4AYEA

Structure of a complex between ccps 6 and 7 of human complement factor h and neisseria meningitidis fhbp variant 1 e283ae304a mutant
Total Genus 23
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
23
sequence length
123
structure length
123
Chain Sequence
TLKPCDYPDIKHGGLYHENMRRPYFPVAVGKYYSYYCDEHFETPSGSYWDHIHCTQDGWSPAVPCLRKCYFPYLENGYNQNHGRKFVQGKSIDVACHPGYALPKAQTTVTCMENGWSPTPRCI
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Immune system
molecule keywords COMPLEMENT FACTOR H
publication title Design and Evaluation of Meningococcal Vaccines Through Structure-Based Modification of Host and Pathogen Molecules.
pubmed doi rcsb
source organism Homo sapiens
total genus 23
structure length 123
sequence length 123
chains with identical sequence B, E
ec nomenclature
pdb deposition date 2012-06-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00084 Sushi Sushi repeat (SCR repeat)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.70.10 Mainly Beta Ribbon Complement Module; domain 1 Complement Module, domain 1 4ayeA02
2.10.70.10 Mainly Beta Ribbon Complement Module; domain 1 Complement Module, domain 1 4ayeA01
2W81A 3IX0A 4LOTA 1MD7A 2YRAA 2MCYA 2MCZA 5JPMG 1NWVA 2ERJA 2UWNA 4AYEA 2CG7A 2EC3A 4YNXA 3ERBA 1E88A 1FBRA 2JRAA 1LY2A 3M7PA 2IZ4A 1Q3XA 2XRBA 2CKUA 4IGDA 4B2SA 1OJVA 1G4FA 4KKDA 3OEDC 2B5ID 4AYMA 2RLQA 4LOSA 3T5OA 1HFIA 1CKLA 3L89M 2G7IA 5HZPB 1U5MA 4DJZA 2XWJI 2XRDA 1GHQB 1OK2A 2CG6A 1VVCA 4FXGG 3KZJA 3MQLA 4B2RA 2IZ3A 4AYIA 3OP8A 2RLPA 4ZH1D 1HCCA 2KRIA 1OK9A 2BZMA 3O8EB 3KXVA 1SRZA 3GXEA 1ELVA 1G4GA 2W80A 3ZD2A 1UOTP 2WIIC 3RJ3D 4ONTD 3NFPI 4JHSA 3R62A 4K12A 1GKNA 1C1ZA 1O9AA 4C16A 5HYPA 3INBC 4J38B 5FO8C 5I0QB 1QO6A 2EHFA 2RL0A 1OK3A 3SW0X 4AYDA 1TPGA 2JGWA 1HFHA 3GOVA 4PZ5A 2QY0A 1MD8A 3TVJA 2KMSA 1E8BA 1H2PP 1H04P 1SS2A 1GPZA 4F4OC 1VVDA 5HYUB 2V8EA 5HYTB 2O39C 2JGXA 1QUBA 1GKGA 4CSYA 2XQWC 1OJYA 1H2QP 2RKYA 4MUCA 2RKZA 1H03P 3ZD1A 1PPQA 3ZRZA 4WJG2 1TPNA 2XWBF 1QGBA 3CALA 3OXUD 1OJWA 1E5GA 2YBYA 2A55A 1OK1A 3IU3I 4A5WB 1Z92B 1TPMA 2LOJA 3EJHA 1ZJKA
chains in the Genus database with same CATH superfamily
2W81A 3FGTA 3IX0A 4LOTA 1MD7A 2YRAA 2MCYA 2MCZA 5JPMG 1NWVA 2ERJA 2UWNA 4AYEA 2CG7A 2EC3A 4YNXA 3ERBA 1E88A 1FBRA 4MSLA 2JRAA 1LY2A 3M7PA 3K3TA 2IZ4A 1Q3XA 2XRBA 2CKUA 4IGDA 2Y8TA 4B2SA 1OJVA 1G4FA 4KKDA 3OEDC 2B5ID 4APLA 4AYMA 2RLQA 4LOSA 3T5OA 1HFIA 1CKLA 3L89M 2G7IA 5HZPB 4YIZA 1U5MA 4DJZA 2XWJI 5DN5A 2XRDA 1GHQB 2ZYCA 1OK2A 2CG6A 1VVCA 4FXGG 3KZJA 3MQLA 4B2RA 2IZ3A 3NJAA 4AYIA 3OP8A 2RLPA 4ZH1D 3VWOA 1HCCA 2KRIA 1OK9A 2BZMA 3WSXA 4N7EA 3O8EB 3KXVA 1SRZA 3GXEA 1ELVA 1G4GA 2W80A 3ZD2A 1UOTP 2WIIC 3RJ3D 3WSYA 4ONTD 3NFPI 4JHSA 3R62A 4K12A 1GKNA 1C1ZA 1O9AA 4C16A 5HYPA 3INBC 4J38B 3ZLEA 5FO8C 5I0QB 1QO6A 2EHFA 2RL0A 1OK3A 3SW0X 4AYDA 1TPGA 2JGWA 4BWCA 1HFHA 3ZLDA 3GOVA 2Y8RA 4PZ5A 2QY0A 1MD8A 3TVJA 2KMSA 2Y8SA 1E8BA 1H2PP 1H04P 1SS2A 1GPZA 4F4OC 1VVDA 5HYUB 2V8EA 5HYTB 2O39C 2JGXA 1QUBA 1GKGA 4CSYA 2XQWC 1OJYA 1H2QP 2RKYA 4MUCA 2RKZA 3F6KA 1H03P 3ZD1A 1PPQA 3ZRZA 4PO7A 2X2ZA 1TPNA 2XWBF 1QGBA 3CALA 3OXUD 1OJWA 4WJG2 1E5GA 1RLHA 3CI0J 2YBYA 2A55A 3FGRA 1OK1A 3IU3I 4A5WB 1Z92B 1TPMA 2I2LA 2LOJA 3EJHA 1ZJKA 5DN4A
chains in the Genus database with same CATH topology
2W81A 3IX0A 4LOTA 1MD7A 2YRAA 2MCYA 2MCZA 5JPMG 1NWVA 2ERJA 2UWNA 4AYEA 2CG7A 2EC3A 4YNXA 3ERBA 1E88A 1FBRA 2JRAA 1LY2A 3M7PA 2IZ4A 1Q3XA 2XRBA 2CKUA 4IGDA 4B2SA 1OJVA 1G4FA 4KKDA 3OEDC 2B5ID 4AYMA 2RLQA 4LOSA 3T5OA 1HFIA 1CKLA 3L89M 2G7IA 5HZPB 1U5MA 4DJZA 2XWJI 2XRDA 1GHQB 1OK2A 2CG6A 1VVCA 4FXGG 3KZJA 3MQLA 4B2RA 2IZ3A 4AYIA 3OP8A 2RLPA 4ZH1D 1HCCA 2KRIA 1OK9A 2BZMA 3O8EB 3KXVA 1SRZA 3GXEA 1ELVA 1G4GA 2W80A 3ZD2A 1UOTP 2WIIC 3RJ3D 4ONTD 3NFPI 4JHSA 3R62A 4K12A 1GKNA 1C1ZA 1O9AA 4C16A 5HYPA 3INBC 4J38B 5FO8C 5I0QB 1QO6A 2EHFA 2RL0A 1OK3A 3SW0X 4AYDA 1TPGA 2JGWA 1HFHA 3GOVA 4PZ5A 2QY0A 1MD8A 3TVJA 2KMSA 1E8BA 1H2PP 1H04P 1SS2A 1GPZA 4F4OC 1VVDA 5HYUB 2V8EA 5HYTB 2O39C 2JGXA 1QUBA 1GKGA 4CSYA 2XQWC 1OJYA 1H2QP 2RKYA 4MUCA 2RKZA 1H03P 3ZD1A 1PPQA 3ZRZA 4WJG2 1TPNA 2XWBF 1QGBA 3CALA 3OXUD 1OJWA 1E5GA 2YBYA 2A55A 1OK1A 3IU3I 4A5WB 1Z92B 1TPMA 2LOJA 3EJHA 1ZJKA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2W81 A;  3IX0 A;  4LOT A;  1MD7 A;  2YRA A;  2MCY A;  2MCZ A;  5JPM G;  1NWV A;  2ERJ A;  2UWN A;  4AYE A;  2CG7 A;  2EC3 A;  4YNX A;  3ERB A;  1E88 A;  1FBR A;  2JRA A;  1LY2 A;  3M7P A;  2IZ4 A;  1Q3X A;  2XRB A;  2CKU A;  4IGD A;  4B2S A;  1OJV A;  1G4F A;  4KKD A;  3OED C;  2B5I D;  4AYM A;  2RLQ A;  4LOS A;  3T5O A;  1HFI A;  1CKL A;  3L89 M;  2G7I A;  5HZP B;  1U5M A;  4DJZ A;  2XWJ I;  2XRD A;  1GHQ B;  1OK2 A;  2CG6 A;  1VVC A;  4FXG G;  3KZJ A;  3MQL A;  4B2R A;  2IZ3 A;  4AYI A;  3OP8 A;  2RLP A;  4ZH1 D;  1HCC A;  2KRI A;  1OK9 A;  2BZM A;  3O8E B;  3KXV A;  1SRZ A;  3GXE A;  1ELV A;  1G4G A;  2W80 A;  3ZD2 A;  1UOT P;  2WII C;  3RJ3 D;  4ONT D;  3NFP I;  4JHS A;  3R62 A;  4K12 A;  1GKN A;  1C1Z A;  1O9A A;  4C16 A;  5HYP A;  3INB C;  4J38 B;  5FO8 C;  5I0Q B;  1QO6 A;  2EHF A;  2RL0 A;  1OK3 A;  3SW0 X;  4AYD A;  1TPG A;  2JGW A;  1HFH A;  3GOV A;  4PZ5 A;  2QY0 A;  1MD8 A;  3TVJ A;  2KMS A;  1E8B A;  1H2P P;  1H04 P;  1SS2 A;  1GPZ A;  4F4O C;  1VVD A;  5HYU B;  2V8E A;  5HYT B;  2O39 C;  2JGX A;  1QUB A;  1GKG A;  4CSY A;  2XQW C;  1OJY A;  1H2Q P;  2RKY A;  4MUC A;  2RKZ A;  1H03 P;  3ZD1 A;  1PPQ A;  3ZRZ A;  4WJG 2;  1TPN A;  2XWB F;  1QGB A;  3CAL A;  3OXU D;  1OJW A;  1E5G A;  2YBY A;  2A55 A;  1OK1 A;  3IU3 I;  4A5W B;  1Z92 B;  1TPM A;  2LOJ A;  3EJH A;  1ZJK A; 
#chains in the Genus database with same CATH topology
 2W81 A;  3FGT A;  3IX0 A;  4LOT A;  1MD7 A;  2YRA A;  2MCY A;  2MCZ A;  5JPM G;  1NWV A;  2ERJ A;  2UWN A;  4AYE A;  2CG7 A;  2EC3 A;  4YNX A;  3ERB A;  1E88 A;  1FBR A;  4MSL A;  2JRA A;  1LY2 A;  3M7P A;  3K3T A;  2IZ4 A;  1Q3X A;  2XRB A;  2CKU A;  4IGD A;  2Y8T A;  4B2S A;  1OJV A;  1G4F A;  4KKD A;  3OED C;  2B5I D;  4APL A;  4AYM A;  2RLQ A;  4LOS A;  3T5O A;  1HFI A;  1CKL A;  3L89 M;  2G7I A;  5HZP B;  4YIZ A;  1U5M A;  4DJZ A;  2XWJ I;  5DN5 A;  2XRD A;  1GHQ B;  2ZYC A;  1OK2 A;  2CG6 A;  1VVC A;  4FXG G;  3KZJ A;  3MQL A;  4B2R A;  2IZ3 A;  3NJA A;  4AYI A;  3OP8 A;  2RLP A;  4ZH1 D;  3VWO A;  1HCC A;  2KRI A;  1OK9 A;  2BZM A;  3WSX A;  4N7E A;  3O8E B;  3KXV A;  1SRZ A;  3GXE A;  1ELV A;  1G4G A;  2W80 A;  3ZD2 A;  1UOT P;  2WII C;  3RJ3 D;  3WSY A;  4ONT D;  3NFP I;  4JHS A;  3R62 A;  4K12 A;  1GKN A;  1C1Z A;  1O9A A;  4C16 A;  5HYP A;  3INB C;  4J38 B;  3ZLE A;  5FO8 C;  5I0Q B;  1QO6 A;  2EHF A;  2RL0 A;  1OK3 A;  3SW0 X;  4AYD A;  1TPG A;  2JGW A;  4BWC A;  1HFH A;  3ZLD A;  3GOV A;  2Y8R A;  4PZ5 A;  2QY0 A;  1MD8 A;  3TVJ A;  2KMS A;  2Y8S A;  1E8B A;  1H2P P;  1H04 P;  1SS2 A;  1GPZ A;  4F4O C;  1VVD A;  5HYU B;  2V8E A;  5HYT B;  2O39 C;  2JGX A;  1QUB A;  1GKG A;  4CSY A;  2XQW C;  1OJY A;  1H2Q P;  2RKY A;  4MUC A;  2RKZ A;  3F6K A;  1H03 P;  3ZD1 A;  1PPQ A;  3ZRZ A;  4PO7 A;  2X2Z A;  1TPN A;  2XWB F;  1QGB A;  3CAL A;  3OXU D;  1OJW A;  4WJG 2;  1E5G A;  1RLH A;  3CI0 J;  2YBY A;  2A55 A;  3FGR A;  1OK1 A;  3IU3 I;  4A5W B;  1Z92 B;  1TPM A;  2I2L A;  2LOJ A;  3EJH A;  1ZJK A;  5DN4 A; 
#chains in the Genus database with same CATH homology
 2W81 A;  3IX0 A;  4LOT A;  1MD7 A;  2YRA A;  2MCY A;  2MCZ A;  5JPM G;  1NWV A;  2ERJ A;  2UWN A;  4AYE A;  2CG7 A;  2EC3 A;  4YNX A;  3ERB A;  1E88 A;  1FBR A;  2JRA A;  1LY2 A;  3M7P A;  2IZ4 A;  1Q3X A;  2XRB A;  2CKU A;  4IGD A;  4B2S A;  1OJV A;  1G4F A;  4KKD A;  3OED C;  2B5I D;  4AYM A;  2RLQ A;  4LOS A;  3T5O A;  1HFI A;  1CKL A;  3L89 M;  2G7I A;  5HZP B;  1U5M A;  4DJZ A;  2XWJ I;  2XRD A;  1GHQ B;  1OK2 A;  2CG6 A;  1VVC A;  4FXG G;  3KZJ A;  3MQL A;  4B2R A;  2IZ3 A;  4AYI A;  3OP8 A;  2RLP A;  4ZH1 D;  1HCC A;  2KRI A;  1OK9 A;  2BZM A;  3O8E B;  3KXV A;  1SRZ A;  3GXE A;  1ELV A;  1G4G A;  2W80 A;  3ZD2 A;  1UOT P;  2WII C;  3RJ3 D;  4ONT D;  3NFP I;  4JHS A;  3R62 A;  4K12 A;  1GKN A;  1C1Z A;  1O9A A;  4C16 A;  5HYP A;  3INB C;  4J38 B;  5FO8 C;  5I0Q B;  1QO6 A;  2EHF A;  2RL0 A;  1OK3 A;  3SW0 X;  4AYD A;  1TPG A;  2JGW A;  1HFH A;  3GOV A;  4PZ5 A;  2QY0 A;  1MD8 A;  3TVJ A;  2KMS A;  1E8B A;  1H2P P;  1H04 P;  1SS2 A;  1GPZ A;  4F4O C;  1VVD A;  5HYU B;  2V8E A;  5HYT B;  2O39 C;  2JGX A;  1QUB A;  1GKG A;  4CSY A;  2XQW C;  1OJY A;  1H2Q P;  2RKY A;  4MUC A;  2RKZ A;  1H03 P;  3ZD1 A;  1PPQ A;  3ZRZ A;  4WJG 2;  1TPN A;  2XWB F;  1QGB A;  3CAL A;  3OXU D;  1OJW A;  1E5G A;  2YBY A;  2A55 A;  1OK1 A;  3IU3 I;  4A5W B;  1Z92 B;  1TPM A;  2LOJ A;  3EJH A;  1ZJK A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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