4AY9B

Structure of follicle-stimulating hormone in complex with the entire ectodomain of its receptor
Total Genus 7
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
7
sequence length
107
structure length
107
Chain Sequence
NSCELTNITIAIEKEECRFCISINTTWCAGYCYTRDLVYKDPARPKIQKTCTFKELVYETVRVPGCAHHADSLYTYPVATQCHCGKCDSDSTDCTVRGLGPSYCSFG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hormone/receptor
molecule keywords GLYCOPROTEIN HORMONES, ALPHA POLYPEPTIDE
publication title Structure of Follicle-Stimulating Hormone in Complex with the Entire Ectodomain of its Receptor.
pubmed doi rcsb
source organism Homo sapiens
total genus 7
structure length 107
sequence length 107
chains with identical sequence E, H
ec nomenclature
pdb deposition date 2012-06-19
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.90.10 Mainly Beta Ribbon Cystine Knot Cytokines, subunit B Cystine-knot cytokines 4ay9B00
1BTGA 2BHKA 1PDGA 2R52A 2V5EB 5HI3A 5HK5A 3BUKA 4ZFFC 3HH2A 1WQ8A 1M4UL 2TGIA 5BQBA 4QCIC 5FV1V 1QFWB 5HHDA 1B8MA 1DZ7A 1MKKA 1REWA 1FL7B 4MPLA 3MJKA 2QCQA 3MJGA 1HRPB 4UI2B 5E4GA 4QAFC 3IJ2A 1KTZA 3SEKB 1B98A 3EVSB 2GNNA 1B8KA 3BDYV 1BJ1V 4AY9B 1BNDB 1REUA 5HHXA 4EDWV 3KFDA 2GOOA 2B0UA 5BPUA 1WWWV 1CZ8V 4YCIC 1QTYR 1HD4A 2ASKA 4HQXA 4BV4L 1BETA 1VPFA 1RV6V 1SGFB 1LX5A 2VWEA 1NYSB 2ARPA 3S1KV 1E9JA 1TZHV 3QB4A 4HR9A 3FUBB 1S4YB 2XACA 5BQ8A 1TGKA 4EC7A 2QCWA 2R53A 1HCNA 4KV5A 4XPJA 1TZIV 1FLTV 5F3BC 2QJAA 2VXSA 5BQEB 3RJRA 1AOCA 1BMPA 2H64A 1HCFA 1WQ9B 5FV2V 4GLSE 4WPBA 1XWDA 4FAOA 2QR0C 2XV7A 1TGJA 1KLCA 4MQWA 1SG1A 4UHZA 1KATW 1FL7A 5HI5A 2GH0C 1AGQA 1HRPA 2FJGV 2GYZA 5HHCA 1NYUB 4UI1A 1B8MB 2X1WA 1JPYA 4GLNE 5BQ8B 4LXRJ 3QTKA 4ZBNA 1HCNB 5AEJA 2ARVA 5HI4A 4EDXV 5HHVA 2X1XE 1NT3A 1VPPV 2VPFA 4YCGC 4KXZA 1MKGA 4EAXA 2FJHV 5JZ7A 4HQUA 4KZNA 2P6AA 2IFGE 1XWDB 1TFGA 4LXSJ 1MJVA 1M4UA 5HK5E 1ZKZA 4MIDA 1QFWA 1FZVA 1WAQA 2GYRA 4QHUC 2QJBA 4MQWB 4N1DA 2QJ9A 3S1BV 4HSAA 3P9WA 1ES7A 3E07A 3B4VA 1KLAA 3EO1C 2PJYA 4EFVA 4X1JA 2C7WA 3V2AA 2KD3A 5BQEA 4UHYA 2H62A 4AY9A 4UI0A 3V6BA 1BNDA 1WQ9A 5BQ8D 5BQCA 3BK3A 3JVFA 3BMPA 5F3HI 1LXIA
chains in the Genus database with same CATH superfamily
1BTGA 2BHKA 1PDGA 2R52A 2V5EB 5HI3A 5HK5A 3BUKA 4ZFFC 3HH2A 1WQ8A 1M4UL 2TGIA 5BQBA 4QCIC 5FV1V 1QFWB 5HHDA 1B8MA 1DZ7A 1MKKA 1REWA 1FL7B 4MPLA 3MJKA 2QCQA 3MJGA 1HRPB 4UI2B 5E4GA 4QAFC 3IJ2A 1KTZA 3SEKB 1B98A 3EVSB 2GNNA 1B8KA 3BDYV 1BJ1V 4AY9B 1BNDB 1REUA 5HHXA 4EDWV 3KFDA 2GOOA 2B0UA 5BPUA 1WWWV 1CZ8V 4YCIC 1QTYR 1HD4A 2ASKA 4HQXA 4BV4L 1BETA 1VPFA 1RV6V 1SGFB 1LX5A 2VWEA 1NYSB 2ARPA 3S1KV 1E9JA 1TZHV 3QB4A 4HR9A 3FUBB 1S4YB 2XACA 5BQ8A 1TGKA 4EC7A 2QCWA 2R53A 1HCNA 4KV5A 4XPJA 1TZIV 1FLTV 5F3BC 2QJAA 2VXSA 5BQEB 3RJRA 1AOCA 1BMPA 2H64A 1HCFA 1WQ9B 5FV2V 4GLSE 4WPBA 1XWDA 4FAOA 2QR0C 2XV7A 1TGJA 1KLCA 4MQWA 1SG1A 4UHZA 1KATW 1FL7A 5HI5A 2GH0C 1AGQA 1HRPA 2FJGV 2GYZA 5HHCA 1NYUB 4UI1A 1B8MB 2X1WA 1JPYA 4GLNE 5BQ8B 4LXRJ 3QTKA 4ZBNA 1HCNB 5AEJA 2ARVA 5HI4A 4EDXV 5HHVA 2X1XE 1NT3A 1VPPV 2VPFA 4YCGC 4KXZA 1MKGA 4EAXA 2FJHV 5JZ7A 4HQUA 4KZNA 2P6AA 2IFGE 1XWDB 1TFGA 4LXSJ 1MJVA 1M4UA 5HK5E 1ZKZA 4MIDA 1QFWA 1FZVA 1WAQA 2GYRA 4QHUC 2QJBA 4MQWB 4N1DA 2QJ9A 3S1BV 4HSAA 3P9WA 1ES7A 3E07A 3B4VA 1KLAA 3EO1C 2PJYA 4EFVA 4X1JA 2C7WA 3V2AA 2KD3A 5BQEA 4UHYA 2H62A 4AY9A 4UI0A 3V6BA 1BNDA 1WQ9A 5BQ8D 5BQCA 3BK3A 3JVFA 3BMPA 5F3HI 1LXIA
chains in the Genus database with same CATH topology
1BTGA 2BHKA 1PDGA 2R52A 2V5EB 5HI3A 5HK5A 3BUKA 4ZFFC 3HH2A 1WQ8A 1M4UL 2TGIA 5BQBA 4QCIC 5FV1V 1QFWB 5HHDA 1B8MA 1DZ7A 1MKKA 1REWA 1FL7B 4MPLA 3MJKA 2QCQA 3MJGA 1HRPB 4UI2B 5E4GA 4QAFC 3IJ2A 1KTZA 3SEKB 1B98A 3EVSB 2GNNA 1B8KA 3BDYV 1BJ1V 4AY9B 1BNDB 1REUA 5HHXA 4EDWV 3KFDA 2GOOA 2B0UA 5BPUA 1WWWV 1CZ8V 4YCIC 1QTYR 1HD4A 2ASKA 4HQXA 4BV4L 1BETA 1VPFA 1RV6V 1SGFB 1LX5A 2VWEA 1NYSB 2ARPA 3S1KV 1E9JA 1TZHV 3QB4A 4HR9A 3FUBB 1S4YB 2XACA 5BQ8A 1TGKA 4EC7A 2QCWA 2R53A 1HCNA 4KV5A 4XPJA 1TZIV 1FLTV 5F3BC 2QJAA 2VXSA 5BQEB 3RJRA 1AOCA 1BMPA 2H64A 1HCFA 1WQ9B 5FV2V 4GLSE 4WPBA 1XWDA 4FAOA 2QR0C 2XV7A 1TGJA 1KLCA 4MQWA 1SG1A 4UHZA 1KATW 1FL7A 5HI5A 2GH0C 1AGQA 1HRPA 2FJGV 2GYZA 5HHCA 1NYUB 4UI1A 1B8MB 2X1WA 1JPYA 4GLNE 5BQ8B 4LXRJ 3QTKA 4ZBNA 1HCNB 5AEJA 2ARVA 5HI4A 4EDXV 5HHVA 2X1XE 1NT3A 1VPPV 2VPFA 4YCGC 4KXZA 1MKGA 4EAXA 2FJHV 5JZ7A 4HQUA 4KZNA 2P6AA 2IFGE 1XWDB 1TFGA 4LXSJ 1MJVA 1M4UA 5HK5E 1ZKZA 4MIDA 1QFWA 1FZVA 1WAQA 2GYRA 4QHUC 2QJBA 4MQWB 4N1DA 2QJ9A 3S1BV 4HSAA 3P9WA 1ES7A 3E07A 3B4VA 1KLAA 3EO1C 2PJYA 4EFVA 4X1JA 2C7WA 3V2AA 2KD3A 5BQEA 4UHYA 2H62A 4AY9A 4UI0A 3V6BA 1BNDA 1WQ9A 5BQ8D 5BQCA 3BK3A 3JVFA 3BMPA 5F3HI 1LXIA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1BTG A;  2BHK A;  1PDG A;  2R52 A;  2V5E B;  5HI3 A;  5HK5 A;  3BUK A;  4ZFF C;  3HH2 A;  1WQ8 A;  1M4U L;  2TGI A;  5BQB A;  4QCI C;  5FV1 V;  1QFW B;  5HHD A;  1B8M A;  1DZ7 A;  1MKK A;  1REW A;  1FL7 B;  4MPL A;  3MJK A;  2QCQ A;  3MJG A;  1HRP B;  4UI2 B;  5E4G A;  4QAF C;  3IJ2 A;  1KTZ A;  3SEK B;  1B98 A;  3EVS B;  2GNN A;  1B8K A;  3BDY V;  1BJ1 V;  4AY9 B;  1BND B;  1REU A;  5HHX A;  4EDW V;  3KFD A;  2GOO A;  2B0U A;  5BPU A;  1WWW V;  1CZ8 V;  4YCI C;  1QTY R;  1HD4 A;  2ASK A;  4HQX A;  4BV4 L;  1BET A;  1VPF A;  1RV6 V;  1SGF B;  1LX5 A;  2VWE A;  1NYS B;  2ARP A;  3S1K V;  1E9J A;  1TZH V;  3QB4 A;  4HR9 A;  3FUB B;  1S4Y B;  2XAC A;  5BQ8 A;  1TGK A;  4EC7 A;  2QCW A;  2R53 A;  1HCN A;  4KV5 A;  4XPJ A;  1TZI V;  1FLT V;  5F3B C;  2QJA A;  2VXS A;  5BQE B;  3RJR A;  1AOC A;  1BMP A;  2H64 A;  1HCF A;  1WQ9 B;  5FV2 V;  4GLS E;  4WPB A;  1XWD A;  4FAO A;  2QR0 C;  2XV7 A;  1TGJ A;  1KLC A;  4MQW A;  1SG1 A;  4UHZ A;  1KAT W;  1FL7 A;  5HI5 A;  2GH0 C;  1AGQ A;  1HRP A;  2FJG V;  2GYZ A;  5HHC A;  1NYU B;  4UI1 A;  1B8M B;  2X1W A;  1JPY A;  4GLN E;  5BQ8 B;  4LXR J;  3QTK A;  4ZBN A;  1HCN B;  5AEJ A;  2ARV A;  5HI4 A;  4EDX V;  5HHV A;  2X1X E;  1NT3 A;  1VPP V;  2VPF A;  4YCG C;  4KXZ A;  1MKG A;  4EAX A;  2FJH V;  5JZ7 A;  4HQU A;  4KZN A;  2P6A A;  2IFG E;  1XWD B;  1TFG A;  4LXS J;  1MJV A;  1M4U A;  5HK5 E;  1ZKZ A;  4MID A;  1QFW A;  1FZV A;  1WAQ A;  2GYR A;  4QHU C;  2QJB A;  4MQW B;  4N1D A;  2QJ9 A;  3S1B V;  4HSA A;  3P9W A;  1ES7 A;  3E07 A;  3B4V A;  1KLA A;  3EO1 C;  2PJY A;  4EFV A;  4X1J A;  2C7W A;  3V2A A;  2KD3 A;  5BQE A;  4UHY A;  2H62 A;  4AY9 A;  4UI0 A;  3V6B A;  1BND A;  1WQ9 A;  5BQ8 D;  5BQC A;  3BK3 A;  3JVF A;  3BMP A;  5F3H I;  1LXI A; 
#chains in the Genus database with same CATH topology
 1BTG A;  2BHK A;  1PDG A;  2R52 A;  2V5E B;  5HI3 A;  5HK5 A;  3BUK A;  4ZFF C;  3HH2 A;  1WQ8 A;  1M4U L;  2TGI A;  5BQB A;  4QCI C;  5FV1 V;  1QFW B;  5HHD A;  1B8M A;  1DZ7 A;  1MKK A;  1REW A;  1FL7 B;  4MPL A;  3MJK A;  2QCQ A;  3MJG A;  1HRP B;  4UI2 B;  5E4G A;  4QAF C;  3IJ2 A;  1KTZ A;  3SEK B;  1B98 A;  3EVS B;  2GNN A;  1B8K A;  3BDY V;  1BJ1 V;  4AY9 B;  1BND B;  1REU A;  5HHX A;  4EDW V;  3KFD A;  2GOO A;  2B0U A;  5BPU A;  1WWW V;  1CZ8 V;  4YCI C;  1QTY R;  1HD4 A;  2ASK A;  4HQX A;  4BV4 L;  1BET A;  1VPF A;  1RV6 V;  1SGF B;  1LX5 A;  2VWE A;  1NYS B;  2ARP A;  3S1K V;  1E9J A;  1TZH V;  3QB4 A;  4HR9 A;  3FUB B;  1S4Y B;  2XAC A;  5BQ8 A;  1TGK A;  4EC7 A;  2QCW A;  2R53 A;  1HCN A;  4KV5 A;  4XPJ A;  1TZI V;  1FLT V;  5F3B C;  2QJA A;  2VXS A;  5BQE B;  3RJR A;  1AOC A;  1BMP A;  2H64 A;  1HCF A;  1WQ9 B;  5FV2 V;  4GLS E;  4WPB A;  1XWD A;  4FAO A;  2QR0 C;  2XV7 A;  1TGJ A;  1KLC A;  4MQW A;  1SG1 A;  4UHZ A;  1KAT W;  1FL7 A;  5HI5 A;  2GH0 C;  1AGQ A;  1HRP A;  2FJG V;  2GYZ A;  5HHC A;  1NYU B;  4UI1 A;  1B8M B;  2X1W A;  1JPY A;  4GLN E;  5BQ8 B;  4LXR J;  3QTK A;  4ZBN A;  1HCN B;  5AEJ A;  2ARV A;  5HI4 A;  4EDX V;  5HHV A;  2X1X E;  1NT3 A;  1VPP V;  2VPF A;  4YCG C;  4KXZ A;  1MKG A;  4EAX A;  2FJH V;  5JZ7 A;  4HQU A;  4KZN A;  2P6A A;  2IFG E;  1XWD B;  1TFG A;  4LXS J;  1MJV A;  1M4U A;  5HK5 E;  1ZKZ A;  4MID A;  1QFW A;  1FZV A;  1WAQ A;  2GYR A;  4QHU C;  2QJB A;  4MQW B;  4N1D A;  2QJ9 A;  3S1B V;  4HSA A;  3P9W A;  1ES7 A;  3E07 A;  3B4V A;  1KLA A;  3EO1 C;  2PJY A;  4EFV A;  4X1J A;  2C7W A;  3V2A A;  2KD3 A;  5BQE A;  4UHY A;  2H62 A;  4AY9 A;  4UI0 A;  3V6B A;  1BND A;  1WQ9 A;  5BQ8 D;  5BQC A;  3BK3 A;  3JVF A;  3BMP A;  5F3H I;  1LXI A; 
#chains in the Genus database with same CATH homology
 1BTG A;  2BHK A;  1PDG A;  2R52 A;  2V5E B;  5HI3 A;  5HK5 A;  3BUK A;  4ZFF C;  3HH2 A;  1WQ8 A;  1M4U L;  2TGI A;  5BQB A;  4QCI C;  5FV1 V;  1QFW B;  5HHD A;  1B8M A;  1DZ7 A;  1MKK A;  1REW A;  1FL7 B;  4MPL A;  3MJK A;  2QCQ A;  3MJG A;  1HRP B;  4UI2 B;  5E4G A;  4QAF C;  3IJ2 A;  1KTZ A;  3SEK B;  1B98 A;  3EVS B;  2GNN A;  1B8K A;  3BDY V;  1BJ1 V;  4AY9 B;  1BND B;  1REU A;  5HHX A;  4EDW V;  3KFD A;  2GOO A;  2B0U A;  5BPU A;  1WWW V;  1CZ8 V;  4YCI C;  1QTY R;  1HD4 A;  2ASK A;  4HQX A;  4BV4 L;  1BET A;  1VPF A;  1RV6 V;  1SGF B;  1LX5 A;  2VWE A;  1NYS B;  2ARP A;  3S1K V;  1E9J A;  1TZH V;  3QB4 A;  4HR9 A;  3FUB B;  1S4Y B;  2XAC A;  5BQ8 A;  1TGK A;  4EC7 A;  2QCW A;  2R53 A;  1HCN A;  4KV5 A;  4XPJ A;  1TZI V;  1FLT V;  5F3B C;  2QJA A;  2VXS A;  5BQE B;  3RJR A;  1AOC A;  1BMP A;  2H64 A;  1HCF A;  1WQ9 B;  5FV2 V;  4GLS E;  4WPB A;  1XWD A;  4FAO A;  2QR0 C;  2XV7 A;  1TGJ A;  1KLC A;  4MQW A;  1SG1 A;  4UHZ A;  1KAT W;  1FL7 A;  5HI5 A;  2GH0 C;  1AGQ A;  1HRP A;  2FJG V;  2GYZ A;  5HHC A;  1NYU B;  4UI1 A;  1B8M B;  2X1W A;  1JPY A;  4GLN E;  5BQ8 B;  4LXR J;  3QTK A;  4ZBN A;  1HCN B;  5AEJ A;  2ARV A;  5HI4 A;  4EDX V;  5HHV A;  2X1X E;  1NT3 A;  1VPP V;  2VPF A;  4YCG C;  4KXZ A;  1MKG A;  4EAX A;  2FJH V;  5JZ7 A;  4HQU A;  4KZN A;  2P6A A;  2IFG E;  1XWD B;  1TFG A;  4LXS J;  1MJV A;  1M4U A;  5HK5 E;  1ZKZ A;  4MID A;  1QFW A;  1FZV A;  1WAQ A;  2GYR A;  4QHU C;  2QJB A;  4MQW B;  4N1D A;  2QJ9 A;  3S1B V;  4HSA A;  3P9W A;  1ES7 A;  3E07 A;  3B4V A;  1KLA A;  3EO1 C;  2PJY A;  4EFV A;  4X1J A;  2C7W A;  3V2A A;  2KD3 A;  5BQE A;  4UHY A;  2H62 A;  4AY9 A;  4UI0 A;  3V6B A;  1BND A;  1WQ9 A;  5BQ8 D;  5BQC A;  3BK3 A;  3JVF A;  3BMP A;  5F3H I;  1LXI A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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