4B2RA

Solution structure of ccp modules 10-11 of complement factor h
Total Genus 17
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
17
sequence length
126
structure length
126
Chain Sequence
EAAGERECELPKIDVHLVPDRKKDQYKVGEVLKFSCKPGFTIVGPNSVQCYHFGLSPDLPICKEQVQSCGPPPELLNGNVKEKTKEEYGHSEVVEYYCNPRFLMKGPNKIQCVDGEWTTLPVCIVE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Immune system
molecule keywords COMPLEMENT FACTOR H
publication title Solution Structure of Ccp Modules 10-12 Illuminates Functional Architecture of the Complement Regulator, Factor H.
pubmed doi rcsb
source organism Homo sapiens
total genus 17
structure length 126
sequence length 126
ec nomenclature
pdb deposition date 2012-07-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00084 Sushi Sushi repeat (SCR repeat)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.70.10 Mainly Beta Ribbon Complement Module; domain 1 Complement Module, domain 1 4b2rA01
2.10.70.10 Mainly Beta Ribbon Complement Module; domain 1 Complement Module, domain 1 4b2rA02
2KRIA 5HYUB 1OK3A 1G4FA 3INBC 3O8EB 2UWNA 5FO8C 2A55A 1NWVA 1MD7A 2CKUA 2RLPA 4C16A 2B5ID 1E5GA 1OJYA 1TPNA 2BZMA 4B2SA 2MCZA 4J38B 4AYMA 3OP8A 1OJVA 1H2PP 2IZ3A 4AYEA 2EHFA 4B2RA 3NFPI 1HCCA 3ZD1A 4A5WB 1G4GA 4F4OC 4LOTA 3R62A 2XWJI 1GKGA 1U5MA 1H03P 1ELVA 2IZ4A 4DJZA 4IGDA 4YNXA 3KZJA 1O9AA 2JGWA 1C1ZA 1QO6A 2MCYA 3RJ3D 3GXEA 2XQWC 1OK2A 1PPQA 2YBYA 4WJG2 2RLQA 3CALA 1OJWA 2CG6A 4AYIA 4FXGG 1H2QP 1GHQB 2JGXA 4PZ5A 2W81A 1TPMA 3MQLA 3OEDC 1SRZA 1ZJKA 2EC3A 1QGBA 1VVDA 5I0QB 3EJHA 2YRAA 5HYTB 1SS2A 1Z92B 4K12A 4KKDA 5HYPA 1CKLA 3SW0X 1HFHA 1E8BA 3ERBA 3T5OA 4ONTD 2KMSA 2LOJA 2RKYA 3M7PA 1VVCA 1E88A 4AYDA 1H04P 4MUCA 2JRAA 1QUBA 3TVJA 4ZH1D 1GKNA 1LY2A 2XRDA 3OXUD 2ERJA 2RL0A 1Q3XA 3ZD2A 3IU3I 5JPMG 1OK9A 2O39C 3L89M 4CSYA 3GOVA 1TPGA 1UOTP 2XRBA 4LOSA 1GPZA 2XWBF 1FBRA 1HFIA 3ZRZA 1MD8A 2QY0A 2CG7A 2G7IA 2RKZA 2V8EA 5HZPB 2WIIC 4JHSA 2W80A 1OK1A 3IX0A 3KXVA
chains in the Genus database with same CATH superfamily
2KRIA 5HYUB 1OK3A 1G4FA 5DN5A 3INBC 3O8EB 2UWNA 5FO8C 2A55A 1NWVA 1MD7A 2CKUA 2RLPA 4C16A 2B5ID 1E5GA 1OJYA 1TPNA 2BZMA 4B2SA 2MCZA 4J38B 4AYMA 3OP8A 3ZLDA 1OJVA 1H2PP 2IZ3A 4AYEA 2EHFA 4B2RA 3NFPI 1HCCA 3ZD1A 4A5WB 1G4GA 4F4OC 4LOTA 3R62A 2XWJI 1GKGA 1U5MA 1H03P 3WSXA 1ELVA 2IZ4A 4DJZA 4IGDA 4YNXA 3KZJA 1O9AA 2JGWA 3ZLEA 1C1ZA 1QO6A 2MCYA 2Y8RA 3NJAA 3RJ3D 3GXEA 2XQWC 1OK2A 1PPQA 2YBYA 3CI0J 4WJG2 2RLQA 2ZYCA 3CALA 1OJWA 2CG6A 4AYIA 4FXGG 1H2QP 1GHQB 2JGXA 4PZ5A 2W81A 1TPMA 3MQLA 3OEDC 1SRZA 1ZJKA 2EC3A 1QGBA 1VVDA 5I0QB 3EJHA 2YRAA 3VWOA 5HYTB 1SS2A 1Z92B 4K12A 4N7EA 4KKDA 4APLA 4PO7A 5HYPA 2Y8TA 1CKLA 3SW0X 1HFHA 2I2LA 4BWCA 1E8BA 3ERBA 3T5OA 1RLHA 4ONTD 2KMSA 2LOJA 2RKYA 2Y8SA 3M7PA 1VVCA 1E88A 4AYDA 3K3TA 1H04P 4MUCA 2JRAA 4YIZA 1QUBA 3TVJA 4ZH1D 1GKNA 4MSLA 1LY2A 2XRDA 3OXUD 2ERJA 2RL0A 1Q3XA 5DN4A 3ZD2A 3IU3I 3WSYA 1OK9A 2O39C 3L89M 5JPMG 4CSYA 3GOVA 3F6KA 1TPGA 1UOTP 2XRBA 4LOSA 1GPZA 2XWBF 3FGTA 1FBRA 1HFIA 3ZRZA 1MD8A 2QY0A 2CG7A 3FGRA 2G7IA 2RKZA 2V8EA 5HZPB 2WIIC 4JHSA 2W80A 1OK1A 2X2ZA 3IX0A 3KXVA
chains in the Genus database with same CATH topology
2KRIA 5HYUB 1OK3A 1G4FA 3INBC 3O8EB 2UWNA 5FO8C 2A55A 1NWVA 1MD7A 2CKUA 2RLPA 4C16A 2B5ID 1E5GA 1OJYA 1TPNA 2BZMA 4B2SA 2MCZA 4J38B 4AYMA 3OP8A 1OJVA 1H2PP 2IZ3A 4AYEA 2EHFA 4B2RA 3NFPI 1HCCA 3ZD1A 4A5WB 1G4GA 4F4OC 4LOTA 3R62A 2XWJI 1GKGA 1U5MA 1H03P 1ELVA 2IZ4A 4DJZA 4IGDA 4YNXA 3KZJA 1O9AA 2JGWA 1C1ZA 1QO6A 2MCYA 3RJ3D 3GXEA 2XQWC 1OK2A 1PPQA 2YBYA 4WJG2 2RLQA 3CALA 1OJWA 2CG6A 4AYIA 4FXGG 1H2QP 1GHQB 2JGXA 4PZ5A 2W81A 1TPMA 3MQLA 3OEDC 1SRZA 1ZJKA 2EC3A 1QGBA 1VVDA 5I0QB 3EJHA 2YRAA 5HYTB 1SS2A 1Z92B 4K12A 4KKDA 5HYPA 1CKLA 3SW0X 1HFHA 1E8BA 3ERBA 3T5OA 4ONTD 2KMSA 2LOJA 2RKYA 3M7PA 1VVCA 1E88A 4AYDA 1H04P 4MUCA 2JRAA 1QUBA 3TVJA 4ZH1D 1GKNA 1LY2A 2XRDA 3OXUD 2ERJA 2RL0A 1Q3XA 3ZD2A 3IU3I 5JPMG 1OK9A 2O39C 3L89M 4CSYA 3GOVA 1TPGA 1UOTP 2XRBA 4LOSA 1GPZA 2XWBF 1FBRA 1HFIA 3ZRZA 1MD8A 2QY0A 2CG7A 2G7IA 2RKZA 2V8EA 5HZPB 2WIIC 4JHSA 2W80A 1OK1A 3IX0A 3KXVA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2KRI A;  5HYU B;  1OK3 A;  1G4F A;  3INB C;  3O8E B;  2UWN A;  5FO8 C;  2A55 A;  1NWV A;  1MD7 A;  2CKU A;  2RLP A;  4C16 A;  2B5I D;  1E5G A;  1OJY A;  1TPN A;  2BZM A;  4B2S A;  2MCZ A;  4J38 B;  4AYM A;  3OP8 A;  1OJV A;  1H2P P;  2IZ3 A;  4AYE A;  2EHF A;  4B2R A;  3NFP I;  1HCC A;  3ZD1 A;  4A5W B;  1G4G A;  4F4O C;  4LOT A;  3R62 A;  2XWJ I;  1GKG A;  1U5M A;  1H03 P;  1ELV A;  2IZ4 A;  4DJZ A;  4IGD A;  4YNX A;  3KZJ A;  1O9A A;  2JGW A;  1C1Z A;  1QO6 A;  2MCY A;  3RJ3 D;  3GXE A;  2XQW C;  1OK2 A;  1PPQ A;  2YBY A;  4WJG 2;  2RLQ A;  3CAL A;  1OJW A;  2CG6 A;  4AYI A;  4FXG G;  1H2Q P;  1GHQ B;  2JGX A;  4PZ5 A;  2W81 A;  1TPM A;  3MQL A;  3OED C;  1SRZ A;  1ZJK A;  2EC3 A;  1QGB A;  1VVD A;  5I0Q B;  3EJH A;  2YRA A;  5HYT B;  1SS2 A;  1Z92 B;  4K12 A;  4KKD A;  5HYP A;  1CKL A;  3SW0 X;  1HFH A;  1E8B A;  3ERB A;  3T5O A;  4ONT D;  2KMS A;  2LOJ A;  2RKY A;  3M7P A;  1VVC A;  1E88 A;  4AYD A;  1H04 P;  4MUC A;  2JRA A;  1QUB A;  3TVJ A;  4ZH1 D;  1GKN A;  1LY2 A;  2XRD A;  3OXU D;  2ERJ A;  2RL0 A;  1Q3X A;  3ZD2 A;  3IU3 I;  5JPM G;  1OK9 A;  2O39 C;  3L89 M;  4CSY A;  3GOV A;  1TPG A;  1UOT P;  2XRB A;  4LOS A;  1GPZ A;  2XWB F;  1FBR A;  1HFI A;  3ZRZ A;  1MD8 A;  2QY0 A;  2CG7 A;  2G7I A;  2RKZ A;  2V8E A;  5HZP B;  2WII C;  4JHS A;  2W80 A;  1OK1 A;  3IX0 A;  3KXV A; 
#chains in the Genus database with same CATH topology
 2KRI A;  5HYU B;  1OK3 A;  1G4F A;  5DN5 A;  3INB C;  3O8E B;  2UWN A;  5FO8 C;  2A55 A;  1NWV A;  1MD7 A;  2CKU A;  2RLP A;  4C16 A;  2B5I D;  1E5G A;  1OJY A;  1TPN A;  2BZM A;  4B2S A;  2MCZ A;  4J38 B;  4AYM A;  3OP8 A;  3ZLD A;  1OJV A;  1H2P P;  2IZ3 A;  4AYE A;  2EHF A;  4B2R A;  3NFP I;  1HCC A;  3ZD1 A;  4A5W B;  1G4G A;  4F4O C;  4LOT A;  3R62 A;  2XWJ I;  1GKG A;  1U5M A;  1H03 P;  3WSX A;  1ELV A;  2IZ4 A;  4DJZ A;  4IGD A;  4YNX A;  3KZJ A;  1O9A A;  2JGW A;  3ZLE A;  1C1Z A;  1QO6 A;  2MCY A;  2Y8R A;  3NJA A;  3RJ3 D;  3GXE A;  2XQW C;  1OK2 A;  1PPQ A;  2YBY A;  3CI0 J;  4WJG 2;  2RLQ A;  2ZYC A;  3CAL A;  1OJW A;  2CG6 A;  4AYI A;  4FXG G;  1H2Q P;  1GHQ B;  2JGX A;  4PZ5 A;  2W81 A;  1TPM A;  3MQL A;  3OED C;  1SRZ A;  1ZJK A;  2EC3 A;  1QGB A;  1VVD A;  5I0Q B;  3EJH A;  2YRA A;  3VWO A;  5HYT B;  1SS2 A;  1Z92 B;  4K12 A;  4N7E A;  4KKD A;  4APL A;  4PO7 A;  5HYP A;  2Y8T A;  1CKL A;  3SW0 X;  1HFH A;  2I2L A;  4BWC A;  1E8B A;  3ERB A;  3T5O A;  1RLH A;  4ONT D;  2KMS A;  2LOJ A;  2RKY A;  2Y8S A;  3M7P A;  1VVC A;  1E88 A;  4AYD A;  3K3T A;  1H04 P;  4MUC A;  2JRA A;  4YIZ A;  1QUB A;  3TVJ A;  4ZH1 D;  1GKN A;  4MSL A;  1LY2 A;  2XRD A;  3OXU D;  2ERJ A;  2RL0 A;  1Q3X A;  5DN4 A;  3ZD2 A;  3IU3 I;  3WSY A;  1OK9 A;  2O39 C;  3L89 M;  5JPM G;  4CSY A;  3GOV A;  3F6K A;  1TPG A;  1UOT P;  2XRB A;  4LOS A;  1GPZ A;  2XWB F;  3FGT A;  1FBR A;  1HFI A;  3ZRZ A;  1MD8 A;  2QY0 A;  2CG7 A;  3FGR A;  2G7I A;  2RKZ A;  2V8E A;  5HZP B;  2WII C;  4JHS A;  2W80 A;  1OK1 A;  2X2Z A;  3IX0 A;  3KXV A; 
#chains in the Genus database with same CATH homology
 2KRI A;  5HYU B;  1OK3 A;  1G4F A;  3INB C;  3O8E B;  2UWN A;  5FO8 C;  2A55 A;  1NWV A;  1MD7 A;  2CKU A;  2RLP A;  4C16 A;  2B5I D;  1E5G A;  1OJY A;  1TPN A;  2BZM A;  4B2S A;  2MCZ A;  4J38 B;  4AYM A;  3OP8 A;  1OJV A;  1H2P P;  2IZ3 A;  4AYE A;  2EHF A;  4B2R A;  3NFP I;  1HCC A;  3ZD1 A;  4A5W B;  1G4G A;  4F4O C;  4LOT A;  3R62 A;  2XWJ I;  1GKG A;  1U5M A;  1H03 P;  1ELV A;  2IZ4 A;  4DJZ A;  4IGD A;  4YNX A;  3KZJ A;  1O9A A;  2JGW A;  1C1Z A;  1QO6 A;  2MCY A;  3RJ3 D;  3GXE A;  2XQW C;  1OK2 A;  1PPQ A;  2YBY A;  4WJG 2;  2RLQ A;  3CAL A;  1OJW A;  2CG6 A;  4AYI A;  4FXG G;  1H2Q P;  1GHQ B;  2JGX A;  4PZ5 A;  2W81 A;  1TPM A;  3MQL A;  3OED C;  1SRZ A;  1ZJK A;  2EC3 A;  1QGB A;  1VVD A;  5I0Q B;  3EJH A;  2YRA A;  5HYT B;  1SS2 A;  1Z92 B;  4K12 A;  4KKD A;  5HYP A;  1CKL A;  3SW0 X;  1HFH A;  1E8B A;  3ERB A;  3T5O A;  4ONT D;  2KMS A;  2LOJ A;  2RKY A;  3M7P A;  1VVC A;  1E88 A;  4AYD A;  1H04 P;  4MUC A;  2JRA A;  1QUB A;  3TVJ A;  4ZH1 D;  1GKN A;  1LY2 A;  2XRD A;  3OXU D;  2ERJ A;  2RL0 A;  1Q3X A;  3ZD2 A;  3IU3 I;  5JPM G;  1OK9 A;  2O39 C;  3L89 M;  4CSY A;  3GOV A;  1TPG A;  1UOT P;  2XRB A;  4LOS A;  1GPZ A;  2XWB F;  1FBR A;  1HFI A;  3ZRZ A;  1MD8 A;  2QY0 A;  2CG7 A;  2G7I A;  2RKZ A;  2V8E A;  5HZP B;  2WII C;  4JHS A;  2W80 A;  1OK1 A;  3IX0 A;  3KXV A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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