4BQDA

Kd1 of human tfpi in complex with a synthetic peptide
Total Genus 13
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
13
sequence length
78
structure length
78
Chain Sequence
SEEDEEHTIITDTELPPLKLMHSFCAFKADDGPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMCTRD
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Blood clotting
molecule keywords TISSUE FACTOR PATHWAY INHIBITOR (LIPOPROTEIN-ASSOCIATED COAG
publication title Small Peptides Blocking Inhibition of Factor Xa and Tissue Factor-Factor Viia by Tissue Factor Pathway Inhibitor (Tfpi)
pubmed doi rcsb
total genus 13
structure length 78
sequence length 78
chains with identical sequence B
ec nomenclature
pdb deposition date 2013-05-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00014 Kunitz_BPTI Kunitz/Bovine pancreatic trypsin inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
4.10.410.10 Few Secondary Structures Irregular Factor Xa Inhibitor Pancreatic trypsin inhibitor Kunitz domain 4bqdA00
1P2NB 1BTHP 1OA55 1D0DA 4DG4C 1BRCI 1ZR0B 1P2QB 2DDIA 1TOCR 4ISLB 3U1JE 3L33E 1KTHA 2FI4I 2W8XA 3UIRC 2HEXA 3AUEA 1YKTB 2JOTA 4Y11I 3LDMA 1KIGI 2IJOI 3UOUB 1BPIA 1FY8I 3L3TE 1DEMA 3BTFI 3BTDI 6PTIA 1UUBA 4BD9B 1F5RI 1LD6A 4PTIA 4Y10I 1LD5A 1EJMB 1OA65 2J6DA 2R9PE 2TGPI 3WNYA 3BTQI 1NAGA 4Y0ZI 1P2KI 3FP7J 1P2OB 1QLQA 1FAKI 3AUCA 1T8NB 1JC6A 7PTIA 2FI5I 1CO7I 3AUHA 3BTMI 3OFWA 1BIKA 4NTYB 3BTTI 1TFXC 5C67C 3M7QB 1BUNB 2DDJA 1KUNA 2ODYE 1ADZA 1SHPA 3BTEI 3BTGI 3AUDA 5JB5A 3LDIA 1T8OB 2FTMB 4WWYC 1KNTA 2M01A 1BPTA 1JV8A 1D0DB 3BTWI 1IRHA 3TGJI 9PTIA 2ZVXA 2KCRA 1JV9A 1YLCB 1BRBI 1BZ5A 1P2JI 2FI3I 3OTJI 1DTKA 3P92E 4Y0YI 1T7CB 1MTND 5JB7A 1P2II 4U30W 1TAPA 3FP6I 4NTWB 1UUAA 1EAWB 1YLDB 4BQDA 1G6XA 3TGKI 4WXVC 3TGII 8PTIA 3TPII 3AUGA 4ISNB 4DTGK 2FTLI 2M99A 1AAPA 1CBWD 2LFLA 2PTCI 1Y62A 1BHCA 1B0CA 1PITA 2KNTA 3BYBA 1CA0D 2ZJXA 1P2MB 3GYMI 4TPII 1BF0A 1TPAI 1TAWB 5JB4A 1DENA 3AUBA 3D65I 1TCPA 2CA7A 2LFKA 3FP8I 3LDJA 3AUIA 3BTHI 1K6UA 5JB6A 1BZXI 4ISOB 1F7ZI 2TPII 1DTXA 2RA3C 2UUYB 1T8LB 2KAII 3BTKI 1ZJDB 3CI7A 1FANA 4NTXB 4U32X 5PTIA 3T62D 1T8MB 1AALA 4BNRI 1YC0I 2UUXA 3P95E 1BTIA
chains in the Genus database with same CATH superfamily
1P2NB 1BTHP 1OA55 1D0DA 4DG4C 1BRCI 1ZR0B 1P2QB 2DDIA 1TOCR 4ISLB 3U1JE 3L33E 1KTHA 2FI4I 2W8XA 3UIRC 2HEXA 3AUEA 1YKTB 2JOTA 4Y11I 3LDMA 1KIGI 2IJOI 3UOUB 1BPIA 1FY8I 3L3TE 1DEMA 3BTFI 3BTDI 6PTIA 1UUBA 4BD9B 1F5RI 1LD6A 4PTIA 4Y10I 1LD5A 1EJMB 1OA65 2J6DA 2R9PE 2TGPI 3WNYA 3BTQI 1NAGA 4Y0ZI 1P2KI 3FP7J 1P2OB 1QLQA 1FAKI 3AUCA 1T8NB 1JC6A 7PTIA 2FI5I 1CO7I 3AUHA 3BTMI 3OFWA 1BIKA 4NTYB 3BTTI 1TFXC 5C67C 3M7QB 1BUNB 2DDJA 1KUNA 2ODYE 1ADZA 1SHPA 3BTEI 3BTGI 3AUDA 5JB5A 3LDIA 1T8OB 2FTMB 4WWYC 1KNTA 2M01A 1BPTA 1JV8A 1D0DB 3BTWI 1IRHA 3TGJI 9PTIA 2ZVXA 2KCRA 1JV9A 1YLCB 1BRBI 1BZ5A 1P2JI 2FI3I 3OTJI 1DTKA 3P92E 4Y0YI 1T7CB 1MTND 5JB7A 1P2II 4U30W 1TAPA 3FP6I 4NTWB 1UUAA 1EAWB 1YLDB 4BQDA 1G6XA 3TGKI 4WXVC 3TGII 8PTIA 3TPII 3AUGA 4ISNB 4DTGK 2FTLI 2M99A 1AAPA 1CBWD 2LFLA 2PTCI 1Y62A 1BHCA 1B0CA 1PITA 2KNTA 3BYBA 1CA0D 2ZJXA 1P2MB 3GYMI 4TPII 1BF0A 1TPAI 1TAWB 5JB4A 1DENA 3AUBA 3D65I 1TCPA 2CA7A 2LFKA 3FP8I 3LDJA 3AUIA 3BTHI 1K6UA 5JB6A 1BZXI 4ISOB 1F7ZI 2TPII 1DTXA 2RA3C 2UUYB 1T8LB 2KAII 3BTKI 1ZJDB 3CI7A 1FANA 4NTXB 4U32X 5PTIA 3T62D 1T8MB 1AALA 4BNRI 1YC0I 2UUXA 3P95E 1BTIA
chains in the Genus database with same CATH topology
1P2NB 1BTHP 1OA55 1D0DA 4DG4C 1BRCI 1ZR0B 1P2QB 2DDIA 1TOCR 4ISLB 3U1JE 3L33E 1KTHA 2FI4I 2W8XA 3UIRC 2HEXA 3AUEA 1YKTB 2JOTA 4Y11I 3LDMA 1KIGI 2IJOI 3UOUB 1BPIA 1FY8I 3L3TE 1DEMA 3BTFI 3BTDI 6PTIA 1UUBA 4BD9B 1F5RI 1LD6A 4PTIA 4Y10I 1LD5A 1EJMB 1OA65 2J6DA 2R9PE 2TGPI 3WNYA 3BTQI 1NAGA 4Y0ZI 1P2KI 3FP7J 1P2OB 1QLQA 1FAKI 3AUCA 1T8NB 1JC6A 7PTIA 2FI5I 1CO7I 3AUHA 3BTMI 3OFWA 1BIKA 4NTYB 3BTTI 1TFXC 5C67C 3M7QB 1BUNB 2DDJA 1KUNA 2ODYE 1ADZA 1SHPA 3BTEI 3BTGI 3AUDA 5JB5A 3LDIA 1T8OB 2FTMB 4WWYC 1KNTA 2M01A 1BPTA 1JV8A 1D0DB 3BTWI 1IRHA 3TGJI 9PTIA 2ZVXA 2KCRA 1JV9A 1YLCB 1BRBI 1BZ5A 1P2JI 2FI3I 3OTJI 1DTKA 3P92E 4Y0YI 1T7CB 1MTND 5JB7A 1P2II 4U30W 1TAPA 3FP6I 4NTWB 1UUAA 1EAWB 1YLDB 4BQDA 1G6XA 3TGKI 4WXVC 3TGII 8PTIA 3TPII 3AUGA 4ISNB 4DTGK 2FTLI 2M99A 1AAPA 1CBWD 2LFLA 2PTCI 1Y62A 1BHCA 1B0CA 1PITA 2KNTA 3BYBA 1CA0D 2ZJXA 1P2MB 3GYMI 4TPII 1BF0A 1TPAI 1TAWB 5JB4A 1DENA 3AUBA 3D65I 1TCPA 2CA7A 2LFKA 3FP8I 3LDJA 3AUIA 3BTHI 1K6UA 5JB6A 1BZXI 4ISOB 1F7ZI 2TPII 1DTXA 2RA3C 2UUYB 1T8LB 2KAII 3BTKI 1ZJDB 3CI7A 1FANA 4NTXB 4U32X 5PTIA 3T62D 1T8MB 1AALA 4BNRI 1YC0I 2UUXA 3P95E 1BTIA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1P2N B;  1BTH P;  1OA5 5;  1D0D A;  4DG4 C;  1BRC I;  1ZR0 B;  1P2Q B;  2DDI A;  1TOC R;  4ISL B;  3U1J E;  3L33 E;  1KTH A;  2FI4 I;  2W8X A;  3UIR C;  2HEX A;  3AUE A;  1YKT B;  2JOT A;  4Y11 I;  3LDM A;  1KIG I;  2IJO I;  3UOU B;  1BPI A;  1FY8 I;  3L3T E;  1DEM A;  3BTF I;  3BTD I;  6PTI A;  1UUB A;  4BD9 B;  1F5R I;  1LD6 A;  4PTI A;  4Y10 I;  1LD5 A;  1EJM B;  1OA6 5;  2J6D A;  2R9P E;  2TGP I;  3WNY A;  3BTQ I;  1NAG A;  4Y0Z I;  1P2K I;  3FP7 J;  1P2O B;  1QLQ A;  1FAK I;  3AUC A;  1T8N B;  1JC6 A;  7PTI A;  2FI5 I;  1CO7 I;  3AUH A;  3BTM I;  3OFW A;  1BIK A;  4NTY B;  3BTT I;  1TFX C;  5C67 C;  3M7Q B;  1BUN B;  2DDJ A;  1KUN A;  2ODY E;  1ADZ A;  1SHP A;  3BTE I;  3BTG I;  3AUD A;  5JB5 A;  3LDI A;  1T8O B;  2FTM B;  4WWY C;  1KNT A;  2M01 A;  1BPT A;  1JV8 A;  1D0D B;  3BTW I;  1IRH A;  3TGJ I;  9PTI A;  2ZVX A;  2KCR A;  1JV9 A;  1YLC B;  1BRB I;  1BZ5 A;  1P2J I;  2FI3 I;  3OTJ I;  1DTK A;  3P92 E;  4Y0Y I;  1T7C B;  1MTN D;  5JB7 A;  1P2I I;  4U30 W;  1TAP A;  3FP6 I;  4NTW B;  1UUA A;  1EAW B;  1YLD B;  4BQD A;  1G6X A;  3TGK I;  4WXV C;  3TGI I;  8PTI A;  3TPI I;  3AUG A;  4ISN B;  4DTG K;  2FTL I;  2M99 A;  1AAP A;  1CBW D;  2LFL A;  2PTC I;  1Y62 A;  1BHC A;  1B0C A;  1PIT A;  2KNT A;  3BYB A;  1CA0 D;  2ZJX A;  1P2M B;  3GYM I;  4TPI I;  1BF0 A;  1TPA I;  1TAW B;  5JB4 A;  1DEN A;  3AUB A;  3D65 I;  1TCP A;  2CA7 A;  2LFK A;  3FP8 I;  3LDJ A;  3AUI A;  3BTH I;  1K6U A;  5JB6 A;  1BZX I;  4ISO B;  1F7Z I;  2TPI I;  1DTX A;  2RA3 C;  2UUY B;  1T8L B;  2KAI I;  3BTK I;  1ZJD B;  3CI7 A;  1FAN A;  4NTX B;  4U32 X;  5PTI A;  3T62 D;  1T8M B;  1AAL A;  4BNR I;  1YC0 I;  2UUX A;  3P95 E;  1BTI A; 
#chains in the Genus database with same CATH topology
 1P2N B;  1BTH P;  1OA5 5;  1D0D A;  4DG4 C;  1BRC I;  1ZR0 B;  1P2Q B;  2DDI A;  1TOC R;  4ISL B;  3U1J E;  3L33 E;  1KTH A;  2FI4 I;  2W8X A;  3UIR C;  2HEX A;  3AUE A;  1YKT B;  2JOT A;  4Y11 I;  3LDM A;  1KIG I;  2IJO I;  3UOU B;  1BPI A;  1FY8 I;  3L3T E;  1DEM A;  3BTF I;  3BTD I;  6PTI A;  1UUB A;  4BD9 B;  1F5R I;  1LD6 A;  4PTI A;  4Y10 I;  1LD5 A;  1EJM B;  1OA6 5;  2J6D A;  2R9P E;  2TGP I;  3WNY A;  3BTQ I;  1NAG A;  4Y0Z I;  1P2K I;  3FP7 J;  1P2O B;  1QLQ A;  1FAK I;  3AUC A;  1T8N B;  1JC6 A;  7PTI A;  2FI5 I;  1CO7 I;  3AUH A;  3BTM I;  3OFW A;  1BIK A;  4NTY B;  3BTT I;  1TFX C;  5C67 C;  3M7Q B;  1BUN B;  2DDJ A;  1KUN A;  2ODY E;  1ADZ A;  1SHP A;  3BTE I;  3BTG I;  3AUD A;  5JB5 A;  3LDI A;  1T8O B;  2FTM B;  4WWY C;  1KNT A;  2M01 A;  1BPT A;  1JV8 A;  1D0D B;  3BTW I;  1IRH A;  3TGJ I;  9PTI A;  2ZVX A;  2KCR A;  1JV9 A;  1YLC B;  1BRB I;  1BZ5 A;  1P2J I;  2FI3 I;  3OTJ I;  1DTK A;  3P92 E;  4Y0Y I;  1T7C B;  1MTN D;  5JB7 A;  1P2I I;  4U30 W;  1TAP A;  3FP6 I;  4NTW B;  1UUA A;  1EAW B;  1YLD B;  4BQD A;  1G6X A;  3TGK I;  4WXV C;  3TGI I;  8PTI A;  3TPI I;  3AUG A;  4ISN B;  4DTG K;  2FTL I;  2M99 A;  1AAP A;  1CBW D;  2LFL A;  2PTC I;  1Y62 A;  1BHC A;  1B0C A;  1PIT A;  2KNT A;  3BYB A;  1CA0 D;  2ZJX A;  1P2M B;  3GYM I;  4TPI I;  1BF0 A;  1TPA I;  1TAW B;  5JB4 A;  1DEN A;  3AUB A;  3D65 I;  1TCP A;  2CA7 A;  2LFK A;  3FP8 I;  3LDJ A;  3AUI A;  3BTH I;  1K6U A;  5JB6 A;  1BZX I;  4ISO B;  1F7Z I;  2TPI I;  1DTX A;  2RA3 C;  2UUY B;  1T8L B;  2KAI I;  3BTK I;  1ZJD B;  3CI7 A;  1FAN A;  4NTX B;  4U32 X;  5PTI A;  3T62 D;  1T8M B;  1AAL A;  4BNR I;  1YC0 I;  2UUX A;  3P95 E;  1BTI A; 
#chains in the Genus database with same CATH homology
 1P2N B;  1BTH P;  1OA5 5;  1D0D A;  4DG4 C;  1BRC I;  1ZR0 B;  1P2Q B;  2DDI A;  1TOC R;  4ISL B;  3U1J E;  3L33 E;  1KTH A;  2FI4 I;  2W8X A;  3UIR C;  2HEX A;  3AUE A;  1YKT B;  2JOT A;  4Y11 I;  3LDM A;  1KIG I;  2IJO I;  3UOU B;  1BPI A;  1FY8 I;  3L3T E;  1DEM A;  3BTF I;  3BTD I;  6PTI A;  1UUB A;  4BD9 B;  1F5R I;  1LD6 A;  4PTI A;  4Y10 I;  1LD5 A;  1EJM B;  1OA6 5;  2J6D A;  2R9P E;  2TGP I;  3WNY A;  3BTQ I;  1NAG A;  4Y0Z I;  1P2K I;  3FP7 J;  1P2O B;  1QLQ A;  1FAK I;  3AUC A;  1T8N B;  1JC6 A;  7PTI A;  2FI5 I;  1CO7 I;  3AUH A;  3BTM I;  3OFW A;  1BIK A;  4NTY B;  3BTT I;  1TFX C;  5C67 C;  3M7Q B;  1BUN B;  2DDJ A;  1KUN A;  2ODY E;  1ADZ A;  1SHP A;  3BTE I;  3BTG I;  3AUD A;  5JB5 A;  3LDI A;  1T8O B;  2FTM B;  4WWY C;  1KNT A;  2M01 A;  1BPT A;  1JV8 A;  1D0D B;  3BTW I;  1IRH A;  3TGJ I;  9PTI A;  2ZVX A;  2KCR A;  1JV9 A;  1YLC B;  1BRB I;  1BZ5 A;  1P2J I;  2FI3 I;  3OTJ I;  1DTK A;  3P92 E;  4Y0Y I;  1T7C B;  1MTN D;  5JB7 A;  1P2I I;  4U30 W;  1TAP A;  3FP6 I;  4NTW B;  1UUA A;  1EAW B;  1YLD B;  4BQD A;  1G6X A;  3TGK I;  4WXV C;  3TGI I;  8PTI A;  3TPI I;  3AUG A;  4ISN B;  4DTG K;  2FTL I;  2M99 A;  1AAP A;  1CBW D;  2LFL A;  2PTC I;  1Y62 A;  1BHC A;  1B0C A;  1PIT A;  2KNT A;  3BYB A;  1CA0 D;  2ZJX A;  1P2M B;  3GYM I;  4TPI I;  1BF0 A;  1TPA I;  1TAW B;  5JB4 A;  1DEN A;  3AUB A;  3D65 I;  1TCP A;  2CA7 A;  2LFK A;  3FP8 I;  3LDJ A;  3AUI A;  3BTH I;  1K6U A;  5JB6 A;  1BZX I;  4ISO B;  1F7Z I;  2TPI I;  1DTX A;  2RA3 C;  2UUY B;  1T8L B;  2KAI I;  3BTK I;  1ZJD B;  3CI7 A;  1FAN A;  4NTX B;  4U32 X;  5PTI A;  3T62 D;  1T8M B;  1AAL A;  4BNR I;  1YC0 I;  2UUX A;  3P95 E;  1BTI A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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