE A;  2JA8 K;  2E2H C;  3JST A;  2JH3 A;  3BP8 C;  4O2D A;  3HOV C;  3HOX C;  1PJ6 A;  1XZQ A;  4A3D K;  1I50 A;  5TMF A;  4BLB A;  1C0A A;  4XSZ A;  1EQR A;  5FLM K;  4KC6 A;  4A3M C;  1UV7 A;  1JOE A;  1O27 A;  2RGR A;  3DLL S;  3H3V L;  4WJ4 A;  3TFH A;  3I4N K;  1WQH A;  2NVX C;  1F9N A;  1R9T A;  3H0G K;  1K83 A;  2YU9 A;  4WFB S;  1EK8 A;  4KAT A;  1I50 C;  3S17 C;  2KQ1 A;  2WB1 L;  5C4X K;  3GTO C;  1PJ5 A;  1ZXO A;  2O5J A;  1TWF C;  2P5M A;  1VGX A;  3MML B;  1TWH K;  1B4A A;  1FEU A;  5IYD C;  2R92 C;  2Y0S D;  1TWC C;  1WOS A;  2P8T A;  2NVX A;  3HKZ L;  1VH2 A;  3FKI C;  4A3B C;  1XZQ B;  1DCO A;  5C4J C;  3GTP K;  2PA8 L;  1WCM K;  4A3J K;  3S1R C;  1USO A;  4A3E K;  4IO9 S;  3GTL K;  1XXC A;  2GAH C;  4A3F C;  2ZJP S;  2R93 C;  2NVQ K;  2XCR B;  1TWG A;  3RZO K;  4WIL A;  1J6W A;  3GTM A;  3S16 C;  1AB4 A;  4MQ9 A;  2ZUE A;  3LAP A;  4LLG A;  3BUE A;  4Y7N K;  4Y52 K;  2NVX K;  3AQP A;  4PAB A;  3M4O C;  3S2H K;  3PIP S;  3CQZ A;  4GZY A;  1WQG A;  1O2A A;  3K7A K;  3ERE D;  2W7V A;  3CAG A;  1I3Q K;  4YG2 A;  5C3E C;  5JVG S;  2B63 C;  3S2D C;  3AQO A;  4WJ3 M;  3FKI A;  4M1X A;  4A3G K;  4KMD A;  5DM6 S;  3HOX K;  2A69 A;  2XCO A;  1HI9 A;  1YNN A;  3AD7 C;  3GTQ C;  4KDD A;  3HOW K;  2JA6 C;  3RZD C;  3N0C A;  5C3E K;  2E2I A;  4BLA A;  5C44 C;  1O26 A;  1Y1W A;  3FHZ A;  1WQF A;  4QIW D;  2NVT C;  3S2H C;  1WSV A;  2GSN A;  3M4O K;  3PO3 C;  5HL7 S;  3S15 C;  3V4G A;  5M3M K;  2GSO A;  4BXX K;  3S1R K;  4A3J C;  4GTA A;  1WIH A;  4KAW X;  2JA6 A;  1F7V A;  3GEI A;  3PO2 C;  4P5B A;  3GEH A;  4FM9 A;  1SFO C;  3GTG C;  4LK0 A;  1YNJ A;  2GSU A;  5IP7 C;  4C3H C;  5D4D A;  3HOZ C;  1Y1V A;  4J3N A;  1TWH C;  3CQZ C;  3PO2 K;  3GTO K;  4G7Z A;  3GTJ C;  1ISE A;  2YU9 K;  4RMF A;  5JFE A;  4A3I C;  1I50 K;  3GEE A;  3HKZ D;  4NOI A;  3T01 A;  5IOR A;  5HQH A;  1IE0 A;  3GTJ A;  1YCL A;  1X31 C;  1IW7 A;  2VUM K;  1TWG C;  2JA7 K;  1TWH A;  3G4C A;  3CF5 S;  3A8K A;  3ORE A;  2JA5 C;  2FQO A;  2R93 A;  4GTC A;  1F93 A;  3H0G C;  4YFK A;  2R93 K;  3BP3 A;  1WOR A;  5L46 A;  1ZYR A;  3S1M K;  1O2F B;  3OPF A;  3T02 A;  3OEP A;  3GTJ K;  4IOC S;  1B4B A;  2VUM C;  5IOQ A;  5IOS A;  3A8J A;  3SZZ A;  1EFW A;  3M3Y C;  4GTF A;  4DDQ A;  5TJ3 A;  4BY7 C;  3HOU K;  2E2I C;  5M5X K;  3GTK A;  3K7A C;  3GTQ A;  1K83 C;  4BKW A;  4G0V A;  2JA7 A;  1GE9 A;  3DXJ A;  4C45 A;  3PIO S;  1V5V A;  3S1Q C;  3QX3 A;  5IYC K;  3GIR A;  1IS1 A;  4A3M K;  4QJV A;  1J98 A;  1K83 K;  1G51 A;  2NVY C;  2R7Z A;  1INN A;  3LAJ A;  1KQ4 A;  1VJE A;  3HOU C;  4C3J K;  5M5W K;  3GTQ K;  2O5I A;  2VUM A;  4MEY A;  3GTM C;  3S14 K;  4A93 K;  3LYW A;  5M3F K;  4BBR C;  4BY1 K;  3TFI A;  3H0G A;  3RZD K;  2Y0S L;  4A3L C;  4Q4Z A;  2FQT A;  2V6U A;  4AYB L;  4Q5S A;  2CW0 A;  1O25 A;  3SZY A;  4FZB A;  3HOY K;  2A6E A;  4GTL A;  2PMZ L;  4G0U A;  4LK1 A;  5FLM C;  1VRQ C;  1DCP A;  4OIP A;  4C3I K;  4KMA A;  4G0W A;  5JVO A;  3VA7 A;  1PJ7 A;  3GTO A;  4QJV B;  3S15 K;  4A3L K;  1HQM A;  3S16 K;  4ZH4 A;  5EGH A;  4A3I K;  4KN7 A;  2L3U A;  4IOA S;  2E2I K;  2D6F C;  2PMZ D;  5IYB C;  3CQZ K;  4C2M K;  2A68 A;  3LPX A;  1WCM C;  4A3G C;  4A3K C;  4WF9 S;  1TWA K;  4XLN A;  4WFA S;  3FKI K;  1BDF A;  4BBR K;  2NVY K;  1TWA A;  5TMC A;  1XPP A;  3ADA C;  3AD9 C;  4A3K K;  2R7Z C;  2NVY A;  1I6H K;  1IL2 A;  3S1N K;  1O24 A;  4P9S A;  5IYB K;  4QIW L;  3N3Y A;  1Y1V C;  4KAR A;  1USM A;  1XXB A;  4YFN A;  2JA7 C;  1TWG K;  1ZVU A;  2Y3P A;  3S1Q K;  2A6H A;  2NVQ C;  1IBA A;  4BXX C;  3M3Y K;  2PPB A;  3I4N C;  2EBB A;  4PAA A;  4MEX A;  3GTK C;  4AH6 A;  1WSR A;  4KN4 A;  3GTP A;  3AH5 A;  4YFX A;  2PHC B;  3N0B A;  3HOY C;  5DM7 S;  1TWA C;  5IP7 K;  1WOP A;  3EQL A;  4GTB A;  1SFO K;  2PA8 D;  4KAS A;  1WCM A;  2KXY A;  2WAQ D;  1I3Q C;  1IQ0 A;  4LOW A;  4X6A K;  4BY1 C;  4OIQ A;  5CJ9 A;  1VLO A;  4A3C K;  4WCE S;  3S14 C;  4A93 C;  5IYC C;  3WOD A;  1I6V A;  2JA5 A;  2BE5 A;  3S1N C;  4Y52 C;  4Y7N C;  4A3F K;  4LJZ A;  3Q3Q A;  4KB4 A;  4BBS K;  1ZBS A;  3FOE A;  1JVI A;  3GTL A;  2KPU A;  1F7U A;  4XLP A;  4KM9 A;  4GFQ A;  4KM8 A;  3S0X A;  2GAG C;  4JK1 A;  2R92 K;  2ZFZ A;  5IYD K;  3HOW C;  5M5Y K;  2RH6 A;  4GT9 A;  4C3H K;  1EH1 A;  5E68 A;  3HOV K;  4A3E C;  2KWA A;  1XXA A;  2ZUF A;  3GSI A;  4A3B K;  2YU9 C;  5JVH S;  3GTG A;  4U67 S;  1SFO A;  2ZJQ S;  1R9T K;  4BBS C;  4GTE A;  1O2B A;  4G7O A;  3GTK K;  1Y1W K;  4C2M C;  4OIO A;  2L5N A;  1TWC A;  4OIN A;  2V6T A;  2R92 A;  5HL8 A;  3PO3 K;  4LQY A;  2JA5 K;  4KMU A;  3IPJ A;  1DCH A;  4XSX A;  3G4A A;  1XZP B;  1Y1V K;  1O28 A;  1TWF A;  1RU0 A;  4XCH A;  4P5A A;  1Y1W C;  4KB2 A;  2CFA B; 
#chains in the Genus database with same CATH homology
 1ZYR A;  3S1M K;  4C3I C;  4A3B C;  5TMC A;  3GTL C;  1XPP A;  2R7Z K;  5C4J C;  3GTP K;  4A3K K;  2PA8 L;  1WCM K;  4A3J K;  2E2H K;  3S1R C;  2JA8 C;  2R7Z C;  4A3E K;  3GTL K;  2B63 K;  1I6H K;  1R9T C;  3GTJ K;  4A3F C;  3S1N K;  2R93 C;  1Y1W C;  4X6A C;  2VUM C;  2NVQ K;  5IYB K;  4BY7 K;  4QIW L;  2WB1 D;  1Y1V C;  3HOZ K;  3GTM K;  2WAQ L;  3RZO K;  3GTG K;  4YFN A;  3I4M C;  3S16 C;  2E2J K;  2JA7 C;  4MQ9 A;  3M3Y C;  1TWG K;  3S1Q K;  3S2D K;  4LLG A;  2A6H A;  2NVQ C;  4BY7 C;  3HOU K;  2E2I C;  4BXX C;  1TWF K;  5M5X K;  4Y7N K;  3M3Y K;  4Y52 K;  3K7A C;  2NVX K;  2PPB A;  3I4N C;  1K83 C;  4MEX A;  3GTK C;  5C4X C;  5IP9 K;  3S17 K;  3RZO C;  4KN4 A;  3M4O C;  3S2H K;  3DXJ A;  4G7H A;  3S1M C;  4GZY A;  3K7A K;  4YFX A;  3HOY C;  4C3J C;  4AYB D;  1I3Q K;  4YG2 A;  5C3E C;  2B63 C;  3S2D C;  1I6H C;  3S1Q C;  5IYC K;  1TWA C;  4A3G K;  5FJ8 K;  5IP7 K;  3GTP C;  5C4J K;  4A3M K;  4A3C C;  4QJV A;  3HOX K;  2A69 A;  3EQL A;  5IP9 C;  1K83 K;  2NVY C;  1SFO K;  1YNN A;  3HOW K;  2PA8 D;  3GTQ C;  2JA6 C;  3RZD C;  3HOU C;  2WAQ D;  5C3E K;  1I3Q C;  4OIR A;  1TWC K;  4C3J K;  4X6A K;  2JA6 K;  5C44 C;  4BY1 C;  4OIQ A;  2O5I A;  4MEY A;  5M5W K;  3GTQ K;  2E2J C;  4A3D C;  1SMY A;  3I4M K;  4QIW D;  4A3C K;  2NVT C;  3GTM C;  3S14 C;  3S2H C;  4A93 C;  3M4O K;  3PO3 C;  5IYC C;  3WOD A;  2NVT K;  3S14 K;  1I6V A;  3S15 C;  4A93 K;  5M3F K;  2BE5 A;  4BBR C;  5C44 K;  3S1N C;  5M3M K;  4Y52 C;  4Y7N C;  4A3F K;  4BY1 K;  4LJZ A;  4BXX K;  3H3V D;  3RZD K;  3S1R K;  2JA8 K;  4A3J C;  2E2H C;  4BBS K;  2Y0S L;  4A3L C;  3HOV C;  3HOX C;  4AYB L;  4Q5S A;  2CW0 A;  4A3D K;  5TMF A;  4XLP A;  3PO2 C;  3HOY K;  4JK1 A;  4XSZ A;  2R92 K;  5IYD K;  1SFO C;  3HOW C;  4C3H K;  2A6E A;  5M5Y K;  5FLM K;  3GTG C;  4LK0 A;  1YNJ A;  2PMZ L;  3HOV K;  4A3E C;  4A3M C;  5IP7 C;  4LK1 A;  4C3H C;  5D4D A;  5FLM C;  3HOZ C;  1TWH C;  3CQZ C;  3H3V L;  4OIP A;  4C3I K;  3PO2 K;  2YU9 C;  4A3B K;  3I4N K;  2NVX C;  3GTO K;  4G7Z A;  3H0G K;  3GTJ C;  1R9T K;  4QJV B;  2YU9 K;  4A3I C;  3S15 K;  1I50 K;  4A3L K;  3HKZ D;  4BBS C;  1HQM A;  4NOI A;  3S16 K;  4ZH4 A;  1I50 C;  4A3I K;  4G7O A;  4KN7 A;  3S17 C;  5C4X K;  2WB1 L;  3GTK K;  1Y1W K;  3GTO C;  4C2M C;  4OIO A;  1TWF C;  2O5J A;  2E2I K;  2PMZ D;  4OIN A;  5IYB C;  1IW7 A;  2VUM K;  3CQZ K;  4C2M K;  1TWH K;  2A68 A;  1TWG C;  2JA7 K;  3PO3 K;  2JA5 K;  4KMU A;  4XSX A;  2JA5 C;  1WCM C;  4A3G C;  4A3K C;  5IYD C;  1TWA K;  2R92 C;  2Y0S D;  1Y1V K;  4XLN A;  1TWC C;  3FKI K;  3H0G C;  4YFK A;  3HKZ L;  2R93 K;  1BDF A;  4BBR K;  2NVY K;  4Q4Z A;  3FKI C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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