4DWNA

Crystal structure of human bincard card
Total Genus 35
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
35
sequence length
97
structure length
96
Chain Sequence
DQTYCDRLVQDTPFLTGHGRLSEQQVDRIILQLNRYYPQILTNKEAEKFRNPKASLRVRLDLLSHLQRSGERDCQEFYRALYIHAQPLHSRLPSRH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Apoptosis
molecule keywords Bcl10-interacting CARD protein
publication title The structure of the caspase recruitment domain of BinCARD reveals that all three cysteines can be oxidized.
pubmed doi rcsb
source organism Homo sapiens
total genus 35
structure length 96
sequence length 97
chains with identical sequence B
ec nomenclature
pdb deposition date 2012-02-26
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.533.10 Mainly Alpha Orthogonal Bundle Death Domain, Fas Death Domain, Fas 4dwnA00
3T6PA 3YGSC 3LQQA 4IZ7B 1D2ZB 2IB1A 1C15A 2OF5H 2L9MA 1DDFA 4JQWA 2DBHA 4QOBA 2BBRA 2DBDA 4E9MA 3YGSP 4O9FA 4N1LA 4O9LA 3LQRA 4D8OA 2MS8A 2DO9A 2G7RA 1N3KA 4P4HA 2N80A 4IZAB 2B1WA 1PN5A 3KATA 1FADA 4IZ5E 2O71A 1ICHA 4ZBWA 3MOPG 4A2WA 2YVIA 2M5VA 1E41A 2N97A 2MPCA 2N7ZA 2A9IA 1DGNA 2MB9A 4FH0A 1WXPA 2OF5A 2NAQA 4N1KA 2NZ7A 2P1HA 4RHWE 2BBZA 2YGSA 3J63A 4DWNA 4EWIA 2YU0A 4I16A 4O7QA 3MOPA 2LWDA 3QF2A 4RHWA 2D96A 2N83A 1Z6TA 4N1JA 1YGOA 3CRDA 2MS7A 4F42A 3EZQA 1NGRA 4LWDA 1A1ZA 2N00A 2HM2Q 4M9ZA 4M9SA 2A5YB 1CWWA 1A1WA 3MOPK 1UCPA 4O6XA 3EZQB 2NSNA 2VGQA 4P4HI 2GF5A 2DBFA 2L6AA 2DBGA 2LWEA 4UZ0A 4A2QA 2N1FA 2YQFA 1WMGA 2KN6A 1D2ZA 1E3YA 3J6JA 1CY5A 4M9XA 4JUPA 2F1SA 4F44A 2LS7A 4NQKA 1WH4A 2KM6A 3CL3A 2MN4A
chains in the Genus database with same CATH superfamily
3T6PA 3YGSC 3LQQA 4IZ7B 1D2ZB 2IB1A 1C15A 2OF5H 2L9MA 1DDFA 4JQWA 2DBHA 4QOBA 2BBRA 2DBDA 4E9MA 3YGSP 4O9FA 4N1LA 4O9LA 3LQRA 4D8OA 2MS8A 2DO9A 2G7RA 1N3KA 4P4HA 2N80A 4IZAB 2B1WA 1PN5A 3KATA 1FADA 4IZ5E 2O71A 1ICHA 4ZBWA 3MOPG 4A2WA 2YVIA 2M5VA 1E41A 2N97A 2MPCA 2N7ZA 2A9IA 1DGNA 2MB9A 4FH0A 1WXPA 2OF5A 2NAQA 4N1KA 2NZ7A 2P1HA 4RHWE 2BBZA 2YGSA 3J63A 4DWNA 4EWIA 2YU0A 4I16A 4O7QA 3MOPA 2LWDA 3QF2A 4RHWA 2D96A 2N83A 1Z6TA 4N1JA 1YGOA 3CRDA 2MS7A 4F42A 3EZQA 1NGRA 2MJMA 4LWDA 1A1ZA 2N00A 2HM2Q 4M9ZA 4M9SA 2XV9A 2A5YB 1CWWA 1A1WA 3MOPK 1UCPA 4O6XA 3EZQB 2NSNA 2VGQA 4P4HI 2GF5A 2DBFA 2L6AA 2DBGA 2LWEA 4UZ0A 4A2QA 2N1FA 2YQFA 1WMGA 2KN6A 1D2ZA 1E3YA 3J6JA 1CY5A 4M9XA 4JUPA 2F1SA 4F44A 2LS7A 4NQKA 1WH4A 2KM6A 3CL3A 2MN4A
chains in the Genus database with same CATH topology
3T6PA 3YGSC 3LQQA 4IZ7B 1D2ZB 2IB1A 1C15A 2OF5H 2L9MA 1DDFA 4JQWA 2DBHA 4QOBA 2BBRA 2DBDA 4E9MA 3YGSP 4O9FA 4N1LA 4O9LA 3LQRA 4D8OA 2MS8A 2DO9A 2G7RA 1N3KA 4P4HA 2N80A 4IZAB 2B1WA 1PN5A 3KATA 1FADA 4IZ5E 2O71A 1ICHA 4ZBWA 3MOPG 4A2WA 2YVIA 2M5VA 1E41A 2N97A 2MPCA 2N7ZA 2A9IA 1DGNA 2MB9A 4FH0A 1WXPA 2OF5A 2NAQA 4N1KA 2NZ7A 2P1HA 4RHWE 2BBZA 2YGSA 3J63A 4DWNA 4EWIA 2YU0A 4I16A 4O7QA 3MOPA 2LWDA 3QF2A 4RHWA 2D96A 2N83A 1Z6TA 4N1JA 1YGOA 3CRDA 2MS7A 4F42A 3EZQA 1NGRA 2MJMA 4LWDA 1A1ZA 2N00A 2HM2Q 4M9ZA 4M9SA 2XV9A 2A5YB 1CWWA 1A1WA 3MOPK 1UCPA 4O6XA 3EZQB 2NSNA 2VGQA 4P4HI 2GF5A 2DBFA 2L6AA 2DBGA 2LWEA 4UZ0A 4A2QA 2N1FA 2YQFA 1WMGA 2KN6A 1D2ZA 1E3YA 3J6JA 1CY5A 4M9XA 4JUPA 2F1SA 4F44A 2LS7A 4NQKA 1WH4A 2KM6A 3CL3A 2MN4A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3T6P A;  3YGS C;  3LQQ A;  4IZ7 B;  1D2Z B;  2IB1 A;  1C15 A;  2OF5 H;  2L9M A;  1DDF A;  4JQW A;  2DBH A;  4QOB A;  2BBR A;  2DBD A;  4E9M A;  3YGS P;  4O9F A;  4N1L A;  4O9L A;  3LQR A;  4D8O A;  2MS8 A;  2DO9 A;  2G7R A;  1N3K A;  4P4H A;  2N80 A;  4IZA B;  2B1W A;  1PN5 A;  3KAT A;  1FAD A;  4IZ5 E;  2O71 A;  1ICH A;  4ZBW A;  3MOP G;  4A2W A;  2YVI A;  2M5V A;  1E41 A;  2N97 A;  2MPC A;  2N7Z A;  2A9I A;  1DGN A;  2MB9 A;  4FH0 A;  1WXP A;  2OF5 A;  2NAQ A;  4N1K A;  2NZ7 A;  2P1H A;  4RHW E;  2BBZ A;  2YGS A;  3J63 A;  4DWN A;  4EWI A;  2YU0 A;  4I16 A;  4O7Q A;  3MOP A;  2LWD A;  3QF2 A;  4RHW A;  2D96 A;  2N83 A;  1Z6T A;  4N1J A;  1YGO A;  3CRD A;  2MS7 A;  4F42 A;  3EZQ A;  1NGR A;  4LWD A;  1A1Z A;  2N00 A;  2HM2 Q;  4M9Z A;  4M9S A;  2A5Y B;  1CWW A;  1A1W A;  3MOP K;  1UCP A;  4O6X A;  3EZQ B;  2NSN A;  2VGQ A;  4P4H I;  2GF5 A;  2DBF A;  2L6A A;  2DBG A;  2LWE A;  4UZ0 A;  4A2Q A;  2N1F A;  2YQF A;  1WMG A;  2KN6 A;  1D2Z A;  1E3Y A;  3J6J A;  1CY5 A;  4M9X A;  4JUP A;  2F1S A;  4F44 A;  2LS7 A;  4NQK A;  1WH4 A;  2KM6 A;  3CL3 A;  2MN4 A; 
#chains in the Genus database with same CATH topology
 3T6P A;  3YGS C;  3LQQ A;  4IZ7 B;  1D2Z B;  2IB1 A;  1C15 A;  2OF5 H;  2L9M A;  1DDF A;  4JQW A;  2DBH A;  4QOB A;  2BBR A;  2DBD A;  4E9M A;  3YGS P;  4O9F A;  4N1L A;  4O9L A;  3LQR A;  4D8O A;  2MS8 A;  2DO9 A;  2G7R A;  1N3K A;  4P4H A;  2N80 A;  4IZA B;  2B1W A;  1PN5 A;  3KAT A;  1FAD A;  4IZ5 E;  2O71 A;  1ICH A;  4ZBW A;  3MOP G;  4A2W A;  2YVI A;  2M5V A;  1E41 A;  2N97 A;  2MPC A;  2N7Z A;  2A9I A;  1DGN A;  2MB9 A;  4FH0 A;  1WXP A;  2OF5 A;  2NAQ A;  4N1K A;  2NZ7 A;  2P1H A;  4RHW E;  2BBZ A;  2YGS A;  3J63 A;  4DWN A;  4EWI A;  2YU0 A;  4I16 A;  4O7Q A;  3MOP A;  2LWD A;  3QF2 A;  4RHW A;  2D96 A;  2N83 A;  1Z6T A;  4N1J A;  1YGO A;  3CRD A;  2MS7 A;  4F42 A;  3EZQ A;  1NGR A;  2MJM A;  4LWD A;  1A1Z A;  2N00 A;  2HM2 Q;  4M9Z A;  4M9S A;  2XV9 A;  2A5Y B;  1CWW A;  1A1W A;  3MOP K;  1UCP A;  4O6X A;  3EZQ B;  2NSN A;  2VGQ A;  4P4H I;  2GF5 A;  2DBF A;  2L6A A;  2DBG A;  2LWE A;  4UZ0 A;  4A2Q A;  2N1F A;  2YQF A;  1WMG A;  2KN6 A;  1D2Z A;  1E3Y A;  3J6J A;  1CY5 A;  4M9X A;  4JUP A;  2F1S A;  4F44 A;  2LS7 A;  4NQK A;  1WH4 A;  2KM6 A;  3CL3 A;  2MN4 A; 
#chains in the Genus database with same CATH homology
 3T6P A;  3YGS C;  3LQQ A;  4IZ7 B;  1D2Z B;  2IB1 A;  1C15 A;  2OF5 H;  2L9M A;  1DDF A;  4JQW A;  2DBH A;  4QOB A;  2BBR A;  2DBD A;  4E9M A;  3YGS P;  4O9F A;  4N1L A;  4O9L A;  3LQR A;  4D8O A;  2MS8 A;  2DO9 A;  2G7R A;  1N3K A;  4P4H A;  2N80 A;  4IZA B;  2B1W A;  1PN5 A;  3KAT A;  1FAD A;  4IZ5 E;  2O71 A;  1ICH A;  4ZBW A;  3MOP G;  4A2W A;  2YVI A;  2M5V A;  1E41 A;  2N97 A;  2MPC A;  2N7Z A;  2A9I A;  1DGN A;  2MB9 A;  4FH0 A;  1WXP A;  2OF5 A;  2NAQ A;  4N1K A;  2NZ7 A;  2P1H A;  4RHW E;  2BBZ A;  2YGS A;  3J63 A;  4DWN A;  4EWI A;  2YU0 A;  4I16 A;  4O7Q A;  3MOP A;  2LWD A;  3QF2 A;  4RHW A;  2D96 A;  2N83 A;  1Z6T A;  4N1J A;  1YGO A;  3CRD A;  2MS7 A;  4F42 A;  3EZQ A;  1NGR A;  2MJM A;  4LWD A;  1A1Z A;  2N00 A;  2HM2 Q;  4M9Z A;  4M9S A;  2XV9 A;  2A5Y B;  1CWW A;  1A1W A;  3MOP K;  1UCP A;  4O6X A;  3EZQ B;  2NSN A;  2VGQ A;  4P4H I;  2GF5 A;  2DBF A;  2L6A A;  2DBG A;  2LWE A;  4UZ0 A;  4A2Q A;  2N1F A;  2YQF A;  1WMG A;  2KN6 A;  1D2Z A;  1E3Y A;  3J6J A;  1CY5 A;  4M9X A;  4JUP A;  2F1S A;  4F44 A;  2LS7 A;  4NQK A;  1WH4 A;  2KM6 A;  3CL3 A;  2MN4 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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