The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
99
|
sequence length |
350
|
structure length |
330
|
Chain Sequence |
TQIIKIDPLNPEIDKIKIAADVIRNGGTVAFPTETVYGLGANAFDGNACLKIFQAKNRPVDNPLIVHIADFNQLFEVAKDIPDKVLEIAQIVWPGPLTFVLKKTERVPKEVTAGLDTVAVRMPAHPIALQLIRESGVPIAAPSANLATRPSPTKAEDVIVDLNGRVDVIIDGGHTFFGVESTIINVTVEPVLLRPGPFTIEELKKLFGEIVIYKHYAPNTRLLLVENRNIFKDVVSLLSKKYKVALLIPKELSKEFEGLQQIILGSDENLYEVARNLFDSFRELDKLNVDLGIMIGFPERGIGFAIMNRARKASGFSIIKAISDVYKYVN
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
| publication title |
The O-Carbamoyltransferase TobZ Catalyzes an Ancient Enzymatic Reaction.
pubmed doi rcsb |
| molecule tags |
Rna binding protein
|
| source organism |
Sulfolobus tokodaii
|
| molecule keywords |
YrdC/Sua5 family protein
|
| total genus |
99
|
| structure length |
330
|
| sequence length |
350
|
| ec nomenclature |
ec
2.7.7.87: L-threonylcarbamoyladenylate synthase. |
| pdb deposition date | 2012-03-06 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF01300 | Sua5_yciO_yrdC | Telomere recombination |
| A | PF03481 | SUA5 | Putative GTP-binding controlling metal-binding |
Image from the rcsb pdb (www.rcsb.org)
cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Rossmann fold | ||
| Alpha Beta | Alpha-Beta Complex | DHBP synthase | DHBP synthase |
