4F5SA

Crystal structure of bovine serum albumin
Total Genus 222
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
222
sequence length
583
structure length
583
Chain Sequence
DTHKSEIAHRFKDLGEEHFKGLVLIAFSQYLQQCPFDEHVKLVNELTEFAKTCVADESHAGCEKSLHTLFGDELCKVASLRETYGDMADCCEKQEPERNECFLSHKDDSPDLPKLKPDPNTLCDEFKADEKKFWGKYLYEIARRHPYFYAPELLYYANKYNGVFQECCQAEDKGACLLPKIETMREKVLTSSARQRLRCASIQKFGERALKAWSVARLSQKFPKAEFVEVTKLVTDLTKVHKECCHGDLLECADDRADLAKYICDNQDTISSKLKECCDKPLLEKSHCIAEVEKDAIPENLPPLTADFAEDKDVCKNYQEAKDAFLGSFLYEYSRRHPEYAVSVLLRLAKEYEATLEECCAKDDPHACYSTVFDKLKHLVDEPQNLIKQNCDQFEKLGEYGFQNALIVRYTRKVPQVSTPTLVEVSRSLGKVGTRCCTKPESERMPCTEDYLSLILNRLCVLHEKTPVSEKVTKCCTESLVNRRPCFSALTPDETYVPKAFDEKLFTFHADICTLPDTEKQIKKQTALVELLKHKPKATEEQLKTVMENFVAFVDKCCAADDKEACFAVEGPKLVVSTQTALA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transport protein
molecule keywords Serum albumin
publication title Structures of bovine, equine and leporine serum albumin.
pubmed doi rcsb
total genus 222
structure length 583
sequence length 583
chains with identical sequence B
ec nomenclature
pdb deposition date 2012-05-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4f5sA03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4f5sA02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4f5sA04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4f5sA01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4f5sA06
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4f5sA05
1HK4A 5IIHA 4F5VA 2BXKA 5HOZA 5IFOA 4F5UA 3A73A 2BXNA 1UORA 5IJ5A 2BXMA 2XVUA 3B9LA 3SQJA 2BXDA 4HGKA 2BXCA 1H9ZA 1HK2A 2BXBA 1KXPD 4J2VA 4OR0A 3V03A 1AO6A 1HK5A 2BXOA 4JK4A 4LB2A 1BJ5A 4L9KA 2YDFA 4HGMB 1E7BA 1GNJA 5IJFA 2BXFA 2VDBA 1LOTA 3B9MA 4L8UA 2BXEA 4ZBQA 3JQZA 1E7HA 2BXHA 2XVVA 4E99A 1GNIA 2XW0A 3CX9A 4IW2A 4PO0A 4EMXA 1O9XA 4G03A 2XW1A 4Z69A 4L9QA 1HA2A 1J78A 3V08A 1E7CA 5GHKA 1MA9A 1BM0A 1E7FA 1HK1A 2BXPA 3JRYA 4K2CA 4LB9A 3V09A 5ID7A 2BXIA 4N0FD 1BKEA 3UIVA 4LUFA 5IIXA 5IIUA 4BKEA 4LUHA 1E7EA 1E7IA 5IJEA 1TF0A 4S1YA 5ID9A 4K71A 3LU8A 4F5TA 3LU6A 2I30A 2BXQA 1E7GA 2XVQA 1E7AA 4N0UD 2BXLA 1E78A 2BXAA 4G04A 2BXGA 2BX8A 2I2ZA 5DQFA 4F5SA 4OT2A 1HK3A 2VUFA 2XVWA 3LU7A 1KW2A 1N5UA 2VUEA 4LA0A 3TDLA 4IW1A 5DBYA 5FUOA 1J7EA 4ZBRA 2XSIA
chains in the Genus database with same CATH superfamily
1HK4A 5IIHA 1VZSA 3FWBC 3NMUA 4F5VA 3G9KD 2BXKA 5HOZA 5IFOA 4F5UA 3ECPA 4WA6B 3A73A 2QHBA 2BXNA 1UORA 3NVIA 2DYMA 4GDLB 5IJ5A 2BXMA 5GIOA 2DBUA 2XVUA 2EFEA 4ZUXV 3B9LA 3SQJA 1VFIA 2BXDA 4I9OA 4HGKA 5D7GA 4D7XA 1H5WA 2BXCA 2XMOA 3KJLA 1H9ZA 2CKXA 1LNSA 3FWCC 3VQIA 1HK2A 3WHRA 2BXBA 1KXPD 4J2VA 1MIYA 4OR0A 2LOQA 2EFHA 3V03A 3SIUB 1AO6A 1MUHA 2DYOA 3SIVB 2Z8KA 1HK5A 2BXOA 4JK4A 4LB2A 5B5TA 1BJ5A 4L9KA 2YDFA 3FNMA 4HGMB 2Z8JA 4C31B 1E7BA 1GNJA 2AJEA 4FJCB 4TQ0A 2BXFA 2VDBA 4FK5B 5IJFA 1LOTA 3NVMA 4GG2A 4FIPB 3B9MA 4L8UA 4Z9OA 2BXEA 4BY9C 3NVKA 4ZBQA 4DM0A 4M70B 4G01A 3GQXA 2EFDA 3GQUA 3JQZA 2E0XA 1E7HA 2BXHA 2NNWA 2XVVA 4E99A 1MM8A 1IJGA 5GINA 1GNIA 2XW0A 3CX9A 4IW2A 4PO0A 4EMXA 1NT2B 1O9XA 3W1SA 4ZBKA 4G03A 3PLAA 2XW1A 4OTUA 4Z69A 2DG5A 2KWFA 2OZBB 2GUTA 4L9QA 3WHQA 1HA2A 1J78A 2Z8IA 3V08A 1MIVA 1E7CA 1FOUA 1SB0A 5GHKA 1MA9A 3MHHB 1BM0A 1E7FA 4TQ1A 1HK1A 2BXPA 3JRYA 4K2CA 4LB9A 3V09A 3WHSA 2LQHA 5ID7A 2BXIA 5BPKA 2E0YA 4N0FD 1BKEA 3UIVA 2AGHB 4LUFA 3H3AA 5IIXA 5IIUA 4BKEA 4LUHA 2KBZA 2EFCA 3BPJA 3H37A 1E7EA 3GA9L 1E7IA 4DHXB 5IJEA 4GDXA 1TF0A 4S1YA 2LXSA 5ID9A 3ICXA 2ROHA 1MIWA 2OT3A 3KIKA 4K71A 5GIPA 3LU8A 4F5TA 1JNBA 3LU6A 2I30A 2NQOA 2QMCA 3MHSB 2BXQA 4MBEC 1E7GA 4GDKB 2XVQA 2QM6A 1E7AA 4N0UD 2BXLA 4NAWB 4ZC6A 2DBWA 1E78A 2JUHA 4N3ZA 2BXAA 2BXGA 4G04A 2BX8A 2I2ZA 2LXTA 2K0NA 5DQFA 4F5SA 4OT2A 1HK3A 2VUFA 2XVWA 3LU7A 1MUSA 1KW2A 3M99C 1N5UA 4ZCGA 1KDXA 1TXUA 2VUEA 4LA0A 3TDLA 4IW1A 5DBYA 5FUOA 4OTTA 1J7EA 2LQIA 2V36A 4ZBRA 4W4UB 2XSIA 2DBXA 3A75A
chains in the Genus database with same CATH topology
1HK4A 5IIHA 1VZSA 3FWBC 3NMUA 4F5VA 3G9KD 2BXKA 5HOZA 5IFOA 4F5UA 4WA6B 3A73A 2QHBA 2BXNA 1UORA 3NVIA 2DYMA 4GDLB 5IJ5A 2BXMA 5GIOA 2DBUA 2XVUA 2EFEA 4ZUXV 3B9LA 3SQJA 1VFIA 2BXDA 4HGKA 5D7GA 1H5WA 2BXCA 2XMOA 3KJLA 1H9ZA 2CKXA 1LNSA 3FWCC 3VQIA 1HK2A 3WHRA 2BXBA 1KXPD 4J2VA 1MIYA 4OR0A 2LOQA 2EFHA 3V03A 3SIUB 1AO6A 2DYOA 3SIVB 2Z8KA 1HK5A 2BXOA 4JK4A 4LB2A 5B5TA 1BJ5A 4L9KA 2YDFA 3FNMA 4HGMB 2Z8JA 4C31B 1E7BA 1GNJA 2AJEA 4FJCB 4TQ0A 2BXFA 2VDBA 4FK5B 5IJFA 1LOTA 3NVMA 4GG2A 4FIPB 3B9MA 4L8UA 4Z9OA 2BXEA 4BY9C 3NVKA 4ZBQA 4M70B 4G01A 3GQXA 2EFDA 3GQUA 3JQZA 2E0XA 1E7HA 2BXHA 2NNWA 2XVVA 4E99A 1IJGA 5GINA 1GNIA 2XW0A 3CX9A 4IW2A 4PO0A 4EMXA 1NT2B 1O9XA 3W1SA 4ZBKA 4G03A 3PLAA 2XW1A 4OTUA 4Z69A 2DG5A 2OZBB 4L9QA 3WHQA 1HA2A 1J78A 2Z8IA 3V08A 1MIVA 1E7CA 1FOUA 5GHKA 1MA9A 3MHHB 1BM0A 1E7FA 4TQ1A 1HK1A 2BXPA 3JRYA 4K2CA 4LB9A 3V09A 3WHSA 5ID7A 2BXIA 5BPKA 2E0YA 4N0FD 1BKEA 3UIVA 4LUFA 3H3AA 5IIXA 5IIUA 4BKEA 4LUHA 2KBZA 2EFCA 3H37A 1E7EA 3GA9L 1E7IA 4DHXB 5IJEA 4GDXA 1TF0A 4S1YA 5ID9A 3ICXA 2ROHA 1MIWA 2OT3A 3KIKA 4K71A 5GIPA 3LU8A 4F5TA 1JNBA 3LU6A 2I30A 2NQOA 2QMCA 3MHSB 2BXQA 4MBEC 1E7GA 4GDKB 2XVQA 2QM6A 1E7AA 4N0UD 2BXLA 4NAWB 4ZC6A 2DBWA 1E78A 2JUHA 4N3ZA 2BXAA 2BXGA 4G04A 2BX8A 2I2ZA 5DQFA 4F5SA 4OT2A 1HK3A 2VUFA 2XVWA 3LU7A 1KW2A 3M99C 1N5UA 4ZCGA 1TXUA 2VUEA 4LA0A 3TDLA 4IW1A 5DBYA 5FUOA 4OTTA 1J7EA 2V36A 4ZBRA 4W4UB 2XSIA 2DBXA 3A75A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1HK4 A;  5IIH A;  4F5V A;  2BXK A;  5HOZ A;  5IFO A;  4F5U A;  3A73 A;  2BXN A;  1UOR A;  5IJ5 A;  2BXM A;  2XVU A;  3B9L A;  3SQJ A;  2BXD A;  4HGK A;  2BXC A;  1H9Z A;  1HK2 A;  2BXB A;  1KXP D;  4J2V A;  4OR0 A;  3V03 A;  1AO6 A;  1HK5 A;  2BXO A;  4JK4 A;  4LB2 A;  1BJ5 A;  4L9K A;  2YDF A;  4HGM B;  1E7B A;  1GNJ A;  5IJF A;  2BXF A;  2VDB A;  1LOT A;  3B9M A;  4L8U A;  2BXE A;  4ZBQ A;  3JQZ A;  1E7H A;  2BXH A;  2XVV A;  4E99 A;  1GNI A;  2XW0 A;  3CX9 A;  4IW2 A;  4PO0 A;  4EMX A;  1O9X A;  4G03 A;  2XW1 A;  4Z69 A;  4L9Q A;  1HA2 A;  1J78 A;  3V08 A;  1E7C A;  5GHK A;  1MA9 A;  1BM0 A;  1E7F A;  1HK1 A;  2BXP A;  3JRY A;  4K2C A;  4LB9 A;  3V09 A;  5ID7 A;  2BXI A;  4N0F D;  1BKE A;  3UIV A;  4LUF A;  5IIX A;  5IIU A;  4BKE A;  4LUH A;  1E7E A;  1E7I A;  5IJE A;  1TF0 A;  4S1Y A;  5ID9 A;  4K71 A;  3LU8 A;  4F5T A;  3LU6 A;  2I30 A;  2BXQ A;  1E7G A;  2XVQ A;  1E7A A;  4N0U D;  2BXL A;  1E78 A;  2BXA A;  4G04 A;  2BXG A;  2BX8 A;  2I2Z A;  5DQF A;  4F5S A;  4OT2 A;  1HK3 A;  2VUF A;  2XVW A;  3LU7 A;  1KW2 A;  1N5U A;  2VUE A;  4LA0 A;  3TDL A;  4IW1 A;  5DBY A;  5FUO A;  1J7E A;  4ZBR A;  2XSI A; 
#chains in the Genus database with same CATH topology
 1HK4 A;  5IIH A;  1VZS A;  3FWB C;  3NMU A;  4F5V A;  3G9K D;  2BXK A;  5HOZ A;  5IFO A;  4F5U A;  3ECP A;  4WA6 B;  3A73 A;  2QHB A;  2BXN A;  1UOR A;  3NVI A;  2DYM A;  4GDL B;  5IJ5 A;  2BXM A;  5GIO A;  2DBU A;  2XVU A;  2EFE A;  4ZUX V;  3B9L A;  3SQJ A;  1VFI A;  2BXD A;  4I9O A;  4HGK A;  5D7G A;  4D7X A;  1H5W A;  2BXC A;  2XMO A;  3KJL A;  1H9Z A;  2CKX A;  1LNS A;  3FWC C;  3VQI A;  1HK2 A;  3WHR A;  2BXB A;  1KXP D;  4J2V A;  1MIY A;  4OR0 A;  2LOQ A;  2EFH A;  3V03 A;  3SIU B;  1AO6 A;  1MUH A;  2DYO A;  3SIV B;  2Z8K A;  1HK5 A;  2BXO A;  4JK4 A;  4LB2 A;  5B5T A;  1BJ5 A;  4L9K A;  2YDF A;  3FNM A;  4HGM B;  2Z8J A;  4C31 B;  1E7B A;  1GNJ A;  2AJE A;  4FJC B;  4TQ0 A;  2BXF A;  2VDB A;  4FK5 B;  5IJF A;  1LOT A;  3NVM A;  4GG2 A;  4FIP B;  3B9M A;  4L8U A;  4Z9O A;  2BXE A;  4BY9 C;  3NVK A;  4ZBQ A;  4DM0 A;  4M70 B;  4G01 A;  3GQX A;  2EFD A;  3GQU A;  3JQZ A;  2E0X A;  1E7H A;  2BXH A;  2NNW A;  2XVV A;  4E99 A;  1MM8 A;  1IJG A;  5GIN A;  1GNI A;  2XW0 A;  3CX9 A;  4IW2 A;  4PO0 A;  4EMX A;  1NT2 B;  1O9X A;  3W1S A;  4ZBK A;  4G03 A;  3PLA A;  2XW1 A;  4OTU A;  4Z69 A;  2DG5 A;  2KWF A;  2OZB B;  2GUT A;  4L9Q A;  3WHQ A;  1HA2 A;  1J78 A;  2Z8I A;  3V08 A;  1MIV A;  1E7C A;  1FOU A;  1SB0 A;  5GHK A;  1MA9 A;  3MHH B;  1BM0 A;  1E7F A;  4TQ1 A;  1HK1 A;  2BXP A;  3JRY A;  4K2C A;  4LB9 A;  3V09 A;  3WHS A;  2LQH A;  5ID7 A;  2BXI A;  5BPK A;  2E0Y A;  4N0F D;  1BKE A;  3UIV A;  2AGH B;  4LUF A;  3H3A A;  5IIX A;  5IIU A;  4BKE A;  4LUH A;  2KBZ A;  2EFC A;  3BPJ A;  3H37 A;  1E7E A;  3GA9 L;  1E7I A;  4DHX B;  5IJE A;  4GDX A;  1TF0 A;  4S1Y A;  2LXS A;  5ID9 A;  3ICX A;  2ROH A;  1MIW A;  2OT3 A;  3KIK A;  4K71 A;  5GIP A;  3LU8 A;  4F5T A;  1JNB A;  3LU6 A;  2I30 A;  2NQO A;  2QMC A;  3MHS B;  2BXQ A;  4MBE C;  1E7G A;  4GDK B;  2XVQ A;  2QM6 A;  1E7A A;  4N0U D;  2BXL A;  4NAW B;  4ZC6 A;  2DBW A;  1E78 A;  2JUH A;  4N3Z A;  2BXA A;  2BXG A;  4G04 A;  2BX8 A;  2I2Z A;  2LXT A;  2K0N A;  5DQF A;  4F5S A;  4OT2 A;  1HK3 A;  2VUF A;  2XVW A;  3LU7 A;  1MUS A;  1KW2 A;  3M99 C;  1N5U A;  4ZCG A;  1KDX A;  1TXU A;  2VUE A;  4LA0 A;  3TDL A;  4IW1 A;  5DBY A;  5FUO A;  4OTT A;  1J7E A;  2LQI A;  2V36 A;  4ZBR A;  4W4U B;  2XSI A;  2DBX A;  3A75 A; 
#chains in the Genus database with same CATH homology
 1HK4 A;  5IIH A;  1VZS A;  3FWB C;  3NMU A;  4F5V A;  3G9K D;  2BXK A;  5HOZ A;  5IFO A;  4F5U A;  4WA6 B;  3A73 A;  2QHB A;  2BXN A;  1UOR A;  3NVI A;  2DYM A;  4GDL B;  5IJ5 A;  2BXM A;  5GIO A;  2DBU A;  2XVU A;  2EFE A;  4ZUX V;  3B9L A;  3SQJ A;  1VFI A;  2BXD A;  4HGK A;  5D7G A;  1H5W A;  2BXC A;  2XMO A;  3KJL A;  1H9Z A;  2CKX A;  1LNS A;  3FWC C;  3VQI A;  1HK2 A;  3WHR A;  2BXB A;  1KXP D;  4J2V A;  1MIY A;  4OR0 A;  2LOQ A;  2EFH A;  3V03 A;  3SIU B;  1AO6 A;  2DYO A;  3SIV B;  2Z8K A;  1HK5 A;  2BXO A;  4JK4 A;  4LB2 A;  5B5T A;  1BJ5 A;  4L9K A;  2YDF A;  3FNM A;  4HGM B;  2Z8J A;  4C31 B;  1E7B A;  1GNJ A;  2AJE A;  4FJC B;  4TQ0 A;  2BXF A;  2VDB A;  4FK5 B;  5IJF A;  1LOT A;  3NVM A;  4GG2 A;  4FIP B;  3B9M A;  4L8U A;  4Z9O A;  2BXE A;  4BY9 C;  3NVK A;  4ZBQ A;  4M70 B;  4G01 A;  3GQX A;  2EFD A;  3GQU A;  3JQZ A;  2E0X A;  1E7H A;  2BXH A;  2NNW A;  2XVV A;  4E99 A;  1IJG A;  5GIN A;  1GNI A;  2XW0 A;  3CX9 A;  4IW2 A;  4PO0 A;  4EMX A;  1NT2 B;  1O9X A;  3W1S A;  4ZBK A;  4G03 A;  3PLA A;  2XW1 A;  4OTU A;  4Z69 A;  2DG5 A;  2OZB B;  4L9Q A;  3WHQ A;  1HA2 A;  1J78 A;  2Z8I A;  3V08 A;  1MIV A;  1E7C A;  1FOU A;  5GHK A;  1MA9 A;  3MHH B;  1BM0 A;  1E7F A;  4TQ1 A;  1HK1 A;  2BXP A;  3JRY A;  4K2C A;  4LB9 A;  3V09 A;  3WHS A;  5ID7 A;  2BXI A;  5BPK A;  2E0Y A;  4N0F D;  1BKE A;  3UIV A;  4LUF A;  3H3A A;  5IIX A;  5IIU A;  4BKE A;  4LUH A;  2KBZ A;  2EFC A;  3H37 A;  1E7E A;  3GA9 L;  1E7I A;  4DHX B;  5IJE A;  4GDX A;  1TF0 A;  4S1Y A;  5ID9 A;  3ICX A;  2ROH A;  1MIW A;  2OT3 A;  3KIK A;  4K71 A;  5GIP A;  3LU8 A;  4F5T A;  1JNB A;  3LU6 A;  2I30 A;  2NQO A;  2QMC A;  3MHS B;  2BXQ A;  4MBE C;  1E7G A;  4GDK B;  2XVQ A;  2QM6 A;  1E7A A;  4N0U D;  2BXL A;  4NAW B;  4ZC6 A;  2DBW A;  1E78 A;  2JUH A;  4N3Z A;  2BXA A;  2BXG A;  4G04 A;  2BX8 A;  2I2Z A;  5DQF A;  4F5S A;  4OT2 A;  1HK3 A;  2VUF A;  2XVW A;  3LU7 A;  1KW2 A;  3M99 C;  1N5U A;  4ZCG A;  1TXU A;  2VUE A;  4LA0 A;  3TDL A;  4IW1 A;  5DBY A;  5FUO A;  4OTT A;  1J7E A;  2V36 A;  4ZBR A;  4W4U B;  2XSI A;  2DBX A;  3A75 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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