4AGTA

Crystal structure of fucose binding lectin from aspergillus fumigatus (afl) in complex with fuc1-6glcnac.
Total Genus 83
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
83
sequence length
314
structure length
314
Chain Sequence
STPGAQQVLFRTGIAAVNSTNHLRVYFQDVYGSIRESLYEGSWANGTEKNVIGNAKLGSPVAATSKELKHIRVYTLTEGNTLQEFAYDSGTGWYNGGLGGAKFQVAPYSCIAAVFLAGTDALQLRIYAQKPDNTIQEYMWNGDGWKEGTNLGGALPGTGIGATSFRYTDYNGPSIRIWFQTDDLKLVQRAYDPHKGWYPDLVTIFDRAPPRTAIAATSFGAGNSSIYMRIYFVNSDNTIWQVCWDHGKGYHDKGTITPVIQGSEVAIISWGSFANNGPDLRLYFQNGTYISAVSEWVWNRAHGSQLGRSALPPA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Sugar binding protein
molecule keywords FUCOSE-SPECIFIC LECTIN FLEA
publication title Structural Insights Into Aspergillus Fumigatus Lectin Specificity: Afl Binding Sites are Functionally Non-Equivalent
pubmed doi rcsb
source organism Aspergillus fumigatus
total genus 83
structure length 314
sequence length 314
chains with identical sequence B
ec nomenclature
pdb deposition date 2012-01-31

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF07938 Fungal_lectin Fungal fucose-specific lectin
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.120.10.70 Mainly Beta 6 Propeller Neuraminidase Fucose-specific lectin 4agtA00
4D52C 5EO7A 1IUBA 4C1YA 4D4UA 4AHAA 4D52B 4C1YB 5EO8A 4CSDA 4UOUA 5H47A 4AH4A 1IUCA 4AGIA 4D52A 4AGTA 1OFZA
chains in the Genus database with same CATH superfamily
4CPZA 3V64C 1MS5A 1N6FA 4KS5A 2FLUX 1CVMA 1W21A 3ALXA 4H52A 1C5KA 4XJUA 2YDTA 4YY8A 3II7A 4K3YA 4G3NA 1W20A 5FNRA 1IVCA 1H6LA 1NMAN 1L7HA 3K37A 1B9VA 4GEZA 1SLIA 5M1ZA 4YW1A 1N1SA 4XJ8A 3HLHA 1IVEA 1NNCA 4HW6A 4AGIA 2X9MA 4SLIA 3TIAA 1MS1A 2HU0A 4KS3A 3K36A 4HIZA 4GZQA 5F9TA 4XJ9A 4HHQA 4YZ2A 2BZDA 4GZOA 2IAPA 2AH2A 5EO8A 4Q1UA 3PJQA 4D52B 3TI5A 4QNPA 4GN9A 4WEGA 5GX1A 2WOZA 4X6KA 4HHOA 4XIKA 4YW5A 2IAUA 3S8VA 6NN9A 2HQSA 4CPYA 5GX3A 3NSSA 1W8NA 2HTUA 1L7FA 4MJUA 1QLGA 4FOQA 1N6DA 3VNHA 5HUMA 4GZSA 2P4OA 4D52C 3NO0A 2HTRA 1NNBA 1WCQA 3TI4A 1A4GA 4IFJA 2IAVA 4GZWA 1B9TA 1A14N 3V1SA 2HU4A 2IAQA 3Q6KA 2DSOA 4M4UA 2VAQA 1A4QA 4L7BA 5B2CA 4XILA 4XJAA 2YDPA 2QWFA 1SLLA 1Z4VA 4HZXA 5EX7A 1MZ6A 1VCJA 3FW0A 4KS4A 4HZWA 3OPZA 3K3AA 4FPLA 4K1JA 1Z4XA 3INBA 4D4UA 4GDIA 3D12A 5FNSA 4FJ6A 2SLIA 1CQ1A 3K39A 2QWJA 4XYXA 1MS8A 1U6DX 2BATA 1WCSA 3D11A 1SNTA 4HZYA 3E5ZA 2VK6A 2Z32A 3LI4A 4A0PA 3H72A 4GNAA 3P5BL 3K38A 4XHBA 1E8UA 4KS2A 2YA6A 2YA8A 1RWLA 3IAXA 4J9TA 4I00A 3WW9A 5HX0A 4CHBA 4FPYA 1X2RA 4CSDA 5FNUA 2AGSA 3Q6TA 1MS4A 4XJQA 2ISMA 2DYHA 4BBWA 4X4AA 1E8VA 4FPGA 1S18A 2F0ZA 4R40A 4WA5A 4YZ3A 4AHAA 3DR2A 4GNCA 4IFLX 3ZGCA 4MWUA 2IASA 1INXA 1Q7FA 3GVLA 1IUBA 3W09A 3SOBB 2HTVA 5GX4A 4B7QA 4WEFA 2H2UA 3B7EA 3DASA 1K32A 3A72A 2V91A 1W8OA 4FPFA 2F13A 5FWWA 2QWKA 1POOA 5D9CA 2VSMA 4IYGA 4M4VA 4D8SA 4YW3A 1DILA 2VK5A 1MS3A 4AGTA 3WN7A 3AMRA 1F8BA 2W5NA 3T1EA 4GN8A 4QN5A 4NN9A 3HLIA 1IVFA 4FPEA 4MX0A 3CL2A 1NCCN 3Q6PA 4XMIA 2YA7A 2F26A 4FPKA 2AEQA 4YW4A 1F8CA 1MWEA 2GVWA 2QWGA 2ZB6A 4GDJA 4FPCA 2F12A 3CYEA 3TICA 4WA4A 4CPMA 4CPNA 1N1VA 1Z50A 4B7MA 4FP3A 1VCUA 4QN7A 3LI5A 4MWVA 2XCYA 5GX2A 4CPLA 2G8SA 4ZY3A 1DIMA 1XOGA 3WWAA 1N1YA 4PWZA 1NPEA 2SILA 1N6EA 2F28A 1Z4WA 3H6JA 4UOUA 1W0PA 1EUUA 3U0SA 5D9BA 4ZLRA 3FVZA 1S0IA 2C4LA 1WP5A 3SALA 1OFZA 4D52A 1N7DA 4H53A 2BF6A 1IVBA 2W20A 2IATA 4MC7A 3LI3A 1IJQA 3SRGA 4IQKA 1INVA 3ALWA 4CPOA 2ZWAA 1X2JA 4AH4A 2XN4A 2FP9A 3A9GA 4YZ1A 1CRUA 3TI3A 2F24A 2ZW9A 2XZIA 4CH9A 3WDZA 5F72C 3L6VA 3VNGA 4O5SA 4B7NA 2IAXA 4GB1A 4HZVA 4M3MA 2VPJA 4MZAA 3S94A 4FZHA 4YZ5A 2IAWA 5HUKA 4YZ4A 1V3CA 2DG0A 3S8ZA 1EUTA 1KITA 1NMCA 2H2NA 3H73A 4NC5A 1PJXA 2F10A 1IVDA 2QWHA 4QN6A 4JF7A 2SIMA 1NSCA 2VWDA 3SREA 4Q6KA 2B8HA 1ZI0A 4FQ4A 5GX5A 4XE9A 2ZB5A 1NN2A 1USRA 2VW2A 4KS1A 4FOWA 4K1KA 5FZJA 4HZZA 5FNQA 3UC1A 4XJZA 4B7JA 2HTQA 1E1AA 2HT5A 2OJHA 2GVXA 4O5TA 3G4HA 2CMLA 3GVKA 2W8BA 4IFNX 4FPJA 2XZJA 1MS0A 3CKZA 3SANA 5D9DA 1EURA 4C1YA 2QWIA 2W5OA 1NCAN 4ZGCA 2F11A 2QWCA 4L7DA 4MJVA 2IAOA 4X47A 1V3EA 3ZGDA 2AEPA 1RWIA 4FOYA 1V2IA 1N1TA 3TI8A 4XHXA 2JKBA 2QWDA 1CRZA 5FZNA 3SOVA 2QE8A 2F25A 2QWBA 1INWA 4XOGA 1QBIA 4DG6A 1SUUA 1NCBN 2VSKA 1V0FA 2C4AA 4XJRA 5GTQA 3S2KA 5JYYA 1NMBN 3V65B 4FVKA 2ZZKA 1INFA 1E8TA 4FOVA 2YA4A 3BEQA 3B69A 3O9KA 4GNBA 1V04A 3H71A 4ASCA 3O4PA 2XZKA 2HT8A 3A9HA 4K1IA 1IVGA 1F8EA 2VVZA 2FPBA 2IVZA 7NN9A 3AMSA 4IMBA 1ZGKA 1V0EA 2IARA 3BYCA 3TIBA 5HUGA 4QN3A 2DG1A 1V0ZA 2BERA 2FHRA 2GVVA 4GN7A 2FP8A 4FPOB 4GZTA 2QWAA 4N1BA 4DGRA 1NSDA 2POOA 3A71A 3TC9A 1MZ5A 3JU4A 1SO7A 1V3DA 4NCSA 1S1DA 5H47A 4FP2A 4YW2A 4M4NA 3HRPA 5EO7A 1USXA 2GVUA 4MWRA 3ADEA 5CGJA 4L7CA 1NNAA 1IUCA 3TI6A 4MWYA 4XMAA 4MWLA 4MWJA 1L7GA 1V3BA 3KYAA 1NCDN 1XOEA 4X49A 3NN9A 4FPHA 1W0OA 2HTWA 4MZEA 4XMBA 5NN9A 1F8DA 1NSBA 3SOQA 4JMLA 4MWWA 4B7RA 1S0JA 2VW1A 3I1CA 3SILA 1W1XA 4WA3A 4QN4A 2VW0A 4MWQA 2GHSA 1MR5A 2A75A 5HUNA 1C9UA 4XIOA 1Z4YA 4GZPA 4K1HA 2QWEA 1INYA 2F27A 3G4EA 2HT7A 2F29A 1INGA 2HTYA 3O9JA 1MS9A 2W38A 2W8BB 2RKCA 3KGGA 2YA5A 4IN4A 5B2DA 4MWXA 3SLIA 4UF7A 2FPCA 4GJTA 3GVJA 4C1YB 5FNTA 4XJWA 1BJIA 4GZXA 3CL0A 1INHA 2VK7A 1Z4ZA 1B9SA 1EUSA
chains in the Genus database with same CATH topology
4D52C 5EO7A 1IUBA 4C1YA 4D4UA 4AHAA 4D52B 4C1YB 5EO8A 4CSDA 4UOUA 5H47A 4AH4A 1IUCA 4AGIA 4D52A 4AGTA 1OFZA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4D52 C;  5EO7 A;  1IUB A;  4C1Y A;  4D4U A;  4AHA A;  4D52 B;  4C1Y B;  5EO8 A;  4CSD A;  4UOU A;  5H47 A;  4AH4 A;  1IUC A;  4AGI A;  4D52 A;  4AGT A;  1OFZ A; 
#chains in the Genus database with same CATH topology
 4CPZ A;  3V64 C;  1MS5 A;  1N6F A;  4KS5 A;  2FLU X;  1CVM A;  1W21 A;  3ALX A;  4H52 A;  1C5K A;  4XJU A;  2YDT A;  4YY8 A;  3II7 A;  4K3Y A;  4G3N A;  1W20 A;  5FNR A;  1IVC A;  1H6L A;  1NMA N;  1L7H A;  3K37 A;  1B9V A;  4GEZ A;  1SLI A;  5M1Z A;  4YW1 A;  1N1S A;  4XJ8 A;  3HLH A;  1IVE A;  1NNC A;  4HW6 A;  4AGI A;  2X9M A;  4SLI A;  3TIA A;  1MS1 A;  2HU0 A;  4KS3 A;  3K36 A;  4HIZ A;  4GZQ A;  5F9T A;  4XJ9 A;  4HHQ A;  4YZ2 A;  2BZD A;  4GZO A;  2IAP A;  2AH2 A;  5EO8 A;  4Q1U A;  3PJQ A;  4D52 B;  3TI5 A;  4QNP A;  4GN9 A;  4WEG A;  5GX1 A;  2WOZ A;  4X6K A;  4HHO A;  4XIK A;  4YW5 A;  2IAU A;  3S8V A;  6NN9 A;  2HQS A;  4CPY A;  5GX3 A;  3NSS A;  1W8N A;  2HTU A;  1L7F A;  4MJU A;  1QLG A;  4FOQ A;  1N6D A;  3VNH A;  5HUM A;  4GZS A;  2P4O A;  4D52 C;  3NO0 A;  2HTR A;  1NNB A;  1WCQ A;  3TI4 A;  1A4G A;  4IFJ A;  2IAV A;  4GZW A;  1B9T A;  1A14 N;  3V1S A;  2HU4 A;  2IAQ A;  3Q6K A;  2DSO A;  4M4U A;  2VAQ A;  1A4Q A;  4L7B A;  5B2C A;  4XIL A;  4XJA A;  2YDP A;  2QWF A;  1SLL A;  1Z4V A;  4HZX A;  5EX7 A;  1MZ6 A;  1VCJ A;  3FW0 A;  4KS4 A;  4HZW A;  3OPZ A;  3K3A A;  4FPL A;  4K1J A;  1Z4X A;  3INB A;  4D4U A;  4GDI A;  3D12 A;  5FNS A;  4FJ6 A;  2SLI A;  1CQ1 A;  3K39 A;  2QWJ A;  4XYX A;  1MS8 A;  1U6D X;  2BAT A;  1WCS A;  3D11 A;  1SNT A;  4HZY A;  3E5Z A;  2VK6 A;  2Z32 A;  3LI4 A;  4A0P A;  3H72 A;  4GNA A;  3P5B L;  3K38 A;  4XHB A;  1E8U A;  4KS2 A;  2YA6 A;  2YA8 A;  1RWL A;  3IAX A;  4J9T A;  4I00 A;  3WW9 A;  5HX0 A;  4CHB A;  4FPY A;  1X2R A;  4CSD A;  5FNU A;  2AGS A;  3Q6T A;  1MS4 A;  4XJQ A;  2ISM A;  2DYH A;  4BBW A;  4X4A A;  1E8V A;  4FPG A;  1S18 A;  2F0Z A;  4R40 A;  4WA5 A;  4YZ3 A;  4AHA A;  3DR2 A;  4GNC A;  4IFL X;  3ZGC A;  4MWU A;  2IAS A;  1INX A;  1Q7F A;  3GVL A;  1IUB A;  3W09 A;  3SOB B;  2HTV A;  5GX4 A;  4B7Q A;  4WEF A;  2H2U A;  3B7E A;  3DAS A;  1K32 A;  3A72 A;  2V91 A;  1W8O A;  4FPF A;  2F13 A;  5FWW A;  2QWK A;  1POO A;  5D9C A;  2VSM A;  4IYG A;  4M4V A;  4D8S A;  4YW3 A;  1DIL A;  2VK5 A;  1MS3 A;  4AGT A;  3WN7 A;  3AMR A;  1F8B A;  2W5N A;  3T1E A;  4GN8 A;  4QN5 A;  4NN9 A;  3HLI A;  1IVF A;  4FPE A;  4MX0 A;  3CL2 A;  1NCC N;  3Q6P A;  4XMI A;  2YA7 A;  2F26 A;  4FPK A;  2AEQ A;  4YW4 A;  1F8C A;  1MWE A;  2GVW A;  2QWG A;  2ZB6 A;  4GDJ A;  4FPC A;  2F12 A;  3CYE A;  3TIC A;  4WA4 A;  4CPM A;  4CPN A;  1N1V A;  1Z50 A;  4B7M A;  4FP3 A;  1VCU A;  4QN7 A;  3LI5 A;  4MWV A;  2XCY A;  5GX2 A;  4CPL A;  2G8S A;  4ZY3 A;  1DIM A;  1XOG A;  3WWA A;  1N1Y A;  4PWZ A;  1NPE A;  2SIL A;  1N6E A;  2F28 A;  1Z4W A;  3H6J A;  4UOU A;  1W0P A;  1EUU A;  3U0S A;  5D9B A;  4ZLR A;  3FVZ A;  1S0I A;  2C4L A;  1WP5 A;  3SAL A;  1OFZ A;  4D52 A;  1N7D A;  4H53 A;  2BF6 A;  1IVB A;  2W20 A;  2IAT A;  4MC7 A;  3LI3 A;  1IJQ A;  3SRG A;  4IQK A;  1INV A;  3ALW A;  4CPO A;  2ZWA A;  1X2J A;  4AH4 A;  2XN4 A;  2FP9 A;  3A9G A;  4YZ1 A;  1CRU A;  3TI3 A;  2F24 A;  2ZW9 A;  2XZI A;  4CH9 A;  3WDZ A;  5F72 C;  3L6V A;  3VNG A;  4O5S A;  4B7N A;  2IAX A;  4GB1 A;  4HZV A;  4M3M A;  2VPJ A;  4MZA A;  3S94 A;  4FZH A;  4YZ5 A;  2IAW A;  5HUK A;  4YZ4 A;  1V3C A;  2DG0 A;  3S8Z A;  1EUT A;  1KIT A;  1NMC A;  2H2N A;  3H73 A;  4NC5 A;  1PJX A;  2F10 A;  1IVD A;  2QWH A;  4QN6 A;  4JF7 A;  2SIM A;  1NSC A;  2VWD A;  3SRE A;  4Q6K A;  2B8H A;  1ZI0 A;  4FQ4 A;  5GX5 A;  4XE9 A;  2ZB5 A;  1NN2 A;  1USR A;  2VW2 A;  4KS1 A;  4FOW A;  4K1K A;  5FZJ A;  4HZZ A;  5FNQ A;  3UC1 A;  4XJZ A;  4B7J A;  2HTQ A;  1E1A A;  2HT5 A;  2OJH A;  2GVX A;  4O5T A;  3G4H A;  2CML A;  3GVK A;  2W8B A;  4IFN X;  4FPJ A;  2XZJ A;  1MS0 A;  3CKZ A;  3SAN A;  5D9D A;  1EUR A;  4C1Y A;  2QWI A;  2W5O A;  1NCA N;  4ZGC A;  2F11 A;  2QWC A;  4L7D A;  4MJV A;  2IAO A;  4X47 A;  1V3E A;  3ZGD A;  2AEP A;  1RWI A;  4FOY A;  1V2I A;  1N1T A;  3TI8 A;  4XHX A;  2JKB A;  2QWD A;  1CRZ A;  5FZN A;  3SOV A;  2QE8 A;  2F25 A;  2QWB A;  1INW A;  4XOG A;  1QBI A;  4DG6 A;  1SUU A;  1NCB N;  2VSK A;  1V0F A;  2C4A A;  4XJR A;  5GTQ A;  3S2K A;  5JYY A;  1NMB N;  3V65 B;  4FVK A;  2ZZK A;  1INF A;  1E8T A;  4FOV A;  2YA4 A;  3BEQ A;  3B69 A;  3O9K A;  4GNB A;  1V04 A;  3H71 A;  4ASC A;  3O4P A;  2XZK A;  2HT8 A;  3A9H A;  4K1I A;  1IVG A;  1F8E A;  2VVZ A;  2FPB A;  2IVZ A;  7NN9 A;  3AMS A;  4IMB A;  1ZGK A;  1V0E A;  2IAR A;  3BYC A;  3TIB A;  5HUG A;  4QN3 A;  2DG1 A;  1V0Z A;  2BER A;  2FHR A;  2GVV A;  4GN7 A;  2FP8 A;  4FPO B;  4GZT A;  2QWA A;  4N1B A;  4DGR A;  1NSD A;  2POO A;  3A71 A;  3TC9 A;  1MZ5 A;  3JU4 A;  1SO7 A;  1V3D A;  4NCS A;  1S1D A;  5H47 A;  4FP2 A;  4YW2 A;  4M4N A;  3HRP A;  5EO7 A;  1USX A;  2GVU A;  4MWR A;  3ADE A;  5CGJ A;  4L7C A;  1NNA A;  1IUC A;  3TI6 A;  4MWY A;  4XMA A;  4MWL A;  4MWJ A;  1L7G A;  1V3B A;  3KYA A;  1NCD N;  1XOE A;  4X49 A;  3NN9 A;  4FPH A;  1W0O A;  2HTW A;  4MZE A;  4XMB A;  5NN9 A;  1F8D A;  1NSB A;  3SOQ A;  4JML A;  4MWW A;  4B7R A;  1S0J A;  2VW1 A;  3I1C A;  3SIL A;  1W1X A;  4WA3 A;  4QN4 A;  2VW0 A;  4MWQ A;  2GHS A;  1MR5 A;  2A75 A;  5HUN A;  1C9U A;  4XIO A;  1Z4Y A;  4GZP A;  4K1H A;  2QWE A;  1INY A;  2F27 A;  3G4E A;  2HT7 A;  2F29 A;  1ING A;  2HTY A;  3O9J A;  1MS9 A;  2W38 A;  2W8B B;  2RKC A;  3KGG A;  2YA5 A;  4IN4 A;  5B2D A;  4MWX A;  3SLI A;  4UF7 A;  2FPC A;  4GJT A;  3GVJ A;  4C1Y B;  5FNT A;  4XJW A;  1BJI A;  4GZX A;  3CL0 A;  1INH A;  2VK7 A;  1Z4Z A;  1B9S A;  1EUS A; 
#chains in the Genus database with same CATH homology
 4D52 C;  5EO7 A;  1IUB A;  4C1Y A;  4D4U A;  4AHA A;  4D52 B;  4C1Y B;  5EO8 A;  4CSD A;  4UOU A;  5H47 A;  4AH4 A;  1IUC A;  4AGI A;  4D52 A;  4AGT A;  1OFZ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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