4CA3A

Solution structure of streptomyces virginiae vira acp5b
Total Genus 23
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
23
sequence length
88
structure length
88
Chain Sequence
GPGSAVAVDPAPVARALREELARTLYCEPGDIDDEASFNTLGLDSILGVEFVAFVNQTYGLDEKAGILYDHPSLAALSRHVAGRAAPV
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Ribosomal protein
molecule keywords HYBRID POLYKETIDE SYNTHASE-NON RIBOSOMAL PEPTIDE SYNTHETASE
publication title Insights Into the Function of Trans-Acyl Transferase Polyketide Synthases from the Saxs Structure of a Complete Module.
doi rcsb
source organism Streptomyces virginiae
total genus 23
structure length 88
sequence length 88
ec nomenclature
pdb deposition date 2013-10-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 4ca3A01
1X3OA 2CNRA 4CA3A 2MR8A 2KR5A 1L0HA 3RG2A 2N5IA 5KP7B 1T8KA 2ROQA 2FVAA 2VSQA 1ACPA 1KLPA 2LTEA 1DNYA 4MRTC 2FQ0A 2KOPA 3CE7A 4DG9A 2CQ8A 2MR7A 2GDYA 2AVAA 2K94A 1AF8A 2LKIA 2KW2A 4H2YC 4H2XC 2MVVA 2LL8A 2XZ0D 1L0IA 2AF8A 2LOLA 2K92A 2N98A 2MF4A 4PXHB 4PWVB 2N6ZA 2LIUA 1HY8A 2L0QA 2KOQA 2N5HA 2GDWA 2X2BA 1NQ4A 2JQ4A 2L9FA 2K0YA 2KOSA 2CGQA 3GZMA 2AFEA 2MVUA 2K0XA 2EHTA 1OR5A 2K93A 3LMOA 1HQBA 2FHSC 2PNGA 3EJEA 5HV8A 4BPHA 2N6YA 4IZ6A 5KP8B 2M5RA 2QNWA 2MY5A 1DV5A 2CG5B 4BPFA 2LMLA 3EJDA 2LPKA 4R0MA 2FAEA 2L4BA 3GZLA 2KGAA 2AFDA 4BPGA 5CZDB 2KORA 5KP6B 3EJBA 2KOOA 2JU2A 4H2WC 2L22A 2FACA 2K2QA 2FVEA 5HVCA 2KG9A 2KGCA 5EJDA 2DNWA 2KGDA 2KG8A 4NEOA 2JGPA 2EHSA 2XZ1C 2N50A 2KWLA 2FVFA 4HKGA 2LIWA 2FQ2A 2KG6A 1VKUA 1F80D 2JU1A 2KGEA 3NY7B 2FADA 2FQ1A 2GDXA 2MD9A
chains in the Genus database with same CATH superfamily
1S72P 3G21A 2CNRA 1KD1Q 1BAJA 2BHVA 2VSQA 2EFJA 3Q20A 1NJIQ 2KOPA 2CQ8A 3RG6C 3DPHA 2GDYA 3HZQA 1AF8A 3G28A 1QVGO 1YIJP 2EG5A 1UNKA 2K92A 4QKOA 4PXHB 1KQSO 2LIUA 2PY8A 1Q82Q 1M74A 1NQ4A 2JQ4A 2CGQA 2P9XA 2K0XA 2M8LA 2VLPA 4F37A 4QNBA 4COPA 3P05A 3LMOA 1HQBA 2N6YA 3H4EA 7CEIA 5KP8B 1YJWP 1K30A 2QNWA 2MY5A 1RO0A 2LMLA 4R0MA 2L4BA 1EMVA 1KC8Q 3EJBA 2JU2A 2FACA 2K2QA 2FVEA 2KG9A 1FR2A 2KGCA 3CCLP 2Z46A 2JGPA 4XFZA 1VQNP 1W2BO 1IMQA 3B4QA 4GR6A 1EOQA 4IPYA 3CC4P 2BUOA 1YI2P 4GR2A 1BXIA 2CWOA 3WBHA 1MZ8A 4U0BA 3RG2A 1VQKP 3CMEP 2N5IA 2JAZA 5KP7B 1T8KA 1DNYA 4MRTC 3OW2O 1A43A 1IMPA 2LKIA 5JPAA 2GYKA 2KODA 2DGYA 3CXCO 1HY8A 3I56P 1ZMBA 1VQLP 2JBGA 2L9FA 5DCKA 3GZMA 2AFEA 2MVUA 1M6NA 3LRYA 5BS2A 4WYMA 1RNIA 3M1MA 4M0IA 1YITP 1CEIA 4U0DA 5HGMA 2M5RA 1DV5A 4XROA 4BPFA 2LPKA 3G4SP 2PEJA 2LF4A 5CZDB 1VQ6P 1GXHA 2KORA 3DS0A 2GZGA 2KOOA 3CC7P 2L22A 4COCA 5HVCA 3G29A 3CCQP 3G0VA 5EJDA 3G71P 2DNWA 3CCRP 4UHPB 1A8OA 2PENA 2M8NA 3CCVP 2KG6A 3G1IA 1VQPP 4XFYA 2KGEA 2PEKA 1E0HA 1D1DA 1GXGA 1M90Q 2GDXA 2MD9A 2XV6A 1IUQA 1E6JP 3G6EP 2K5XA 2L6EA 1QVFO 2FVAA 2LTEA 2FQ0A 3CE7A 4DG9A 1Q81Q 2PEIA 3GKLC 2MR7A 2Z45A 2AVAA 3HYBA 2XXMA 3CCUP 2KW2A 4H2YC 2QEXP 1VQ7P 3H47A 2LL8A 2XZ0D 2E1MA 2JB0A 2MF4A 4PWVB 3DS4A 3H0DA 2GZEA 2KOQA 2N5HA 2GDWA 5BS1A 2X2BA 2PEOA 3DS5A 2EHTA 1Q86Q 2GZIA 2PEQA 2FHSC 2PNGA 2EIAA 4IZ6A 2FAEA 3CCMP 1YHQP 3B5IA 3CPWO 5KP6B 4H2WC 3CMAP 1JJ2O 1K9MQ 5F2KA 1GPJA 2KG8A 2VLQA 4NEOA 3CD6P 4U0AA 2EHSA 2XZ1C 2LIWA 2FQ2A 1VKUA 1F80D 1RO2A 5F2OA 2OARA 2VLNA 2Z44A 3DS2A 3E2DA 3MGEA 1X3OA 2ONTA 4CA3A 2MR8A 5I4TG 2KR5A 1L0HA 2ROQA 1ACPA 1KLPA 2ERHA 3DTJA 5HGOA 1N8RQ 1AYIA 1ZNVA 4U0FA 2M8PA 2K94A 2JYGA 3DS1A 4H2XC 1VQ8P 1K73Q 2MVVA 2NO8A 2K0DX 1L0IA 2AF8A 2LOLA 1EIAA 2N98A 2JO0A 2N6ZA 1Z6MA 2XT1A 2L0QA 5F2NA 1M6EX 5HGNA 4U0CA 2K0YA 2KOSA 1VQ5P 1K8AQ 2PEMA 2OTJP 2GZFA 1OR5A 1UJZA 2K93A 2JYLA 1Q7YQ 3EJEA 5HV8A 3U43A 4BPHA 4PH1A 2OTLP 1VHNA 1VQ4P 3CC2P 1VQMP 3G1GA 2CG5B 1VQOP 4XRQA 3EJDA 3GZLA 2KGAA 2VLOA 2AFDA 4BPGA 4U0EA 4XFXA 5HGLA 3CCJP 1QRJA 1AUMA 1M1KQ 3I55P 3DS3A 1YJ9P 2GZJA 3NTEA 2KGDA 4PH0A 1VQ9P 2WPTA 3CCSP 2N50A 2KWLA 1YJNP 2FVFA 4HKGA 5EW5E 3CCEP 3GJNA 2JU1A 3G26A 3NY7B 2FADA 2QA4P 2FQ1A 3VRLC
chains in the Genus database with same CATH topology
1X3OA 2CNRA 4CA3A 2MR8A 2KR5A 1L0HA 3RG2A 2N5IA 5KP7B 1T8KA 2ROQA 2FVAA 2VSQA 1ACPA 1KLPA 2LTEA 1DNYA 4MRTC 2FQ0A 2KOPA 3CE7A 4DG9A 2CQ8A 2MR7A 2GDYA 2AVAA 2K94A 1AF8A 2LKIA 2KW2A 4H2YC 4H2XC 2MVVA 2LL8A 2XZ0D 1L0IA 2AF8A 2LOLA 2K92A 2N98A 2MF4A 4PXHB 4PWVB 2N6ZA 2LIUA 1HY8A 2L0QA 2KOQA 2N5HA 2GDWA 2X2BA 1NQ4A 2JQ4A 2L9FA 2K0YA 2KOSA 2CGQA 3GZMA 2AFEA 2MVUA 2K0XA 2EHTA 1OR5A 2K93A 3LMOA 1HQBA 2FHSC 2PNGA 3EJEA 5HV8A 4BPHA 2N6YA 4IZ6A 5KP8B 2M5RA 2QNWA 2MY5A 1DV5A 2CG5B 4BPFA 2LMLA 3EJDA 2LPKA 4R0MA 2FAEA 2L4BA 3GZLA 2KGAA 2AFDA 4BPGA 5CZDB 2KORA 5KP6B 3EJBA 2KOOA 2JU2A 4H2WC 2L22A 2FACA 2K2QA 2FVEA 5HVCA 2KG9A 2KGCA 5EJDA 2DNWA 2KGDA 2KG8A 4NEOA 2JGPA 2EHSA 2XZ1C 2N50A 2KWLA 2FVFA 4HKGA 2LIWA 2FQ2A 2KG6A 1VKUA 1F80D 2JU1A 2KGEA 3NY7B 2FADA 2FQ1A 2GDXA 2MD9A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1X3O A;  2CNR A;  4CA3 A;  2MR8 A;  2KR5 A;  1L0H A;  3RG2 A;  2N5I A;  5KP7 B;  1T8K A;  2ROQ A;  2FVA A;  2VSQ A;  1ACP A;  1KLP A;  2LTE A;  1DNY A;  4MRT C;  2FQ0 A;  2KOP A;  3CE7 A;  4DG9 A;  2CQ8 A;  2MR7 A;  2GDY A;  2AVA A;  2K94 A;  1AF8 A;  2LKI A;  2KW2 A;  4H2Y C;  4H2X C;  2MVV A;  2LL8 A;  2XZ0 D;  1L0I A;  2AF8 A;  2LOL A;  2K92 A;  2N98 A;  2MF4 A;  4PXH B;  4PWV B;  2N6Z A;  2LIU A;  1HY8 A;  2L0Q A;  2KOQ A;  2N5H A;  2GDW A;  2X2B A;  1NQ4 A;  2JQ4 A;  2L9F A;  2K0Y A;  2KOS A;  2CGQ A;  3GZM A;  2AFE A;  2MVU A;  2K0X A;  2EHT A;  1OR5 A;  2K93 A;  3LMO A;  1HQB A;  2FHS C;  2PNG A;  3EJE A;  5HV8 A;  4BPH A;  2N6Y A;  4IZ6 A;  5KP8 B;  2M5R A;  2QNW A;  2MY5 A;  1DV5 A;  2CG5 B;  4BPF A;  2LML A;  3EJD A;  2LPK A;  4R0M A;  2FAE A;  2L4B A;  3GZL A;  2KGA A;  2AFD A;  4BPG A;  5CZD B;  2KOR A;  5KP6 B;  3EJB A;  2KOO A;  2JU2 A;  4H2W C;  2L22 A;  2FAC A;  2K2Q A;  2FVE A;  5HVC A;  2KG9 A;  2KGC A;  5EJD A;  2DNW A;  2KGD A;  2KG8 A;  4NEO A;  2JGP A;  2EHS A;  2XZ1 C;  2N50 A;  2KWL A;  2FVF A;  4HKG A;  2LIW A;  2FQ2 A;  2KG6 A;  1VKU A;  1F80 D;  2JU1 A;  2KGE A;  3NY7 B;  2FAD A;  2FQ1 A;  2GDX A;  2MD9 A; 
#chains in the Genus database with same CATH topology
 1S72 P;  3G21 A;  2CNR A;  1KD1 Q;  1BAJ A;  2BHV A;  2VSQ A;  2EFJ A;  3Q20 A;  1NJI Q;  2KOP A;  2CQ8 A;  3RG6 C;  3DPH A;  2GDY A;  3HZQ A;  1AF8 A;  3G28 A;  1QVG O;  1YIJ P;  2EG5 A;  1UNK A;  2K92 A;  4QKO A;  4PXH B;  1KQS O;  2LIU A;  2PY8 A;  1Q82 Q;  1M74 A;  1NQ4 A;  2JQ4 A;  2CGQ A;  2P9X A;  2K0X A;  2M8L A;  2VLP A;  4F37 A;  4QNB A;  4COP A;  3P05 A;  3LMO A;  1HQB A;  2N6Y A;  3H4E A;  7CEI A;  5KP8 B;  1YJW P;  1K30 A;  2QNW A;  2MY5 A;  1RO0 A;  2LML A;  4R0M A;  2L4B A;  1EMV A;  1KC8 Q;  3EJB A;  2JU2 A;  2FAC A;  2K2Q A;  2FVE A;  2KG9 A;  1FR2 A;  2KGC A;  3CCL P;  2Z46 A;  2JGP A;  4XFZ A;  1VQN P;  1W2B O;  1IMQ A;  3B4Q A;  4GR6 A;  1EOQ A;  4IPY A;  3CC4 P;  2BUO A;  1YI2 P;  4GR2 A;  1BXI A;  2CWO A;  3WBH A;  1MZ8 A;  4U0B A;  3RG2 A;  1VQK P;  3CME P;  2N5I A;  2JAZ A;  5KP7 B;  1T8K A;  1DNY A;  4MRT C;  3OW2 O;  1A43 A;  1IMP A;  2LKI A;  5JPA A;  2GYK A;  2KOD A;  2DGY A;  3CXC O;  1HY8 A;  3I56 P;  1ZMB A;  1VQL P;  2JBG A;  2L9F A;  5DCK A;  3GZM A;  2AFE A;  2MVU A;  1M6N A;  3LRY A;  5BS2 A;  4WYM A;  1RNI A;  3M1M A;  4M0I A;  1YIT P;  1CEI A;  4U0D A;  5HGM A;  2M5R A;  1DV5 A;  4XRO A;  4BPF A;  2LPK A;  3G4S P;  2PEJ A;  2LF4 A;  5CZD B;  1VQ6 P;  1GXH A;  2KOR A;  3DS0 A;  2GZG A;  2KOO A;  3CC7 P;  2L22 A;  4COC A;  5HVC A;  3G29 A;  3CCQ P;  3G0V A;  5EJD A;  3G71 P;  2DNW A;  3CCR P;  4UHP B;  1A8O A;  2PEN A;  2M8N A;  3CCV P;  2KG6 A;  3G1I A;  1VQP P;  4XFY A;  2KGE A;  2PEK A;  1E0H A;  1D1D A;  1GXG A;  1M90 Q;  2GDX A;  2MD9 A;  2XV6 A;  1IUQ A;  1E6J P;  3G6E P;  2K5X A;  2L6E A;  1QVF O;  2FVA A;  2LTE A;  2FQ0 A;  3CE7 A;  4DG9 A;  1Q81 Q;  2PEI A;  3GKL C;  2MR7 A;  2Z45 A;  2AVA A;  3HYB A;  2XXM A;  3CCU P;  2KW2 A;  4H2Y C;  2QEX P;  1VQ7 P;  3H47 A;  2LL8 A;  2XZ0 D;  2E1M A;  2JB0 A;  2MF4 A;  4PWV B;  3DS4 A;  3H0D A;  2GZE A;  2KOQ A;  2N5H A;  2GDW A;  5BS1 A;  2X2B A;  2PEO A;  3DS5 A;  2EHT A;  1Q86 Q;  2GZI A;  2PEQ A;  2FHS C;  2PNG A;  2EIA A;  4IZ6 A;  2FAE A;  3CCM P;  1YHQ P;  3B5I A;  3CPW O;  5KP6 B;  4H2W C;  3CMA P;  1JJ2 O;  1K9M Q;  5F2K A;  1GPJ A;  2KG8 A;  2VLQ A;  4NEO A;  3CD6 P;  4U0A A;  2EHS A;  2XZ1 C;  2LIW A;  2FQ2 A;  1VKU A;  1F80 D;  1RO2 A;  5F2O A;  2OAR A;  2VLN A;  2Z44 A;  3DS2 A;  3E2D A;  3MGE A;  1X3O A;  2ONT A;  4CA3 A;  2MR8 A;  5I4T G;  2KR5 A;  1L0H A;  2ROQ A;  1ACP A;  1KLP A;  2ERH A;  3DTJ A;  5HGO A;  1N8R Q;  1AYI A;  1ZNV A;  4U0F A;  2M8P A;  2K94 A;  2JYG A;  3DS1 A;  4H2X C;  1VQ8 P;  1K73 Q;  2MVV A;  2NO8 A;  2K0D X;  1L0I A;  2AF8 A;  2LOL A;  1EIA A;  2N98 A;  2JO0 A;  2N6Z A;  1Z6M A;  2XT1 A;  2L0Q A;  5F2N A;  1M6E X;  5HGN A;  4U0C A;  2K0Y A;  2KOS A;  1VQ5 P;  1K8A Q;  2PEM A;  2OTJ P;  2GZF A;  1OR5 A;  1UJZ A;  2K93 A;  2JYL A;  1Q7Y Q;  3EJE A;  5HV8 A;  3U43 A;  4BPH A;  4PH1 A;  2OTL P;  1VHN A;  1VQ4 P;  3CC2 P;  1VQM P;  3G1G A;  2CG5 B;  1VQO P;  4XRQ A;  3EJD A;  3GZL A;  2KGA A;  2VLO A;  2AFD A;  4BPG A;  4U0E A;  4XFX A;  5HGL A;  3CCJ P;  1QRJ A;  1AUM A;  1M1K Q;  3I55 P;  3DS3 A;  1YJ9 P;  2GZJ A;  3NTE A;  2KGD A;  4PH0 A;  1VQ9 P;  2WPT A;  3CCS P;  2N50 A;  2KWL A;  1YJN P;  2FVF A;  4HKG A;  5EW5 E;  3CCE P;  3GJN A;  2JU1 A;  3G26 A;  3NY7 B;  2FAD A;  2QA4 P;  2FQ1 A;  3VRL C; 
#chains in the Genus database with same CATH homology
 1X3O A;  2CNR A;  4CA3 A;  2MR8 A;  2KR5 A;  1L0H A;  3RG2 A;  2N5I A;  5KP7 B;  1T8K A;  2ROQ A;  2FVA A;  2VSQ A;  1ACP A;  1KLP A;  2LTE A;  1DNY A;  4MRT C;  2FQ0 A;  2KOP A;  3CE7 A;  4DG9 A;  2CQ8 A;  2MR7 A;  2GDY A;  2AVA A;  2K94 A;  1AF8 A;  2LKI A;  2KW2 A;  4H2Y C;  4H2X C;  2MVV A;  2LL8 A;  2XZ0 D;  1L0I A;  2AF8 A;  2LOL A;  2K92 A;  2N98 A;  2MF4 A;  4PXH B;  4PWV B;  2N6Z A;  2LIU A;  1HY8 A;  2L0Q A;  2KOQ A;  2N5H A;  2GDW A;  2X2B A;  1NQ4 A;  2JQ4 A;  2L9F A;  2K0Y A;  2KOS A;  2CGQ A;  3GZM A;  2AFE A;  2MVU A;  2K0X A;  2EHT A;  1OR5 A;  2K93 A;  3LMO A;  1HQB A;  2FHS C;  2PNG A;  3EJE A;  5HV8 A;  4BPH A;  2N6Y A;  4IZ6 A;  5KP8 B;  2M5R A;  2QNW A;  2MY5 A;  1DV5 A;  2CG5 B;  4BPF A;  2LML A;  3EJD A;  2LPK A;  4R0M A;  2FAE A;  2L4B A;  3GZL A;  2KGA A;  2AFD A;  4BPG A;  5CZD B;  2KOR A;  5KP6 B;  3EJB A;  2KOO A;  2JU2 A;  4H2W C;  2L22 A;  2FAC A;  2K2Q A;  2FVE A;  5HVC A;  2KG9 A;  2KGC A;  5EJD A;  2DNW A;  2KGD A;  2KG8 A;  4NEO A;  2JGP A;  2EHS A;  2XZ1 C;  2N50 A;  2KWL A;  2FVF A;  4HKG A;  2LIW A;  2FQ2 A;  2KG6 A;  1VKU A;  1F80 D;  2JU1 A;  2KGE A;  3NY7 B;  2FAD A;  2FQ1 A;  2GDX A;  2MD9 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...