4CSQA

Nmr solution structure of pa3793 from pseudomonas aeruginosa
Total Genus 26
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
26
sequence length
113
structure length
113
Chain Sequence
GSHMTTQRYLLDELETADMLEIDGLHAWRFELNENLLDQADLAAEADQPFASEDWVLAVESLDGRTRREWRFSYNAVMEAEPQADGESWRLTTGEGAYQLRCLGAVSASGEDE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Structural protein
molecule keywords UNCHARACTERIZED PROTEIN
publication title NMR Solution Structure of Pa3793 from Pseudomonas
rcsb
source organism Pseudomonas aeruginosa
total genus 26
structure length 113
sequence length 113
ec nomenclature
pdb deposition date 2014-03-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF18629 DUF5629 Family of unknown function (DUF5629)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.29.190 Mainly Beta Roll PH-domain like PH-domain like 4csqA00
4CSQA
chains in the Genus database with same CATH superfamily
5D3XA 1KI1B 1RRPB 1U29A 4IAPA 2DYQA 4TYZA 4GMVA 5IRSA 2ZKMX 1X1GA 4Y94A 2MFQA 4DIXA 3DXDA 3TW1A 3NWAA 2I1JA 2AL6A 1K5DB 2HE7A 2K2UA 3WYFB 2MWNB 2IFSA 1V5UA 1BWNA 4GNKB 4YONA 4DX8A 2D9WA 2RVBB 2CAYA 1MAIA 1ZYIA 3SYXA 3PEGA 2OTXA 2FJUB 4ZRIA 4NY0A 1BTNA 3HK0A 1SHCA 3KRXA 4HAWB 1FOEA 2N0YA 4KHBA 1WVHA 3ZVRA 1ZSQA 2KCJA 2KIEA 4YL8A 3TVVA 4CYEA 2QKLA 5HE0A 5JHGA 2W2XC 3QBVB 4KHAA 3SV1A 2J59M 2VRWB 3QIJA 1DDVA 4K2PA 4CHJA 3NSUA 1V89A 4DBBA 3X23A 2YS1A 1XKEA 2GJYA 3AU5A 2CODA 2X18A 3A8PA 1FAOA 4MK0A 5KQ1A 4K2OA 2VSZA 5C5BA 1QC6A 1N3HA 4L6EA 1Z87A 4GXBA 4HAZB 1FB8A 4ZRKA 2Z14A 4IOYX 2Z0QA 1V88A 4IFSA 3BJIA 1J19A 2ELBA 3LJUX 2ZPYA 5C16A 2COAA 2Q13A 4DX90 1DDWA 3OHMB 3U8ZA 4A5KA 1SGHA 1MKEA 5LG4B 1WG7A 5D3WA 2UZSA 1I2HA 1P3RA 2VKIA 3ZDTA 1B55A 2D9XA 2GCLA 4Z2MB 3CXBB 4HATB 4Z2NA 4NSWA 5M4YB 2YT1A 3T06A 4CSQA 2CY5A 1DBHA 5DI9B 2K49A 3NWDA 4GZUA 2EMSA 3U7DA 3ML4A 2QKMA 1NTYA 1XD4A 1X86A 1U5FA 1EAZA 1V5PA 1NTVA 2D9ZA 3NWFA 4GPTB 5I2MA 1I7AA 5J3TA 4H8SA 4HB3B 1X05A 4EMOA 3PZDA 5J3QA 3PG7A 2W2WA 3HW2B 4EJNA 4KVGB 3P6AA 1UEFA 5CLLB 1LB1A 2KR0A 1GG3A 4CHMA 1WGQA 1FHWA 3SNHA 4C0AA 1M7EA 2D10A 1DDMA 3D8EA 3VIAA 2RLOA 1U5EA 2Y7BA 3G9WA 4EKUA 5FI1A 2HTHB 5JP4A 4A6KA 1V5MA 2N23A 1MPHA 1ZC3B 2NMBA 2UZRA 3F0WA 4F7UP 2KGXB 4HHVA 2DKPA 1GC7A 1Y19B 1V61A 4GN1A 3KRWA 1EVHA 2LG1A 3TCAA 2P8VA 4F7HA 3A8QA 1DROA 2DHJA 1UNRA 3ODWA 2UVMA 3PP2A 4D0NB 4D6WA 5DHAB 4OT1A 2DN6A 1TJ6A 2I5FA 1E5WA 3FM8C 2R0DA 5HE3A 2ROZB 1AQCA 1UPQA 2GUMA 2KUPA 1H4RA 1FGYA 2YVCA 3DXEA 2D9YA 3F5RA 4TKNA 1RJ2A 4HAUB 3GYPA 3SO6A 1WI1A 3KZ1A 1BAKA 1BTKA 2RGNB 1ISNA 1U5GA 1FHXA 1WJ1A 4L1RA 2EJ8A 5DIFB 2YRYA 2DHKA 3B77A 5GOWB 2IYBA 1MIZB 4MT7A 2L2IA 2EMTA 4BBKA 1ZVRA 3V5WA 2XQNM 1U5DA 5EFXA 2D4QA 1MIXA 3DCXA 3PVWA 2DLWA 5L81A 2GCJA 3ODOA 4K81A 3ULCA 5DH9B 5D27A 2I1KA 4XWXA 4OSNA 4HB4B 4ZRJA 1J0WA 4HB2B 5J3YA 1W1DA 2NBVA 2YF0A 2DTCA 1XX0A 1P6SA 1ZC4B 5FI0A 1ZM0A 2Y8FA 1EF1A 2J0JA 2BCJA 4HSIA 3N7CA 2DHIA 3MDBC 5D3VA 2PZ1A 2H7DA 2P0DA 3P7ZA 1X1FA 2LULA 1PMSA 2H7EA 2K00A 5HE2A 5DHFB 3PVLA 1H10A 1NI2A 1T77A 3U12A 2KUQA 3A58A 1Q67A 5C79A 2Z0OA 2W2XD 2CY4A 3UZTA 1PLSA 2M38A 2YS5A 3D8DA 3VOQA 5LOPB 4WVFB 3FSSA 1AWEA 3QWMA 2NZ8B 3HQCA 1X11A 2DA0A 2AEHA 1K5GB 5JLJB 2OQBA 3KY9A 4GMXB 4MY6A 3NW8A 5LONB 3CIKA 2MKRA 3AU4A 4A6HA 3IVFA 2ADZA 1KZ7A 2MDXA 3TFMA 2RSGA 2YSZA 4K17A 3A98B 5KQ4A 3O96A 2Z13A 3BINA 2COFA 4KHOA 2YS3A 1LW3A 2D2QA 4A6FB 2CRFA 3PSCA 1TXDA 3D8FA 2YT2A 2LOXA 3HSAA 2DKQA 1Y5OA 4PQ0A 5JHHA 2GS0A 2R09A 1PFJA 2RUKB 2FJLA 2ELAA 1EGXA 3PVUA 2LKOA 4HB0B 1U2BA 5CLQB 2L1CA 3FEHA 1M7RA 3TO1A 1U27A 1XODA 1OMWA 3OANA 4HAXB 3ULBA 3DXCA 1NU2A 3SUZA 4B6HA 3AJ4A 2DYNA 4QJ3B 1QQGA 4QJ4B 2EC1A 2RRFA 2P0HA 3M1IB 2D11A 2Z59A 1XR0B 4HDOA 1KZGA 4HAVB 3WA0A 1OQNA 5I2SA 2P0FA 4HAYB 2R2YA 2LOZA 3FVCA 1MI1A 2RNRB 4KHBB 2K8EA 1FGZA 5HE1A 5KCVA 2DFKA 4QJ5B 2I5CA 2KIGA 2G35A 2ROVA 2D9VA 2E2XA 1WJMA 4WJ7A 4HDQA 3HIEA 2V76A 1FHOA 2DX1A 1DYNA 1W1HA 2M14A 2J0KA 4F7GA 2LYDA 2Z4DA 1UNQA 1IRSA 1UPRA 3ODXA 4KAXB 3GYOA 2Z0PA 1TQZA 4P7IA 2J0MA 3KSYA 4A6FA 3RCPA 2YT0A 5D3YA 4PNKA 1MK7B 1OY2A 2COCA 4QXAB 1UNPA 2K2JA 5C5BB 1MK9B 1W1GA 3MPXA 2JP2A 4WSFA 2DX5A 4DXAB 1WGUA 5C6RA 1XCGA 4GOUA 2Y8GA 1GC6A 1P5TA
chains in the Genus database with same CATH topology
4GNKB 3NWFA 4Z2NA 2R2YA 5I2MA 3GYOA 4PQ0A 5M4YB 4KHAA 2GUMA 3FVCA 2Z14A 3NW8A 4IOYX 4IFSA 4OSNA 2KUQA 1ZYIA 3U12A 4QJ3B 5IRSA 2ZKMX 4QJ4B 4KHBB 3A58A 2FJUB 2K8EA 2RRFA 5I2SA 4CSQA 4DIXA 4QJ5B 2NBVA 2KIGA 3GYPA 3TW1A 3NWAA 3OHMB 2K49A 3NWDA 4QXAB 2KR0A 4D6WA 5LG4B 3HIEA 4HSIA 2Z59A 4OT1A 3FSSA 2Z13A 3TVVA 4KHOA 4KHBA 4L1RA 3TO1A 4GOUA 2GCLA 4Z2MB 2Z4DA 2GCJA 2KIEA 2YT2A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4CSQ A; 
#chains in the Genus database with same CATH topology
 5D3X A;  1KI1 B;  1RRP B;  1U29 A;  4IAP A;  2DYQ A;  4TYZ A;  4GMV A;  5IRS A;  2ZKM X;  1X1G A;  4Y94 A;  2MFQ A;  4DIX A;  3DXD A;  3TW1 A;  3NWA A;  2I1J A;  2AL6 A;  1K5D B;  2HE7 A;  2K2U A;  3WYF B;  2MWN B;  2IFS A;  1V5U A;  1BWN A;  4GNK B;  4YON A;  4DX8 A;  2D9W A;  2RVB B;  2CAY A;  1MAI A;  1ZYI A;  3SYX A;  3PEG A;  2OTX A;  2FJU B;  4ZRI A;  4NY0 A;  1BTN A;  3HK0 A;  1SHC A;  3KRX A;  4HAW B;  1FOE A;  2N0Y A;  4KHB A;  1WVH A;  3ZVR A;  1ZSQ A;  2KCJ A;  2KIE A;  4YL8 A;  3TVV A;  4CYE A;  2QKL A;  5HE0 A;  5JHG A;  2W2X C;  3QBV B;  4KHA A;  3SV1 A;  2J59 M;  2VRW B;  3QIJ A;  1DDV A;  4K2P A;  4CHJ A;  3NSU A;  1V89 A;  4DBB A;  3X23 A;  2YS1 A;  1XKE A;  2GJY A;  3AU5 A;  2COD A;  2X18 A;  3A8P A;  1FAO A;  4MK0 A;  5KQ1 A;  4K2O A;  2VSZ A;  5C5B A;  1QC6 A;  1N3H A;  4L6E A;  1Z87 A;  4GXB A;  4HAZ B;  1FB8 A;  4ZRK A;  2Z14 A;  4IOY X;  2Z0Q A;  1V88 A;  4IFS A;  3BJI A;  1J19 A;  2ELB A;  3LJU X;  2ZPY A;  5C16 A;  2COA A;  2Q13 A;  4DX9 0;  1DDW A;  3OHM B;  3U8Z A;  4A5K A;  1SGH A;  1MKE A;  5LG4 B;  1WG7 A;  5D3W A;  2UZS A;  1I2H A;  1P3R A;  2VKI A;  3ZDT A;  1B55 A;  2D9X A;  2GCL A;  4Z2M B;  3CXB B;  4HAT B;  4Z2N A;  4NSW A;  5M4Y B;  2YT1 A;  3T06 A;  4CSQ A;  2CY5 A;  1DBH A;  5DI9 B;  2K49 A;  3NWD A;  4GZU A;  2EMS A;  3U7D A;  3ML4 A;  2QKM A;  1NTY A;  1XD4 A;  1X86 A;  1U5F A;  1EAZ A;  1V5P A;  1NTV A;  2D9Z A;  3NWF A;  4GPT B;  5I2M A;  1I7A A;  5J3T A;  4H8S A;  4HB3 B;  1X05 A;  4EMO A;  3PZD A;  5J3Q A;  3PG7 A;  2W2W A;  3HW2 B;  4EJN A;  4KVG B;  3P6A A;  1UEF A;  5CLL B;  1LB1 A;  2KR0 A;  1GG3 A;  4CHM A;  1WGQ A;  1FHW A;  3SNH A;  4C0A A;  1M7E A;  2D10 A;  1DDM A;  3D8E A;  3VIA A;  2RLO A;  1U5E A;  2Y7B A;  3G9W A;  4EKU A;  5FI1 A;  2HTH B;  5JP4 A;  4A6K A;  1V5M A;  2N23 A;  1MPH A;  1ZC3 B;  2NMB A;  2UZR A;  3F0W A;  4F7U P;  2KGX B;  4HHV A;  2DKP A;  1GC7 A;  1Y19 B;  1V61 A;  4GN1 A;  3KRW A;  1EVH A;  2LG1 A;  3TCA A;  2P8V A;  4F7H A;  3A8Q A;  1DRO A;  2DHJ A;  1UNR A;  3ODW A;  2UVM A;  3PP2 A;  4D0N B;  4D6W A;  5DHA B;  4OT1 A;  2DN6 A;  1TJ6 A;  2I5F A;  1E5W A;  3FM8 C;  2R0D A;  5HE3 A;  2ROZ B;  1AQC A;  1UPQ A;  2GUM A;  2KUP A;  1H4R A;  1FGY A;  2YVC A;  3DXE A;  2D9Y A;  3F5R A;  4TKN A;  1RJ2 A;  4HAU B;  3GYP A;  3SO6 A;  1WI1 A;  3KZ1 A;  1BAK A;  1BTK A;  2RGN B;  1ISN A;  1U5G A;  1FHX A;  1WJ1 A;  4L1R A;  2EJ8 A;  5DIF B;  2YRY A;  2DHK A;  3B77 A;  5GOW B;  2IYB A;  1MIZ B;  4MT7 A;  2L2I A;  2EMT A;  4BBK A;  1ZVR A;  3V5W A;  2XQN M;  1U5D A;  5EFX A;  2D4Q A;  1MIX A;  3DCX A;  3PVW A;  2DLW A;  5L81 A;  2GCJ A;  3ODO A;  4K81 A;  3ULC A;  5DH9 B;  5D27 A;  2I1K A;  4XWX A;  4OSN A;  4HB4 B;  4ZRJ A;  1J0W A;  4HB2 B;  5J3Y A;  1W1D A;  2NBV A;  2YF0 A;  2DTC A;  1XX0 A;  1P6S A;  1ZC4 B;  5FI0 A;  1ZM0 A;  2Y8F A;  1EF1 A;  2J0J A;  2BCJ A;  4HSI A;  3N7C A;  2DHI A;  3MDB C;  5D3V A;  2PZ1 A;  2H7D A;  2P0D A;  3P7Z A;  1X1F A;  2LUL A;  1PMS A;  2H7E A;  2K00 A;  5HE2 A;  5DHF B;  3PVL A;  1H10 A;  1NI2 A;  1T77 A;  3U12 A;  2KUQ A;  3A58 A;  1Q67 A;  5C79 A;  2Z0O A;  2W2X D;  2CY4 A;  3UZT A;  1PLS A;  2M38 A;  2YS5 A;  3D8D A;  3VOQ A;  5LOP B;  4WVF B;  3FSS A;  1AWE A;  3QWM A;  2NZ8 B;  3HQC A;  1X11 A;  2DA0 A;  2AEH A;  1K5G B;  5JLJ B;  2OQB A;  3KY9 A;  4GMX B;  4MY6 A;  3NW8 A;  5LON B;  3CIK A;  2MKR A;  3AU4 A;  4A6H A;  3IVF A;  2ADZ A;  1KZ7 A;  2MDX A;  3TFM A;  2RSG A;  2YSZ A;  4K17 A;  3A98 B;  5KQ4 A;  3O96 A;  2Z13 A;  3BIN A;  2COF A;  4KHO A;  2YS3 A;  1LW3 A;  2D2Q A;  4A6F B;  2CRF A;  3PSC A;  1TXD A;  3D8F A;  2YT2 A;  2LOX A;  3HSA A;  2DKQ A;  1Y5O A;  4PQ0 A;  5JHH A;  2GS0 A;  2R09 A;  1PFJ A;  2RUK B;  2FJL A;  2ELA A;  1EGX A;  3PVU A;  2LKO A;  4HB0 B;  1U2B A;  5CLQ B;  2L1C A;  3FEH A;  1M7R A;  3TO1 A;  1U27 A;  1XOD A;  1OMW A;  3OAN A;  4HAX B;  3ULB A;  3DXC A;  1NU2 A;  3SUZ A;  4B6H A;  3AJ4 A;  2DYN A;  4QJ3 B;  1QQG A;  4QJ4 B;  2EC1 A;  2RRF A;  2P0H A;  3M1I B;  2D11 A;  2Z59 A;  1XR0 B;  4HDO A;  1KZG A;  4HAV B;  3WA0 A;  1OQN A;  5I2S A;  2P0F A;  4HAY B;  2R2Y A;  2LOZ A;  3FVC A;  1MI1 A;  2RNR B;  4KHB B;  2K8E A;  1FGZ A;  5HE1 A;  5KCV A;  2DFK A;  4QJ5 B;  2I5C A;  2KIG A;  2G35 A;  2ROV A;  2D9V A;  2E2X A;  1WJM A;  4WJ7 A;  4HDQ A;  3HIE A;  2V76 A;  1FHO A;  2DX1 A;  1DYN A;  1W1H A;  2M14 A;  2J0K A;  4F7G A;  2LYD A;  2Z4D A;  1UNQ A;  1IRS A;  1UPR A;  3ODX A;  4KAX B;  3GYO A;  2Z0P A;  1TQZ A;  4P7I A;  2J0M A;  3KSY A;  4A6F A;  3RCP A;  2YT0 A;  5D3Y A;  4PNK A;  1MK7 B;  1OY2 A;  2COC A;  4QXA B;  1UNP A;  2K2J A;  5C5B B;  1MK9 B;  1W1G A;  3MPX A;  2JP2 A;  4WSF A;  2DX5 A;  4DXA B;  1WGU A;  5C6R A;  1XCG A;  4GOU A;  2Y8G A;  1GC6 A;  1P5T A; 
#chains in the Genus database with same CATH homology
 4GNK B;  3NWF A;  4Z2N A;  2R2Y A;  5I2M A;  3GYO A;  4PQ0 A;  5M4Y B;  4KHA A;  2GUM A;  3FVC A;  2Z14 A;  3NW8 A;  4IOY X;  4IFS A;  4OSN A;  2KUQ A;  1ZYI A;  3U12 A;  4QJ3 B;  5IRS A;  2ZKM X;  4QJ4 B;  4KHB B;  3A58 A;  2FJU B;  2K8E A;  2RRF A;  5I2S A;  4CSQ A;  4DIX A;  4QJ5 B;  2NBV A;  2KIG A;  3GYP A;  3TW1 A;  3NWA A;  3OHM B;  2K49 A;  3NWD A;  4QXA B;  2KR0 A;  4D6W A;  5LG4 B;  3HIE A;  4HSI A;  2Z59 A;  4OT1 A;  3FSS A;  2Z13 A;  3TVV A;  4KHO A;  4KHB A;  4L1R A;  3TO1 A;  4GOU A;  2GCL A;  4Z2M B;  2Z4D A;  2GCJ A;  2KIE A;  2YT2 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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