4CP3A

The structure of bcl6 btb (poz) domain in complex with the ansamycin antibiotic rifabutin.
Total Genus 40
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
40
sequence length
122
structure length
122
Chain Sequence
ASQIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDPEINPEGFNILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Immune system
molecule keywords B-CELL LYMPHOMA 6 PROTEIN
publication title The Ansamycin Antibiotic, Rifamycin Sv, Inhibits Bcl6 Transcriptional Repression and Forms a Complex with the Bcl6-Btb/Poz Domain.
pubmed doi rcsb
source organism Homo sapiens
total genus 40
structure length 122
sequence length 122
chains with identical sequence B
ec nomenclature
pdb deposition date 2014-01-31
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.710.10 Alpha Beta 2-Layer Sandwich Potassium Channel Kv1.1; Chain A Potassium Channel Kv1.1; Chain A 4cp3A00
2P1NA 4CP3A 3DCGB 2IF5A 4W9IB 3L2OA 3GA1A 5BXBA 1P22B 3C6NA 4CRHA 4BKTB 3ZTDB 1EODA 5EUPA 2P1OA 2E32B 1NEXA 4W9FB 4WQOC 4W9KB 3C6PA 4W9GB 2OVQA 4BGCA 5HYWB 2C9WC 3B84A 2P1PA 1HV2A 3LUTB 4B95B 3ZTCB 2R9RB 1BUOA 3I3NA 4W9JB 1R28A 1DSXA 4EOZA 2PPIA 3OGLA 4W9LB 4JGHC 1FS1B 4JTDB 4W9HB 4CXTA 5IBKA 4W9DB 3C6OA 1FS2B 4W9HH 4AWJB 4AP2A 4UYIA 5A6RA 2VPKA 5LLIB 2FNJC 3M52A 3HQIA 2NN2A 3ZRCB 3OGMA 3OHVA 3M4TA 1VCBB 3LNMB 1R29A 2P1QA 1A68A 4AJYC 4HXIA 3ZRFB 3DRZA 3BIMA 2NZ0B 2OVRA 4CXIA 5BXDA 3MKSA 3M5BA 3HTMA 1EXBE 1LQBB 5BXHA 1R2BA 4UIJA 1QDVA 1CS3A 2ASTA 2IHCA 2P1MA 5H7HA 5DADA 1EOFA 4J8ZA 2YY9A 5DAFA 3HU6A 4W9EB 2OVPA 2JZ3C 5JH5B 5BO4C 3ZKJB 4ZOUA 3V7DA 4B9KB 3LBZA 5A15A 3ZNGB 1QDWA 1LDKD 3WSOB 2ASSA 1LM8C 4CXJA 1T1DA 1NN7A 4BKSB 2I2RA 4U77A 2A79B 1EOEA 4W9CB 4N9F5 4JTAB 4U2NA 3OGKA 3KVTA 3HVEA 2MA9C 3ZUNB 4U2MA 1FQVB 2IZVC 2Q81A 3FKCA 4I6JC 5H7GA 4JTCB 4B9KE 3HVEB 3OHUA 1S1GA 5HZGC 3E4UA 2E31B 2VKPA 2Z8HA 3M8VA 5FTAA 4APFA
chains in the Genus database with same CATH superfamily
2P1NA 4CP3A 3DCGB 2IF5A 4W9IB 3L2OA 3GA1A 5BXBA 1P22B 3C6NA 4CRHA 4BKTB 3ZTDB 1EODA 5EUPA 2P1OA 2E32B 1NEXA 4W9FB 4WQOC 4W9KB 3C6PA 4W9GB 2OVQA 4BGCA 5HYWB 2C9WC 3B84A 2P1PA 3DRXA 3LUTB 1HV2A 4B95B 3ZTCB 2R9RB 1BUOA 3I3NA 4W9JB 1R28A 1DSXA 4EOZA 2PPIA 3OGLA 4W9LB 4JGHC 1FS1B 4JTDB 4W9HB 4CXTA 5IBKA 4W9DB 3C6OA 1FS2B 4W9HH 4AWJB 4AP2A 4UYIA 5A6RA 2VPKA 5LLIB 2FNJC 3M52A 3HQIA 2NN2A 3ZRCB 3OGMA 3OHVA 3M4TA 1VCBB 3LNMB 1R29A 2P1QA 1A68A 4AJYC 4HXIA 3ZRFB 3DRZA 3BIMA 2NZ0B 2OVRA 4CXIA 5BXDA 3MKSA 3M5BA 3HTMA 1EXBE 1LQBB 5BXHA 1R2BA 4UIJA 1QDVA 1CS3A 2ASTA 2IHCA 2P1MA 5H7HA 5DADA 1EOFA 4J8ZA 2YY9A 5DAFA 3HU6A 4W9EB 2OVPA 2JZ3C 5JH5B 5BO4C 3ZKJB 4ZOUA 3V7DA 4B9KB 3LBZA 5A15A 3ZNGB 1QDWA 1LDKD 3WSOB 2ASSA 1LM8C 4CXJA 4YY8A 1T1DA 1NN7A 4BKSB 2I2RA 4U77A 2A79B 1EOEA 4W9CB 4ZGCA 4N9F5 3DRYA 4JTAB 4U2NA 3OGKA 3KVTA 3HVEA 2MA9C 3ZUNB 4U2MA 1FQVB 2IZVC 2Q81A 3FKCA 4I6JC 5H7GA 4JTCB 4B9KE 3HVEB 3OHUA 1S1GA 5HZGC 3E4UA 2E31B 2VKPA 2Z8HA 3M8VA 5FTAA 4APFA
chains in the Genus database with same CATH topology
2P1NA 4CP3A 3DCGB 2IF5A 4W9IB 3L2OA 3GA1A 5BXBA 1P22B 3C6NA 4CRHA 4BKTB 3ZTDB 1EODA 5EUPA 2P1OA 2E32B 1NEXA 4W9FB 4WQOC 4W9KB 3C6PA 4W9GB 2OVQA 4BGCA 5HYWB 2C9WC 3B84A 2P1PA 3DRXA 3LUTB 1HV2A 4B95B 3ZTCB 2R9RB 1BUOA 3I3NA 4W9JB 1R28A 1DSXA 4EOZA 2PPIA 3OGLA 4W9LB 4JGHC 1FS1B 4JTDB 4W9HB 4CXTA 5IBKA 4W9DB 3C6OA 1FS2B 4W9HH 4AWJB 4AP2A 4UYIA 5A6RA 2VPKA 5LLIB 2FNJC 3M52A 3HQIA 2NN2A 3ZRCB 3OGMA 3OHVA 3M4TA 1VCBB 3LNMB 1R29A 2P1QA 1A68A 4AJYC 4HXIA 3ZRFB 3DRZA 3BIMA 2NZ0B 2OVRA 4CXIA 5BXDA 3MKSA 3M5BA 3HTMA 1EXBE 1LQBB 5BXHA 1R2BA 4UIJA 1QDVA 1CS3A 2ASTA 2IHCA 2P1MA 5H7HA 5DADA 1EOFA 4J8ZA 2YY9A 5DAFA 3HU6A 4W9EB 2OVPA 2JZ3C 5JH5B 5BO4C 3ZKJB 4ZOUA 3V7DA 4B9KB 3LBZA 5A15A 3ZNGB 1QDWA 1LDKD 3WSOB 2ASSA 1LM8C 4CXJA 4YY8A 1T1DA 1NN7A 4BKSB 2I2RA 4U77A 2A79B 1EOEA 4W9CB 4ZGCA 4N9F5 3DRYA 4JTAB 4U2NA 3OGKA 3KVTA 3HVEA 2MA9C 3ZUNB 4U2MA 1FQVB 2IZVC 2Q81A 3FKCA 4I6JC 5H7GA 4JTCB 4B9KE 3HVEB 3OHUA 1S1GA 5HZGC 3E4UA 2E31B 2VKPA 2Z8HA 3M8VA 5FTAA 4APFA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2P1N A;  4CP3 A;  3DCG B;  2IF5 A;  4W9I B;  3L2O A;  3GA1 A;  5BXB A;  1P22 B;  3C6N A;  4CRH A;  4BKT B;  3ZTD B;  1EOD A;  5EUP A;  2P1O A;  2E32 B;  1NEX A;  4W9F B;  4WQO C;  4W9K B;  3C6P A;  4W9G B;  2OVQ A;  4BGC A;  5HYW B;  2C9W C;  3B84 A;  2P1P A;  1HV2 A;  3LUT B;  4B95 B;  3ZTC B;  2R9R B;  1BUO A;  3I3N A;  4W9J B;  1R28 A;  1DSX A;  4EOZ A;  2PPI A;  3OGL A;  4W9L B;  4JGH C;  1FS1 B;  4JTD B;  4W9H B;  4CXT A;  5IBK A;  4W9D B;  3C6O A;  1FS2 B;  4W9H H;  4AWJ B;  4AP2 A;  4UYI A;  5A6R A;  2VPK A;  5LLI B;  2FNJ C;  3M52 A;  3HQI A;  2NN2 A;  3ZRC B;  3OGM A;  3OHV A;  3M4T A;  1VCB B;  3LNM B;  1R29 A;  2P1Q A;  1A68 A;  4AJY C;  4HXI A;  3ZRF B;  3DRZ A;  3BIM A;  2NZ0 B;  2OVR A;  4CXI A;  5BXD A;  3MKS A;  3M5B A;  3HTM A;  1EXB E;  1LQB B;  5BXH A;  1R2B A;  4UIJ A;  1QDV A;  1CS3 A;  2AST A;  2IHC A;  2P1M A;  5H7H A;  5DAD A;  1EOF A;  4J8Z A;  2YY9 A;  5DAF A;  3HU6 A;  4W9E B;  2OVP A;  2JZ3 C;  5JH5 B;  5BO4 C;  3ZKJ B;  4ZOU A;  3V7D A;  4B9K B;  3LBZ A;  5A15 A;  3ZNG B;  1QDW A;  1LDK D;  3WSO B;  2ASS A;  1LM8 C;  4CXJ A;  1T1D A;  1NN7 A;  4BKS B;  2I2R A;  4U77 A;  2A79 B;  1EOE A;  4W9C B;  4N9F 5;  4JTA B;  4U2N A;  3OGK A;  3KVT A;  3HVE A;  2MA9 C;  3ZUN B;  4U2M A;  1FQV B;  2IZV C;  2Q81 A;  3FKC A;  4I6J C;  5H7G A;  4JTC B;  4B9K E;  3HVE B;  3OHU A;  1S1G A;  5HZG C;  3E4U A;  2E31 B;  2VKP A;  2Z8H A;  3M8V A;  5FTA A;  4APF A; 
#chains in the Genus database with same CATH topology
 2P1N A;  4CP3 A;  3DCG B;  2IF5 A;  4W9I B;  3L2O A;  3GA1 A;  5BXB A;  1P22 B;  3C6N A;  4CRH A;  4BKT B;  3ZTD B;  1EOD A;  5EUP A;  2P1O A;  2E32 B;  1NEX A;  4W9F B;  4WQO C;  4W9K B;  3C6P A;  4W9G B;  2OVQ A;  4BGC A;  5HYW B;  2C9W C;  3B84 A;  2P1P A;  3DRX A;  3LUT B;  1HV2 A;  4B95 B;  3ZTC B;  2R9R B;  1BUO A;  3I3N A;  4W9J B;  1R28 A;  1DSX A;  4EOZ A;  2PPI A;  3OGL A;  4W9L B;  4JGH C;  1FS1 B;  4JTD B;  4W9H B;  4CXT A;  5IBK A;  4W9D B;  3C6O A;  1FS2 B;  4W9H H;  4AWJ B;  4AP2 A;  4UYI A;  5A6R A;  2VPK A;  5LLI B;  2FNJ C;  3M52 A;  3HQI A;  2NN2 A;  3ZRC B;  3OGM A;  3OHV A;  3M4T A;  1VCB B;  3LNM B;  1R29 A;  2P1Q A;  1A68 A;  4AJY C;  4HXI A;  3ZRF B;  3DRZ A;  3BIM A;  2NZ0 B;  2OVR A;  4CXI A;  5BXD A;  3MKS A;  3M5B A;  3HTM A;  1EXB E;  1LQB B;  5BXH A;  1R2B A;  4UIJ A;  1QDV A;  1CS3 A;  2AST A;  2IHC A;  2P1M A;  5H7H A;  5DAD A;  1EOF A;  4J8Z A;  2YY9 A;  5DAF A;  3HU6 A;  4W9E B;  2OVP A;  2JZ3 C;  5JH5 B;  5BO4 C;  3ZKJ B;  4ZOU A;  3V7D A;  4B9K B;  3LBZ A;  5A15 A;  3ZNG B;  1QDW A;  1LDK D;  3WSO B;  2ASS A;  1LM8 C;  4CXJ A;  4YY8 A;  1T1D A;  1NN7 A;  4BKS B;  2I2R A;  4U77 A;  2A79 B;  1EOE A;  4W9C B;  4ZGC A;  4N9F 5;  3DRY A;  4JTA B;  4U2N A;  3OGK A;  3KVT A;  3HVE A;  2MA9 C;  3ZUN B;  4U2M A;  1FQV B;  2IZV C;  2Q81 A;  3FKC A;  4I6J C;  5H7G A;  4JTC B;  4B9K E;  3HVE B;  3OHU A;  1S1G A;  5HZG C;  3E4U A;  2E31 B;  2VKP A;  2Z8H A;  3M8V A;  5FTA A;  4APF A; 
#chains in the Genus database with same CATH homology
 2P1N A;  4CP3 A;  3DCG B;  2IF5 A;  4W9I B;  3L2O A;  3GA1 A;  5BXB A;  1P22 B;  3C6N A;  4CRH A;  4BKT B;  3ZTD B;  1EOD A;  5EUP A;  2P1O A;  2E32 B;  1NEX A;  4W9F B;  4WQO C;  4W9K B;  3C6P A;  4W9G B;  2OVQ A;  4BGC A;  5HYW B;  2C9W C;  3B84 A;  2P1P A;  3DRX A;  3LUT B;  1HV2 A;  4B95 B;  3ZTC B;  2R9R B;  1BUO A;  3I3N A;  4W9J B;  1R28 A;  1DSX A;  4EOZ A;  2PPI A;  3OGL A;  4W9L B;  4JGH C;  1FS1 B;  4JTD B;  4W9H B;  4CXT A;  5IBK A;  4W9D B;  3C6O A;  1FS2 B;  4W9H H;  4AWJ B;  4AP2 A;  4UYI A;  5A6R A;  2VPK A;  5LLI B;  2FNJ C;  3M52 A;  3HQI A;  2NN2 A;  3ZRC B;  3OGM A;  3OHV A;  3M4T A;  1VCB B;  3LNM B;  1R29 A;  2P1Q A;  1A68 A;  4AJY C;  4HXI A;  3ZRF B;  3DRZ A;  3BIM A;  2NZ0 B;  2OVR A;  4CXI A;  5BXD A;  3MKS A;  3M5B A;  3HTM A;  1EXB E;  1LQB B;  5BXH A;  1R2B A;  4UIJ A;  1QDV A;  1CS3 A;  2AST A;  2IHC A;  2P1M A;  5H7H A;  5DAD A;  1EOF A;  4J8Z A;  2YY9 A;  5DAF A;  3HU6 A;  4W9E B;  2OVP A;  2JZ3 C;  5JH5 B;  5BO4 C;  3ZKJ B;  4ZOU A;  3V7D A;  4B9K B;  3LBZ A;  5A15 A;  3ZNG B;  1QDW A;  1LDK D;  3WSO B;  2ASS A;  1LM8 C;  4CXJ A;  4YY8 A;  1T1D A;  1NN7 A;  4BKS B;  2I2R A;  4U77 A;  2A79 B;  1EOE A;  4W9C B;  4ZGC A;  4N9F 5;  3DRY A;  4JTA B;  4U2N A;  3OGK A;  3KVT A;  3HVE A;  2MA9 C;  3ZUN B;  4U2M A;  1FQV B;  2IZV C;  2Q81 A;  3FKC A;  4I6J C;  5H7G A;  4JTC B;  4B9K E;  3HVE B;  3OHU A;  1S1G A;  5HZG C;  3E4U A;  2E31 B;  2VKP A;  2Z8H A;  3M8V A;  5FTA A;  4APF A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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