4E7EA

E. cloacae c115d mura in complex with udp-glucose
Total Genus 130
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
130
sequence length
419
structure length
418
Chain Sequence
MDKFRVQGPTRLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDIDTTMKLLTQLGTKVERGSVWIDASNVNNFSAPYDLVKTMRASIWALGPLVARFGQGQVSLPGGDAIGARPVDLHIFGLEKLGAEIKLEEGYVKASVNGRLKGAHIVMDKVSVGATVTIMSAATLAEGTTIIENAAREPEIVDTANFLVALGAKISGQGTDRITIEGVERLGGGVYRVLPDRIETGTFLVAAAISGGKIVCRNAQPDTLDAVLAKLREAGADIETGEDWISLDMHGKRPKAVTVRTAPHPAFPTDMQAQFTLLNLVAEGTGVITETIFENRFMHVPELIRMGAHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYERIEDKLRALGANIERVKGE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords UDP-N-acetylglucosamine 1-carboxyvinyltransferase
publication title Open-close transition of MurA
rcsb
source organism Enterobacter cloacae subsp. cloacae
total genus 130
structure length 418
sequence length 419
chains with identical sequence B, C, D
ec nomenclature ec 2.5.1.7: UDP-N-acetylglucosamine 1-carboxyvinyltransferase.
pdb deposition date 2012-03-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00275 EPSP_synthase EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 4e7eA02
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 4e7eA01
5BUFA 2GGAA 3SPBA 2GG4A 2PQ9A 3LTHA 3SU9A 5BQ2A 2YVWA 2GGDA 1RF5A 2AAYA 3V5VA 2Z2CA 4R7UA 4EIIA 2QFTA 1YBGA 4ZNDA 4N3PA 1P89A 3SLHA 1EJCA 2PQBA 2QFQA 1NAWA 3KQJA 3SWEA 3FJZA 1RF4A 1G6SA 1EYNA 4E7BA 3SWAA 1G6TA 2RL1A 3FJXA 1Q36A 3UPKA 4E7EA 3SWDA 3SWIA 3V4TA 4EGRA 3SWGA 1X8RA 4E7FA 5BS5A 1RYWA 3ISSA 2AA9A 2PQDA 4FQDA 1RF6A 3NVSA 3RMTA 2O0XA 2O0EA 3SWQA 3FK1A 5U4HA 3TR1A 1DLGA 3SG1A 2PQCA 3ZH3A 1Q3GA 1UAEA 2O15A 4E7CA 4E7GA 2QFSA 2O0DA 1EJDA 3KR6A 1X8TA 4E7DA 4GFPA 1P88A 3KQAA 2QFUA 2GG6A 2O0BA 2BJBA 3ZH4A 2O0ZA 3ROIA 1MI4A 3TI2A 3FK0A 2RL2A 1A2NA 3VCYA 3R38A
chains in the Genus database with same CATH superfamily
5BUFA 4CLQA 2GGAA 3SPBA 2GG4A 2PQ9A 3LTHA 3SU9A 5BQ2A 2YVWA 3TUTA 2GGDA 1QMHA 1RF5A 2AAYA 3V5VA 2Z2CA 4R7UA 4EIIA 2QFTA 1YBGA 4ZNDA 3PQVA 4N3PA 1P89A 3SLHA 3TV1A 1EJCA 2PQBA 2QFQA 1NAWA 3KQJA 3SWEA 3FJZA 1RF4A 1G6SA 1EYNA 4E7BA 3SWAA 1G6TA 2RL1A 3FJXA 1Q36A 3UPKA 4E7EA 3SWDA 3SWIA 3V4TA 4EGRA 3SWGA 1X8RA 4E7FA 5BS5A 1RYWA 3ISSA 1QMIA 2AA9A 2PQDA 4FQDA 1RF6A 3NVSA 3RMTA 2O0XA 2O0EA 3SWQA 3FK1A 5U4HA 3TR1A 1DLGA 3SG1A 3TW3A 2PQCA 3ZH3A 1Q3GA 1UAEA 2O15A 4E7CA 4E7GA 2QFSA 2O0DA 1EJDA 3KR6A 4O8JA 1X8TA 4E7DA 3TUXA 4GFPA 1P88A 4O89A 3KQAA 2QFUA 2GG6A 2O0BA 2BJBA 3ROIA 2O0ZA 3ZH4A 1MI4A 3TI2A 3FK0A 3KGDA 2RL2A 1A2NA 3VCYA 3R38A
chains in the Genus database with same CATH topology
5BUFA 2GGAA 3SPBA 2GG4A 2PQ9A 3LTHA 3SU9A 5BQ2A 2YVWA 2GGDA 1RF5A 2AAYA 3V5VA 2Z2CA 4R7UA 4EIIA 2QFTA 1YBGA 4ZNDA 4N3PA 1P89A 3SLHA 1EJCA 2PQBA 2QFQA 1NAWA 3KQJA 3SWEA 3FJZA 1RF4A 1G6SA 1EYNA 4E7BA 3SWAA 1G6TA 2RL1A 3FJXA 1Q36A 3UPKA 4E7EA 3SWDA 3SWIA 3V4TA 4EGRA 3SWGA 1X8RA 4E7FA 5BS5A 1RYWA 3ISSA 2AA9A 2PQDA 4FQDA 1RF6A 3NVSA 3RMTA 2O0XA 2O0EA 3SWQA 3FK1A 5U4HA 3TR1A 1DLGA 3SG1A 2PQCA 3ZH3A 1Q3GA 1UAEA 2O15A 4E7CA 4E7GA 2QFSA 2O0DA 1EJDA 3KR6A 1X8TA 4E7DA 4GFPA 1P88A 3KQAA 2QFUA 2GG6A 2O0BA 2BJBA 3ZH4A 2O0ZA 3ROIA 1MI4A 3TI2A 3FK0A 2RL2A 1A2NA 3VCYA 3R38A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5BUF A;  2GGA A;  3SPB A;  2GG4 A;  2PQ9 A;  3LTH A;  3SU9 A;  5BQ2 A;  2YVW A;  2GGD A;  1RF5 A;  2AAY A;  3V5V A;  2Z2C A;  4R7U A;  4EII A;  2QFT A;  1YBG A;  4ZND A;  4N3P A;  1P89 A;  3SLH A;  1EJC A;  2PQB A;  2QFQ A;  1NAW A;  3KQJ A;  3SWE A;  3FJZ A;  1RF4 A;  1G6S A;  1EYN A;  4E7B A;  3SWA A;  1G6T A;  2RL1 A;  3FJX A;  1Q36 A;  3UPK A;  4E7E A;  3SWD A;  3SWI A;  3V4T A;  4EGR A;  3SWG A;  1X8R A;  4E7F A;  5BS5 A;  1RYW A;  3ISS A;  2AA9 A;  2PQD A;  4FQD A;  1RF6 A;  3NVS A;  3RMT A;  2O0X A;  2O0E A;  3SWQ A;  3FK1 A;  5U4H A;  3TR1 A;  1DLG A;  3SG1 A;  2PQC A;  3ZH3 A;  1Q3G A;  1UAE A;  2O15 A;  4E7C A;  4E7G A;  2QFS A;  2O0D A;  1EJD A;  3KR6 A;  1X8T A;  4E7D A;  4GFP A;  1P88 A;  3KQA A;  2QFU A;  2GG6 A;  2O0B A;  2BJB A;  3ZH4 A;  2O0Z A;  3ROI A;  1MI4 A;  3TI2 A;  3FK0 A;  2RL2 A;  1A2N A;  3VCY A;  3R38 A; 
#chains in the Genus database with same CATH topology
 5BUF A;  4CLQ A;  2GGA A;  3SPB A;  2GG4 A;  2PQ9 A;  3LTH A;  3SU9 A;  5BQ2 A;  2YVW A;  3TUT A;  2GGD A;  1QMH A;  1RF5 A;  2AAY A;  3V5V A;  2Z2C A;  4R7U A;  4EII A;  2QFT A;  1YBG A;  4ZND A;  3PQV A;  4N3P A;  1P89 A;  3SLH A;  3TV1 A;  1EJC A;  2PQB A;  2QFQ A;  1NAW A;  3KQJ A;  3SWE A;  3FJZ A;  1RF4 A;  1G6S A;  1EYN A;  4E7B A;  3SWA A;  1G6T A;  2RL1 A;  3FJX A;  1Q36 A;  3UPK A;  4E7E A;  3SWD A;  3SWI A;  3V4T A;  4EGR A;  3SWG A;  1X8R A;  4E7F A;  5BS5 A;  1RYW A;  3ISS A;  1QMI A;  2AA9 A;  2PQD A;  4FQD A;  1RF6 A;  3NVS A;  3RMT A;  2O0X A;  2O0E A;  3SWQ A;  3FK1 A;  5U4H A;  3TR1 A;  1DLG A;  3SG1 A;  3TW3 A;  2PQC A;  3ZH3 A;  1Q3G A;  1UAE A;  2O15 A;  4E7C A;  4E7G A;  2QFS A;  2O0D A;  1EJD A;  3KR6 A;  4O8J A;  1X8T A;  4E7D A;  3TUX A;  4GFP A;  1P88 A;  4O89 A;  3KQA A;  2QFU A;  2GG6 A;  2O0B A;  2BJB A;  3ROI A;  2O0Z A;  3ZH4 A;  1MI4 A;  3TI2 A;  3FK0 A;  3KGD A;  2RL2 A;  1A2N A;  3VCY A;  3R38 A; 
#chains in the Genus database with same CATH homology
 5BUF A;  2GGA A;  3SPB A;  2GG4 A;  2PQ9 A;  3LTH A;  3SU9 A;  5BQ2 A;  2YVW A;  2GGD A;  1RF5 A;  2AAY A;  3V5V A;  2Z2C A;  4R7U A;  4EII A;  2QFT A;  1YBG A;  4ZND A;  4N3P A;  1P89 A;  3SLH A;  1EJC A;  2PQB A;  2QFQ A;  1NAW A;  3KQJ A;  3SWE A;  3FJZ A;  1RF4 A;  1G6S A;  1EYN A;  4E7B A;  3SWA A;  1G6T A;  2RL1 A;  3FJX A;  1Q36 A;  3UPK A;  4E7E A;  3SWD A;  3SWI A;  3V4T A;  4EGR A;  3SWG A;  1X8R A;  4E7F A;  5BS5 A;  1RYW A;  3ISS A;  2AA9 A;  2PQD A;  4FQD A;  1RF6 A;  3NVS A;  3RMT A;  2O0X A;  2O0E A;  3SWQ A;  3FK1 A;  5U4H A;  3TR1 A;  1DLG A;  3SG1 A;  2PQC A;  3ZH3 A;  1Q3G A;  1UAE A;  2O15 A;  4E7C A;  4E7G A;  2QFS A;  2O0D A;  1EJD A;  3KR6 A;  1X8T A;  4E7D A;  4GFP A;  1P88 A;  3KQA A;  2QFU A;  2GG6 A;  2O0B A;  2BJB A;  3ZH4 A;  2O0Z A;  3ROI A;  1MI4 A;  3TI2 A;  3FK0 A;  2RL2 A;  1A2N A;  3VCY A;  3R38 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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