4AP8A

Crystal structure of human molybdopterin synthase catalytic subunit (mocs2b)
Total Genus 42
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
42
sequence length
134
structure length
134
Chain Sequence
EVEEKSKDVINFTAEKLSVDEVSQLVISPLCGAISLFVGTTRNNFEGKKVISLEYEAYLPMAENEVRKICSDIRQKWPVKHIAVFHRLGLVPVSEASIIIAVSSAHRAASLEAVSYAIDTLKAKVPIWKKEIYE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords MOLYBDOPTERIN SYNTHASE CATALYTIC SUBUNIT
publication title Crystal Structure of Human Molybdopterin Synthase Catalytic Subunit (Mocs2B)
rcsb
source organism Homo sapiens
total genus 42
structure length 134
sequence length 134
chains with identical sequence B, C, D
ec nomenclature ec 2.8.1.12: Molybdopterin synthase.
pdb deposition date 2012-03-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02391 MoaE MoaE protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.1170.40 Alpha Beta Alpha-Beta Complex Aldehyde Oxidoreductase; domain 3 Molybdopterin biosynthesis MoaE subunit 4ap8A00
4AP8A 3BIIE 1FMAE 1NVJA 1NVIE 2QIEA 3RPFA 5MPOC 2Q5WE 2WP4A 1FM0E 2OMDA
chains in the Genus database with same CATH superfamily
3WNZA 4AP8A 1FMAE 5AYZA 3TQVA 1N5XA 5GADN 3CD6H 5HUPA 2WK6A 3I55H 1YTKA 2JBMA 3C2EA 3CMEH 3PAJA 5HULA 4WFBJ 1NJIJ 1VQ5H 1N8RJ 4U67J 1OTPA 3NS1C 5AN9F 5GAHN 1VQ4H 3CC7H 3CCMH 2OTLH 1N61B 1FIQC 5EP8A 1JJ2H 1NVJA 1QPOA 1YJNH 5JVHJ 3CCUH 1VQ9H 1YTEA 3CCJH 5HUOA 3NRZC 1VQOH 1YTDA 3FC4A 2ZJQJ 3H5QA 5MLCO 3CCQH 4YEKA 3NVVC 1WYGA 3DLLJ 2Q5WE 2WP4A 3C2VA 4UY8M 3VMMA 3CPWH 1AZYA 3I56H 3CCLH 4I9AA 1O4UA 4US8A 2E3TA 1KD1J 5HL7J 5DM6J 1V97A 1YHQH 1YI2H 1Q7YJ 1M90J 1VQ8H 1YIJH 4WFAJ 3NVYC 1M1KJ 3NVWC 3C2FA 3CCVH 1N60B 3BIIE 2W54B 4GA6A 3CMAH 5AYXA 1N63B 1QPQA 1QPNA 1Y69K 3G6EH 2B7PA 4GA5A 1S72H 1SB3A 2WK5A 1JRPB 1VQ6H 1VDVA 3EUB4 5MPOC 4US9A 2QA4H 5DM7J 3OW2H 2OTJH 1W2BH 1VQPH 1ZXIB 2B7NA 3L0GA 1Q86J 4X46A 3PIOJ 3CCSH 4C7YA 4YYYA 3CF5J 1KC8J 1SIJA 4EADA 1RM6A 2PA2A 1VQLH 2B7QA 3CXCH 4WCEJ 1FM0E 4C80A 5JVGJ 2W55B 3WO1A 5H1SO 2QEXH 4GA4A 3ETRC 3FAHA 1JROB 1N5WB 4EAFA 3AM9A 1VQKH 3CC4H 1YJWH 4ZOHA 4IOCJ 2OMDA 3CCEH 2W3SB 3L4PA 3G4SH 3PIPJ 2I14A 2TPTA 1BRWA 4LHMA 2I1OA 1QPRA 1FFUB 1VQNH 1WKIA 4KWVA 4WFNJ 1YJ9H 3C2OA 4IO9J 1DGJA 1QAPA 1FO4A 1QVGH 1NVIE 3G71H 1Q81J 1YITH 3NVZC 3B9JC 4KWWA 3AMZA 1Q82J 2J0FA 1UOUA 2QIEA 3RPFA 5GAEN 3SR6C 3J7ZM 1N62B 1QVFH 5GAGN 4IOAJ 1FFVB 1VLBA 1K8AJ 3AN1A 2ZJPJ 5AYYA 3CC2H 1VQ7H 1K9MJ 2DSJA 4XR5A 2W3RB 1K73J 1VQMH 4WF9J 4C7ZA 3C2RA 3CCRH 5EY3A 1KQSH 1X1OA 4USAA 3WO0A 2ZJRJ 3GNNA
chains in the Genus database with same CATH topology
4AP8A 3BIIE 1FMAE 1NVJA 1NVIE 2QIEA 3RPFA 5MPOC 2Q5WE 2WP4A 1FM0E 2OMDA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4AP8 A;  3BII E;  1FMA E;  1NVJ A;  1NVI E;  2QIE A;  3RPF A;  5MPO C;  2Q5W E;  2WP4 A;  1FM0 E;  2OMD A; 
#chains in the Genus database with same CATH topology
 3WNZ A;  4AP8 A;  1FMA E;  5AYZ A;  3TQV A;  1N5X A;  5GAD N;  3CD6 H;  5HUP A;  2WK6 A;  3I55 H;  1YTK A;  2JBM A;  3C2E A;  3CME H;  3PAJ A;  5HUL A;  4WFB J;  1NJI J;  1VQ5 H;  1N8R J;  4U67 J;  1OTP A;  3NS1 C;  5AN9 F;  5GAH N;  1VQ4 H;  3CC7 H;  3CCM H;  2OTL H;  1N61 B;  1FIQ C;  5EP8 A;  1JJ2 H;  1NVJ A;  1QPO A;  1YJN H;  5JVH J;  3CCU H;  1VQ9 H;  1YTE A;  3CCJ H;  5HUO A;  3NRZ C;  1VQO H;  1YTD A;  3FC4 A;  2ZJQ J;  3H5Q A;  5MLC O;  3CCQ H;  4YEK A;  3NVV C;  1WYG A;  3DLL J;  2Q5W E;  2WP4 A;  3C2V A;  4UY8 M;  3VMM A;  3CPW H;  1AZY A;  3I56 H;  3CCL H;  4I9A A;  1O4U A;  4US8 A;  2E3T A;  1KD1 J;  5HL7 J;  5DM6 J;  1V97 A;  1YHQ H;  1YI2 H;  1Q7Y J;  1M90 J;  1VQ8 H;  1YIJ H;  4WFA J;  3NVY C;  1M1K J;  3NVW C;  3C2F A;  3CCV H;  1N60 B;  3BII E;  2W54 B;  4GA6 A;  3CMA H;  5AYX A;  1N63 B;  1QPQ A;  1QPN A;  1Y69 K;  3G6E H;  2B7P A;  4GA5 A;  1S72 H;  1SB3 A;  2WK5 A;  1JRP B;  1VQ6 H;  1VDV A;  3EUB 4;  5MPO C;  4US9 A;  2QA4 H;  5DM7 J;  3OW2 H;  2OTJ H;  1W2B H;  1VQP H;  1ZXI B;  2B7N A;  3L0G A;  1Q86 J;  4X46 A;  3PIO J;  3CCS H;  4C7Y A;  4YYY A;  3CF5 J;  1KC8 J;  1SIJ A;  4EAD A;  1RM6 A;  2PA2 A;  1VQL H;  2B7Q A;  3CXC H;  4WCE J;  1FM0 E;  4C80 A;  5JVG J;  2W55 B;  3WO1 A;  5H1S O;  2QEX H;  4GA4 A;  3ETR C;  3FAH A;  1JRO B;  1N5W B;  4EAF A;  3AM9 A;  1VQK H;  3CC4 H;  1YJW H;  4ZOH A;  4IOC J;  2OMD A;  3CCE H;  2W3S B;  3L4P A;  3G4S H;  3PIP J;  2I14 A;  2TPT A;  1BRW A;  4LHM A;  2I1O A;  1QPR A;  1FFU B;  1VQN H;  1WKI A;  4KWV A;  4WFN J;  1YJ9 H;  3C2O A;  4IO9 J;  1DGJ A;  1QAP A;  1FO4 A;  1QVG H;  1NVI E;  3G71 H;  1Q81 J;  1YIT H;  3NVZ C;  3B9J C;  4KWW A;  3AMZ A;  1Q82 J;  2J0F A;  1UOU A;  2QIE A;  3RPF A;  5GAE N;  3SR6 C;  3J7Z M;  1N62 B;  1QVF H;  5GAG N;  4IOA J;  1FFV B;  1VLB A;  1K8A J;  3AN1 A;  2ZJP J;  5AYY A;  3CC2 H;  1VQ7 H;  1K9M J;  2DSJ A;  4XR5 A;  2W3R B;  1K73 J;  1VQM H;  4WF9 J;  4C7Z A;  3C2R A;  3CCR H;  5EY3 A;  1KQS H;  1X1O A;  4USA A;  3WO0 A;  2ZJR J;  3GNN A; 
#chains in the Genus database with same CATH homology
 4AP8 A;  3BII E;  1FMA E;  1NVJ A;  1NVI E;  2QIE A;  3RPF A;  5MPO C;  2Q5W E;  2WP4 A;  1FM0 E;  2OMD A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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