4A3MC

Rna polymerase ii initial transcribing complex with a 4nt dna-rna hybrid and soaked with ampcpp
Total Genus 60
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
60
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription
molecule keywords DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
publication title Structural basis of initial RNA polymerase II transcription.
pubmed doi rcsb
total genus 60
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2011-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 4a3mC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 4a3mC01
3GTQC 2NVYK 4Q5SA 3HOXK 2JA5K 3S16C 4KMUA 4A3IK 4YFNA 4C2MC 2PA8L 4QIWL 5IYBK 3H3VL 4A3BK 4QJVA 2PA8D 4QIWD 3H3VD 3HOYC 1Y1VK 5C3EK 3RZOK 2PPBA 3PO3C 4A3JC 2R7ZK 3S17K 1I6HK 1YNJA 3S1NC 2JA8C 3S1QC 4BY7K 3CQZK 4LK0A 4X6AC 5IYCK 2O5JA 4KN7A 5FLMK 1TWGK 4C3HC 3HOZK 1IW7A 3HOWK 5C4XK 3I4NC 4BBRC 3EQLA 2YU9C 3GTKC 5TMFA 4Y7NC 1HQMA 2JA7C 5M5WK 5C4JK 3PO2C 3I4MK 4A3GK 1K83K 1TWCC 3GTLK 3S14C 4JK1A 3M4OK 4G7ZA 3GTOK 2WB1D 1TWAK 3S1RK 4A3KK 2E2IK 2VUMK 4NOIA 2E2HK 4BBSC 3GTJC 2E2JK 1I50C 3FKIK 4BXXC 2R92C 4A3DC 1XPPA 4A3LK 1I6VA 4Y52C 1TWHK 1ZYRA 3H0GK 2NVXK 2NVQK 4G7HA 2JA6K 3GTGK 5C44C 3S2HC 4A3CC 5M3FK 2R93C 2CW0A 1Y1WC 1TWFC 5M5YK 3K7AK 3HOXC 4GZYA 4A3MC 4BBRK 4A3EK 5IP9C 3GTQK 5IYBC 2NVTC 4XSXA 3S16K 1I3QC 3HOUC 3RZDC 3M3YC 1SFOK 3GTMK 4QJVB 3S2DC 3HOYK 1I6HC 4AYBL 3GTPK 4AYBD 4A3FC 5TMCA 3CQZC 4MEYA 4OIOA 4G7OA 1R9TC 2B63K 3S1NK 2JA8K 4LLGA 1TWGC 4MEXA 3S1QK 3HOVC 5IP7K 3HKZL 3HOZC 2PMZL 3HKZD 4MQ9A 3HOWC 1WCMC 5C4XC 4C3HK 4BY1K 4OIPA 5IYDC 4XLNA 3I4NK 4A3GC 1K83C 5M5XK 4YFKA 4A93K 3M4OC 3S1MC 4C3JC 4LK1A 1TWAC 2NVYC 2O5IA 1TWCK 3S15K 3S14K 2JA5C 4KN4A 2E2HC 1SMYA 4XLPA 4A3IC 4C3IK 3FKIC 4ZH4A 4A3BC 3H0GC 1Y1VC 5C3EC 2JA6C 3RZOC 4BBSK 4Q4ZA 1I50K 4C2MK 4OINA 2R92K 4BXXK 4A3DK 4Y52K 5D4DA 4OIRA 2R7ZC 3S17C 3K7AC 3PO3K 2BE5A 3S2HK 4BY7C 2R93K 4A3JK 2A69A 1TWFK 1Y1WK 5IYCC 4A3CK 5FLMC 4A3MK 5IP9K 1SFOC 3GTMC 2NVTK 4X6AK 2WAQL 3DXJA 2WAQD 2PMZD 4OIQA 3GTPC 1I3QK 3RZDK 3HOUK 3M3YK 3S2DK 5C4JC 2A6EA 5M3MK 1BDFA 2B63C 3I4MC 2Y0SL 2YU9K 3GTKK 3GTLC 4A3FK 2Y0SD 5IP7C 4LJZA 4Y7NK 2JA7K 3PO2K 1R9TK 3GTOC 3S1RC 4A3KC 2E2IC 2VUMC 3HOVK 4BY1C 4XSZA 1YNNA 4YFXA 2E2JC 4A93C 4A3LC 3WODA 1WCMK 1TWHC 2NVXC 2NVQC 4YG2A 3GTGC 3GTJK 5IYDK 5FJ8K 3S15C 2A68A 5C44K 2WB1L 2A6HA 3S1MK 4C3JK 4C3IC 4A3EC
chains in the Genus database with same CATH superfamily
4FM9A 3HOXK 4C2MC 3A8KA 3BP3A 4QIWL 1DCPA 4KB2A 4QJVA 5IYBK 4QIWD 1FEUA 3HOYC 4A3BK 2PPBA 4WJ4A 2VUMA 4A3JC 5IOSA 3IPJA 1Y1VA 2PHCB 2O5JA 5FLMK 2JA6A 3FOFA 1TWGK 1IW7A 3AD8C 5C4XK 3EQLA 5C4JK 3Q3QA 3GTLK 4JK1A 4WJ3M 3GTOK 2P8TA 2VUMK 4KASA 4KM9A 3GTJC 2E2JK 4A3LK 4A93K 2B63A 1XPPA 2ZJRS 4WFBS 2JA6K 3GTGK 3S2HC 2R93C 1EH1A 1TWFC 4A3MC 4P5AA 5IP9C 4WFAS 4XSXA 3S16K 4PAAA 2JH3A 3M3YC 3RZDC 1TWCA 5CHPA 4AYBL 4AYBD 3CQZC 4OIOA 2B63K 1RU0A 3S1NK 4LLGA 3HOVC 3QX3A 3HKZL 5EGEA 3V4GA 3HKZD 3HOWC 4KAWX 4P9SA 1IL2A 4C3HK 4OIPA 3I4NK 4IO9S 1K83C 5M5XK 4YFKA 4LK1A 1TWAC 1TWCK 3S14K 1SMYA 4C3IK 4KATA 4A3BC 1WQFA 4O2DA 1INNA 2KWAA 3GIRA 4C2MK 4OINA 1R9TA 5D4DA 4KM8A 3K7AC 2KPUA 3MMLB 2ZJQS 4A3JK 2A69A 1UV7A 4KMDA 5FLMC 3GTJA 4KARA 4GTLA 1JQWA 1USOA 1ZBSA 3HOUK 3TFJA 1AB4A 1TWFA 2NVYA 5C4JC 1VJEA 3GTLC 5HQHA 2RGRA 4KDDA 1R9TK 3GTOC 2VUMC 4M1XA 2KXYA 3OREA 2E2JC 4A93C 4A3LC 1ZXOA 3CAGA 5L46A 5HL7S 3CQZA 4YG2A 3GTGC 1F9NA 3GTJK 5FJ8K 3GSIA 3S15C 2A68A 4KB4A 1O27A 2NVYK 4KC6A 3S16C 4KMUA 4GTCA 1KQ4A 1K83A 5C3EK 3FOEA 1TWAA 3T01A 3FHZA 2E2IA 1IS1A 5JVGS 2GAGC 1YNJA 3S1NC 3CQZK 5IYCK 4XCHA 4GTFA 1V5VA 4G0UA 4C3HC 3LYWA 2V6SA 3HOWK 3DLLS 3I4NC 1WIHA 3T02A 1WQGA 4FZBA 2W7VA 4Y7NC 2JA7C 5TJ3A 5M5WK 3PO2C 3G4AA 1K83K 1TWCC 4WCES 3S14C 1XXCA 1TWAK 2E2IK 1JVIA 3GTLA 3TFIA 1WOSA 2CFAB 2L5NA 5C44C 3GTOA 4A3CC 5M3FK 5M5YK 3K7AK 3GTGA 1J6WA 3HOUC 4QJVB 1O2FB 3TFHA 1VGXA 3G4CA 1R9TC 4BLBA 4LQYA 2JA8K 2R92A 3HOZC 2PMZL 4GTEA 1ISEA 1IQ0A 4BLAA 1PJ7A 4LOWA 4WILA 3CF5S 4A3GC 3S0XA 5DM6S 4DDQA 3M4OC 4GT9A 1I3QA 2NVYC 3L4JA 3S15K 1WSRA 3AD9C 3LPXA 3FKIC 4ZH4A 3H0GC 5C3EC 4BBSK 2JA7A 1BS2A 2R92K 4BXXK 4A3DK 4Y52K 4OIRA 1PJ5A 1BJTA 1X31C 5IYCC 1IE0A 3GTMC 2WAQL 1XZQB 3DXJA 2WAQD 1I3QK 1F7UA 3S2DK 5DM7S 2JA5A 1BDFA 5IP7C 4Y7NK 2JA7K 1O26A 3PO2K 1XZPA 2E2IC 1YNNA 1USMA 5C44K 2WB1L 2A6HA 4A3CK 3S1MK 1YCLA 1VH2A 2JA5K 4A3IK 4GFQA 4BKWA 3H3VL 3A8IA 4AH6A 3H3VD 2ZJPS 2FQOA 1J6XA 1XXAA 3S17K 1PJ6A 3FKIA 2JA8C 2D6FC 2ZUEA 2NVXA 4LK0A 3H0GA 3JSTA 3HOZK 3SZYA 3L4KA 2YU9C 4PABA 3GTQA 3GTKC 1HQMA 2ZUFA 3I4MK 4A3GK 3GTMA 3GEEA 3A8JA 3M4OK 4G7ZA 3S1RK 4A3KK 4NOIA 4WF9S 4BBSC 3FKIK 4BXXC 2R92C 4A3DC 2GSNA 4Y52C 3H0GK 1F93A 3HXAA 2GSOA 4P5BA 4G7HA 2NVXK 2CW0A 4GZYA 2L3UA 3OEPA 4BBRK 3GTQK 1J6VA 5IOTA 5EGHA 1I3QC 3GTMK 3S2DC 1I6HC 1EK8A 5IOQA 2XCRB 4G7OA 3ERED 3S1QK 5IP7K 1O2AA 1HI9A 1Y1WA 4XLNA 1BGWA 2P5MA 3S1MC 2O5IA 3AD7C 3N0CA 2JA5C 2E2HC 4A3IC 2YU9A 3GTKA 2CFAA 1I50K 3GEHA 3S17C 2GSUA 1WCMA 1Y1WK 1B4AA 3NUHA 1WORA 1JOEA 1SFOC 2NVTK 3LAJA 3GEIA 1O24A 2PMZD 3GTPC 1G51A 2A6EA 1DCOA 4GTAA 3I4MC 2Y0SL 2YU9K 3GTKK 4A3FK 2Y0SD 1ZVUA 4LJZA 1XXBA 3PIPS 1WQHA 2RH6A 3S1RC 4G0WA 4A3KC 4BY1C 4C45A 4XSZA 2R7ZA 4YFXA 1WCMK 2NVXC 3OPFA 2ZFZA 5IYDK 3ADAC 1EQRA 2XCQA 4GTBA 4BBRC 3BUEA 4GTDA 3GTQC 4C3JK 4Q5SA 4YFNA 3GDZA 5E68A 2PA8L 2PA8D 1Y1VK 3RZOK 3PO3C 1EI6A 2R7ZK 1I6HK 5HL8A 2E2HA 2KQ1A 3S1QC 4LR2A 4BY7K 1TWHA 4X6AC 4KN7A 1XZQA 2XCOA 5TMFA 1DD5A 2Y3PA 1J98A 1SFOA 3T00A 2V6TA 2WB1D 3GTPA 1XZPB 2E2HK 1I50C 1O28A 1I6VA 1TWHK 2NVQK 1ZYRA 1O29A 3AQOA 1Y1WC 3HOXC 1WOPA 4A3EK 5IYBC 2NVTC 1GE9A 1SFOK 3HOYK 4ILDA 5IORA 3GTPK 4A3FC 5TMCA 3VA7A 4MEYA 2EBBA 3SZZA 1TWGC 4MEXA 1L0WA 5CJ9A 3N3YA 3AH5A 4KMAA 4MQ9A 4IOCS 1WCMC 5C4XC 2R93A 5JVHS 3N0BA 4BY1K 5IYDC 4G0VA 2V6UA 3PIOS 4C3JC 1EFWA 4KN4A 4XLPA 3AQPA 4RMFA 4WFNS 1Y1VC 2JA6C 3RZOC 4Q4ZA 1WSVA 1IBAA 4U67S 3BP8C 2R7ZC 2FQTA 3PO3K 2BE5A 3S2HK 4BY7C 2R93K 4J3NA 1TWFK 1I50A 1ZQ1C 4A3MK 1VRQC 1F7VA 5IP9K 4X6AK 4KMHA 4OIQA 3M3YK 3RZDK 1YX2A 5M3MK 2B63C 3TTGA 1O2BA 1O25A 5JVOA 1B4BA 3HOVK 1WOOA 3WODA 1TWHC 2NVQC 1C0AA 2GAHC 1TWGA 1DCHA 5JFEA 3LAPA 4IOAS 1VLOA 4C3IC 4A3EC
chains in the Genus database with same CATH topology
3GTQC 2NVYK 4Q5SA 3HOXK 2JA5K 3S16C 4KMUA 4A3IK 4YFNA 4C2MC 2PA8L 4QIWL 5IYBK 3H3VL 4A3BK 4QJVA 2PA8D 4QIWD 3H3VD 3HOYC 1Y1VK 5C3EK 3RZOK 2PPBA 3PO3C 4A3JC 2R7ZK 3S17K 1I6HK 1YNJA 3S1NC 2JA8C 3S1QC 4BY7K 3CQZK 4LK0A 4X6AC 5IYCK 2O5JA 4KN7A 5FLMK 1TWGK 4C3HC 3HOZK 1IW7A 3HOWK 5C4XK 3I4NC 4BBRC 3EQLA 2YU9C 3GTKC 5TMFA 4Y7NC 1HQMA 2JA7C 5M5WK 5C4JK 3PO2C 3I4MK 4A3GK 1K83K 1TWCC 3GTLK 3S14C 4JK1A 3M4OK 4G7ZA 3GTOK 2WB1D 1TWAK 3S1RK 4A3KK 2E2IK 2VUMK 4NOIA 2E2HK 4BBSC 3GTJC 2E2JK 1I50C 3FKIK 4BXXC 2R92C 4A3DC 1XPPA 4A3LK 1I6VA 4Y52C 1TWHK 1ZYRA 3H0GK 2NVXK 2NVQK 4G7HA 2JA6K 3GTGK 5C44C 3S2HC 4A3CC 5M3FK 2R93C 2CW0A 1Y1WC 1TWFC 5M5YK 3K7AK 3HOXC 4GZYA 4A3MC 4BBRK 4A3EK 5IP9C 3GTQK 5IYBC 2NVTC 4XSXA 3S16K 1I3QC 3HOUC 3RZDC 3M3YC 1SFOK 3GTMK 4QJVB 3S2DC 3HOYK 1I6HC 4AYBL 3GTPK 4AYBD 4A3FC 5TMCA 3CQZC 4MEYA 4OIOA 4G7OA 1R9TC 2B63K 3S1NK 2JA8K 4LLGA 1TWGC 4MEXA 3S1QK 3HOVC 5IP7K 3HKZL 3HOZC 2PMZL 3HKZD 4MQ9A 3HOWC 1WCMC 5C4XC 4C3HK 4BY1K 4OIPA 5IYDC 4XLNA 3I4NK 4A3GC 1K83C 5M5XK 4YFKA 4A93K 3M4OC 3S1MC 4C3JC 4LK1A 1TWAC 2NVYC 2O5IA 1TWCK 3S15K 3S14K 2JA5C 4KN4A 2E2HC 1SMYA 4XLPA 4A3IC 4C3IK 3FKIC 4ZH4A 4A3BC 3H0GC 1Y1VC 5C3EC 2JA6C 3RZOC 4BBSK 4Q4ZA 1I50K 4C2MK 4OINA 2R92K 4BXXK 4A3DK 4Y52K 5D4DA 4OIRA 2R7ZC 3S17C 3K7AC 3PO3K 2BE5A 3S2HK 4BY7C 2R93K 4A3JK 2A69A 1TWFK 1Y1WK 5IYCC 4A3CK 5FLMC 4A3MK 5IP9K 1SFOC 3GTMC 2NVTK 4X6AK 2WAQL 3DXJA 2WAQD 2PMZD 4OIQA 3GTPC 1I3QK 3RZDK 3HOUK 3M3YK 3S2DK 5C4JC 2A6EA 5M3MK 1BDFA 2B63C 3I4MC 2Y0SL 2YU9K 3GTKK 3GTLC 4A3FK 2Y0SD 5IP7C 4LJZA 4Y7NK 2JA7K 3PO2K 1R9TK 3GTOC 3S1RC 4A3KC 2E2IC 2VUMC 3HOVK 4BY1C 4XSZA 1YNNA 4YFXA 2E2JC 4A93C 4A3LC 3WODA 1WCMK 1TWHC 2NVXC 2NVQC 4YG2A 3GTGC 3GTJK 5IYDK 5FJ8K 3S15C 2A68A 5C44K 2WB1L 2A6HA 3S1MK 4C3JK 4C3IC 4A3EC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3GTQ C;  2NVY K;  4Q5S A;  3HOX K;  2JA5 K;  3S16 C;  4KMU A;  4A3I K;  4YFN A;  4C2M C;  2PA8 L;  4QIW L;  5IYB K;  3H3V L;  4A3B K;  4QJV A;  2PA8 D;  4QIW D;  3H3V D;  3HOY C;  1Y1V K;  5C3E K;  3RZO K;  2PPB A;  3PO3 C;  4A3J C;  2R7Z K;  3S17 K;  1I6H K;  1YNJ A;  3S1N C;  2JA8 C;  3S1Q C;  4BY7 K;  3CQZ K;  4LK0 A;  4X6A C;  5IYC K;  2O5J A;  4KN7 A;  5FLM K;  1TWG K;  4C3H C;  3HOZ K;  1IW7 A;  3HOW K;  5C4X K;  3I4N C;  4BBR C;  3EQL A;  2YU9 C;  3GTK C;  5TMF A;  4Y7N C;  1HQM A;  2JA7 C;  5M5W K;  5C4J K;  3PO2 C;  3I4M K;  4A3G K;  1K83 K;  1TWC C;  3GTL K;  3S14 C;  4JK1 A;  3M4O K;  4G7Z A;  3GTO K;  2WB1 D;  1TWA K;  3S1R K;  4A3K K;  2E2I K;  2VUM K;  4NOI A;  2E2H K;  4BBS C;  3GTJ C;  2E2J K;  1I50 C;  3FKI K;  4BXX C;  2R92 C;  4A3D C;  1XPP A;  4A3L K;  1I6V A;  4Y52 C;  1TWH K;  1ZYR A;  3H0G K;  2NVX K;  2NVQ K;  4G7H A;  2JA6 K;  3GTG K;  5C44 C;  3S2H C;  4A3C C;  5M3F K;  2R93 C;  2CW0 A;  1Y1W C;  1TWF C;  5M5Y K;  3K7A K;  3HOX C;  4GZY A;  4A3M C;  4BBR K;  4A3E K;  5IP9 C;  3GTQ K;  5IYB C;  2NVT C;  4XSX A;  3S16 K;  1I3Q C;  3HOU C;  3RZD C;  3M3Y C;  1SFO K;  3GTM K;  4QJV B;  3S2D C;  3HOY K;  1I6H C;  4AYB L;  3GTP K;  4AYB D;  4A3F C;  5TMC A;  3CQZ C;  4MEY A;  4OIO A;  4G7O A;  1R9T C;  2B63 K;  3S1N K;  2JA8 K;  4LLG A;  1TWG C;  4MEX A;  3S1Q K;  3HOV C;  5IP7 K;  3HKZ L;  3HOZ C;  2PMZ L;  3HKZ D;  4MQ9 A;  3HOW C;  1WCM C;  5C4X C;  4C3H K;  4BY1 K;  4OIP A;  5IYD C;  4XLN A;  3I4N K;  4A3G C;  1K83 C;  5M5X K;  4YFK A;  4A93 K;  3M4O C;  3S1M C;  4C3J C;  4LK1 A;  1TWA C;  2NVY C;  2O5I A;  1TWC K;  3S15 K;  3S14 K;  2JA5 C;  4KN4 A;  2E2H C;  1SMY A;  4XLP A;  4A3I C;  4C3I K;  3FKI C;  4ZH4 A;  4A3B C;  3H0G C;  1Y1V C;  5C3E C;  2JA6 C;  3RZO C;  4BBS K;  4Q4Z A;  1I50 K;  4C2M K;  4OIN A;  2R92 K;  4BXX K;  4A3D K;  4Y52 K;  5D4D A;  4OIR A;  2R7Z C;  3S17 C;  3K7A C;  3PO3 K;  2BE5 A;  3S2H K;  4BY7 C;  2R93 K;  4A3J K;  2A69 A;  1TWF K;  1Y1W K;  5IYC C;  4A3C K;  5FLM C;  4A3M K;  5IP9 K;  1SFO C;  3GTM C;  2NVT K;  4X6A K;  2WAQ L;  3DXJ A;  2WAQ D;  2PMZ D;  4OIQ A;  3GTP C;  1I3Q K;  3RZD K;  3HOU K;  3M3Y K;  3S2D K;  5C4J C;  2A6E A;  5M3M K;  1BDF A;  2B63 C;  3I4M C;  2Y0S L;  2YU9 K;  3GTK K;  3GTL C;  4A3F K;  2Y0S D;  5IP7 C;  4LJZ A;  4Y7N K;  2JA7 K;  3PO2 K;  1R9T K;  3GTO C;  3S1R C;  4A3K C;  2E2I C;  2VUM C;  3HOV K;  4BY1 C;  4XSZ A;  1YNN A;  4YFX A;  2E2J C;  4A93 C;  4A3L C;  3WOD A;  1WCM K;  1TWH C;  2NVX C;  2NVQ C;  4YG2 A;  3GTG C;  3GTJ K;  5IYD K;  5FJ8 K;  3S15 C;  2A68 A;  5C44 K;  2WB1 L;  2A6H A;  3S1M K;  4C3J K;  4C3I C;  4A3E C; 
#chains in the Genus database with same CATH topology
 4FM9 A;  3HOX K;  4C2M C;  3A8K A;  3BP3 A;  4QIW L;  1DCP A;  4KB2 A;  4QJV A;  5IYB K;  4QIW D;  1FEU A;  3HOY C;  4A3B K;  2PPB A;  4WJ4 A;  2VUM A;  4A3J C;  5IOS A;  3IPJ A;  1Y1V A;  2PHC B;  2O5J A;  5FLM K;  2JA6 A;  3FOF A;  1TWG K;  1IW7 A;  3AD8 C;  5C4X K;  3EQL A;  5C4J K;  3Q3Q A;  3GTL K;  4JK1 A;  4WJ3 M;  3GTO K;  2P8T A;  2VUM K;  4KAS A;  4KM9 A;  3GTJ C;  2E2J K;  4A3L K;  4A93 K;  2B63 A;  1XPP A;  2ZJR S;  4WFB S;  2JA6 K;  3GTG K;  3S2H C;  2R93 C;  1EH1 A;  1TWF C;  4A3M C;  4P5A A;  5IP9 C;  4WFA S;  4XSX A;  3S16 K;  4PAA A;  2JH3 A;  3M3Y C;  3RZD C;  1TWC A;  5CHP A;  4AYB L;  4AYB D;  3CQZ C;  4OIO A;  2B63 K;  1RU0 A;  3S1N K;  4LLG A;  3HOV C;  3QX3 A;  3HKZ L;  5EGE A;  3V4G A;  3HKZ D;  3HOW C;  4KAW X;  4P9S A;  1IL2 A;  4C3H K;  4OIP A;  3I4N K;  4IO9 S;  1K83 C;  5M5X K;  4YFK A;  4LK1 A;  1TWA C;  1TWC K;  3S14 K;  1SMY A;  4C3I K;  4KAT A;  4A3B C;  1WQF A;  4O2D A;  1INN A;  2KWA A;  3GIR A;  4C2M K;  4OIN A;  1R9T A;  5D4D A;  4KM8 A;  3K7A C;  2KPU A;  3MML B;  2ZJQ S;  4A3J K;  2A69 A;  1UV7 A;  4KMD A;  5FLM C;  3GTJ A;  4KAR A;  4GTL A;  1JQW A;  1USO A;  1ZBS A;  3HOU K;  3TFJ A;  1AB4 A;  1TWF A;  2NVY A;  5C4J C;  1VJE A;  3GTL C;  5HQH A;  2RGR A;  4KDD A;  1R9T K;  3GTO C;  2VUM C;  4M1X A;  2KXY A;  3ORE A;  2E2J C;  4A93 C;  4A3L C;  1ZXO A;  3CAG A;  5L46 A;  5HL7 S;  3CQZ A;  4YG2 A;  3GTG C;  1F9N A;  3GTJ K;  5FJ8 K;  3GSI A;  3S15 C;  2A68 A;  4KB4 A;  1O27 A;  2NVY K;  4KC6 A;  3S16 C;  4KMU A;  4GTC A;  1KQ4 A;  1K83 A;  5C3E K;  3FOE A;  1TWA A;  3T01 A;  3FHZ A;  2E2I A;  1IS1 A;  5JVG S;  2GAG C;  1YNJ A;  3S1N C;  3CQZ K;  5IYC K;  4XCH A;  4GTF A;  1V5V A;  4G0U A;  4C3H C;  3LYW A;  2V6S A;  3HOW K;  3DLL S;  3I4N C;  1WIH A;  3T02 A;  1WQG A;  4FZB A;  2W7V A;  4Y7N C;  2JA7 C;  5TJ3 A;  5M5W K;  3PO2 C;  3G4A A;  1K83 K;  1TWC C;  4WCE S;  3S14 C;  1XXC A;  1TWA K;  2E2I K;  1JVI A;  3GTL A;  3TFI A;  1WOS A;  2CFA B;  2L5N A;  5C44 C;  3GTO A;  4A3C C;  5M3F K;  5M5Y K;  3K7A K;  3GTG A;  1J6W A;  3HOU C;  4QJV B;  1O2F B;  3TFH A;  1VGX A;  3G4C A;  1R9T C;  4BLB A;  4LQY A;  2JA8 K;  2R92 A;  3HOZ C;  2PMZ L;  4GTE A;  1ISE A;  1IQ0 A;  4BLA A;  1PJ7 A;  4LOW A;  4WIL A;  3CF5 S;  4A3G C;  3S0X A;  5DM6 S;  4DDQ A;  3M4O C;  4GT9 A;  1I3Q A;  2NVY C;  3L4J A;  3S15 K;  1WSR A;  3AD9 C;  3LPX A;  3FKI C;  4ZH4 A;  3H0G C;  5C3E C;  4BBS K;  2JA7 A;  1BS2 A;  2R92 K;  4BXX K;  4A3D K;  4Y52 K;  4OIR A;  1PJ5 A;  1BJT A;  1X31 C;  5IYC C;  1IE0 A;  3GTM C;  2WAQ L;  1XZQ B;  3DXJ A;  2WAQ D;  1I3Q K;  1F7U A;  3S2D K;  5DM7 S;  2JA5 A;  1BDF A;  5IP7 C;  4Y7N K;  2JA7 K;  1O26 A;  3PO2 K;  1XZP A;  2E2I C;  1YNN A;  1USM A;  5C44 K;  2WB1 L;  2A6H A;  4A3C K;  3S1M K;  1YCL A;  1VH2 A;  2JA5 K;  4A3I K;  4GFQ A;  4BKW A;  3H3V L;  3A8I A;  4AH6 A;  3H3V D;  2ZJP S;  2FQO A;  1J6X A;  1XXA A;  3S17 K;  1PJ6 A;  3FKI A;  2JA8 C;  2D6F C;  2ZUE A;  2NVX A;  4LK0 A;  3H0G A;  3JST A;  3HOZ K;  3SZY A;  3L4K A;  2YU9 C;  4PAB A;  3GTQ A;  3GTK C;  1HQM A;  2ZUF A;  3I4M K;  4A3G K;  3GTM A;  3GEE A;  3A8J A;  3M4O K;  4G7Z A;  3S1R K;  4A3K K;  4NOI A;  4WF9 S;  4BBS C;  3FKI K;  4BXX C;  2R92 C;  4A3D C;  2GSN A;  4Y52 C;  3H0G K;  1F93 A;  3HXA A;  2GSO A;  4P5B A;  4G7H A;  2NVX K;  2CW0 A;  4GZY A;  2L3U A;  3OEP A;  4BBR K;  3GTQ K;  1J6V A;  5IOT A;  5EGH A;  1I3Q C;  3GTM K;  3S2D C;  1I6H C;  1EK8 A;  5IOQ A;  2XCR B;  4G7O A;  3ERE D;  3S1Q K;  5IP7 K;  1O2A A;  1HI9 A;  1Y1W A;  4XLN A;  1BGW A;  2P5M A;  3S1M C;  2O5I A;  3AD7 C;  3N0C A;  2JA5 C;  2E2H C;  4A3I C;  2YU9 A;  3GTK A;  2CFA A;  1I50 K;  3GEH A;  3S17 C;  2GSU A;  1WCM A;  1Y1W K;  1B4A A;  3NUH A;  1WOR A;  1JOE A;  1SFO C;  2NVT K;  3LAJ A;  3GEI A;  1O24 A;  2PMZ D;  3GTP C;  1G51 A;  2A6E A;  1DCO A;  4GTA A;  3I4M C;  2Y0S L;  2YU9 K;  3GTK K;  4A3F K;  2Y0S D;  1ZVU A;  4LJZ A;  1XXB A;  3PIP S;  1WQH A;  2RH6 A;  3S1R C;  4G0W A;  4A3K C;  4BY1 C;  4C45 A;  4XSZ A;  2R7Z A;  4YFX A;  1WCM K;  2NVX C;  3OPF A;  2ZFZ A;  5IYD K;  3ADA C;  1EQR A;  2XCQ A;  4GTB A;  4BBR C;  3BUE A;  4GTD A;  3GTQ C;  4C3J K;  4Q5S A;  4YFN A;  3GDZ A;  5E68 A;  2PA8 L;  2PA8 D;  1Y1V K;  3RZO K;  3PO3 C;  1EI6 A;  2R7Z K;  1I6H K;  5HL8 A;  2E2H A;  2KQ1 A;  3S1Q C;  4LR2 A;  4BY7 K;  1TWH A;  4X6A C;  4KN7 A;  1XZQ A;  2XCO A;  5TMF A;  1DD5 A;  2Y3P A;  1J98 A;  1SFO A;  3T00 A;  2V6T A;  2WB1 D;  3GTP A;  1XZP B;  2E2H K;  1I50 C;  1O28 A;  1I6V A;  1TWH K;  2NVQ K;  1ZYR A;  1O29 A;  3AQO A;  1Y1W C;  3HOX C;  1WOP A;  4A3E K;  5IYB C;  2NVT C;  1GE9 A;  1SFO K;  3HOY K;  4ILD A;  5IOR A;  3GTP K;  4A3F C;  5TMC A;  3VA7 A;  4MEY A;  2EBB A;  3SZZ A;  1TWG C;  4MEX A;  1L0W A;  5CJ9 A;  3N3Y A;  3AH5 A;  4KMA A;  4MQ9 A;  4IOC S;  1WCM C;  5C4X C;  2R93 A;  5JVH S;  3N0B A;  4BY1 K;  5IYD C;  4G0V A;  2V6U A;  3PIO S;  4C3J C;  1EFW A;  4KN4 A;  4XLP A;  3AQP A;  4RMF A;  4WFN S;  1Y1V C;  2JA6 C;  3RZO C;  4Q4Z A;  1WSV A;  1IBA A;  4U67 S;  3BP8 C;  2R7Z C;  2FQT A;  3PO3 K;  2BE5 A;  3S2H K;  4BY7 C;  2R93 K;  4J3N A;  1TWF K;  1I50 A;  1ZQ1 C;  4A3M K;  1VRQ C;  1F7V A;  5IP9 K;  4X6A K;  4KMH A;  4OIQ A;  3M3Y K;  3RZD K;  1YX2 A;  5M3M K;  2B63 C;  3TTG A;  1O2B A;  1O25 A;  5JVO A;  1B4B A;  3HOV K;  1WOO A;  3WOD A;  1TWH C;  2NVQ C;  1C0A A;  2GAH C;  1TWG A;  1DCH A;  5JFE A;  3LAP A;  4IOA S;  1VLO A;  4C3I C;  4A3E C; 
#chains in the Genus database with same CATH homology
 3GTQ C;  2NVY K;  4Q5S A;  3HOX K;  2JA5 K;  3S16 C;  4KMU A;  4A3I K;  4YFN A;  4C2M C;  2PA8 L;  4QIW L;  5IYB K;  3H3V L;  4A3B K;  4QJV A;  2PA8 D;  4QIW D;  3H3V D;  3HOY C;  1Y1V K;  5C3E K;  3RZO K;  2PPB A;  3PO3 C;  4A3J C;  2R7Z K;  3S17 K;  1I6H K;  1YNJ A;  3S1N C;  2JA8 C;  3S1Q C;  4BY7 K;  3CQZ K;  4LK0 A;  4X6A C;  5IYC K;  2O5J A;  4KN7 A;  5FLM K;  1TWG K;  4C3H C;  3HOZ K;  1IW7 A;  3HOW K;  5C4X K;  3I4N C;  4BBR C;  3EQL A;  2YU9 C;  3GTK C;  5TMF A;  4Y7N C;  1HQM A;  2JA7 C;  5M5W K;  5C4J K;  3PO2 C;  3I4M K;  4A3G K;  1K83 K;  1TWC C;  3GTL K;  3S14 C;  4JK1 A;  3M4O K;  4G7Z A;  3GTO K;  2WB1 D;  1TWA K;  3S1R K;  4A3K K;  2E2I K;  2VUM K;  4NOI A;  2E2H K;  4BBS C;  3GTJ C;  2E2J K;  1I50 C;  3FKI K;  4BXX C;  2R92 C;  4A3D C;  1XPP A;  4A3L K;  1I6V A;  4Y52 C;  1TWH K;  1ZYR A;  3H0G K;  2NVX K;  2NVQ K;  4G7H A;  2JA6 K;  3GTG K;  5C44 C;  3S2H C;  4A3C C;  5M3F K;  2R93 C;  2CW0 A;  1Y1W C;  1TWF C;  5M5Y K;  3K7A K;  3HOX C;  4GZY A;  4A3M C;  4BBR K;  4A3E K;  5IP9 C;  3GTQ K;  5IYB C;  2NVT C;  4XSX A;  3S16 K;  1I3Q C;  3HOU C;  3RZD C;  3M3Y C;  1SFO K;  3GTM K;  4QJV B;  3S2D C;  3HOY K;  1I6H C;  4AYB L;  3GTP K;  4AYB D;  4A3F C;  5TMC A;  3CQZ C;  4MEY A;  4OIO A;  4G7O A;  1R9T C;  2B63 K;  3S1N K;  2JA8 K;  4LLG A;  1TWG C;  4MEX A;  3S1Q K;  3HOV C;  5IP7 K;  3HKZ L;  3HOZ C;  2PMZ L;  3HKZ D;  4MQ9 A;  3HOW C;  1WCM C;  5C4X C;  4C3H K;  4BY1 K;  4OIP A;  5IYD C;  4XLN A;  3I4N K;  4A3G C;  1K83 C;  5M5X K;  4YFK A;  4A93 K;  3M4O C;  3S1M C;  4C3J C;  4LK1 A;  1TWA C;  2NVY C;  2O5I A;  1TWC K;  3S15 K;  3S14 K;  2JA5 C;  4KN4 A;  2E2H C;  1SMY A;  4XLP A;  4A3I C;  4C3I K;  3FKI C;  4ZH4 A;  4A3B C;  3H0G C;  1Y1V C;  5C3E C;  2JA6 C;  3RZO C;  4BBS K;  4Q4Z A;  1I50 K;  4C2M K;  4OIN A;  2R92 K;  4BXX K;  4A3D K;  4Y52 K;  5D4D A;  4OIR A;  2R7Z C;  3S17 C;  3K7A C;  3PO3 K;  2BE5 A;  3S2H K;  4BY7 C;  2R93 K;  4A3J K;  2A69 A;  1TWF K;  1Y1W K;  5IYC C;  4A3C K;  5FLM C;  4A3M K;  5IP9 K;  1SFO C;  3GTM C;  2NVT K;  4X6A K;  2WAQ L;  3DXJ A;  2WAQ D;  2PMZ D;  4OIQ A;  3GTP C;  1I3Q K;  3RZD K;  3HOU K;  3M3Y K;  3S2D K;  5C4J C;  2A6E A;  5M3M K;  1BDF A;  2B63 C;  3I4M C;  2Y0S L;  2YU9 K;  3GTK K;  3GTL C;  4A3F K;  2Y0S D;  5IP7 C;  4LJZ A;  4Y7N K;  2JA7 K;  3PO2 K;  1R9T K;  3GTO C;  3S1R C;  4A3K C;  2E2I C;  2VUM C;  3HOV K;  4BY1 C;  4XSZ A;  1YNN A;  4YFX A;  2E2J C;  4A93 C;  4A3L C;  3WOD A;  1WCM K;  1TWH C;  2NVX C;  2NVQ C;  4YG2 A;  3GTG C;  3GTJ K;  5IYD K;  5FJ8 K;  3S15 C;  2A68 A;  5C44 K;  2WB1 L;  2A6H A;  3S1M K;  4C3J K;  4C3I C;  4A3E C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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