4F5SA

Crystal structure of bovine serum albumin
Total Genus 222
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
222
sequence length
583
structure length
583
Chain Sequence
DTHKSEIAHRFKDLGEEHFKGLVLIAFSQYLQQCPFDEHVKLVNELTEFAKTCVADESHAGCEKSLHTLFGDELCKVASLRETYGDMADCCEKQEPERNECFLSHKDDSPDLPKLKPDPNTLCDEFKADEKKFWGKYLYEIARRHPYFYAPELLYYANKYNGVFQECCQAEDKGACLLPKIETMREKVLTSSARQRLRCASIQKFGERALKAWSVARLSQKFPKAEFVEVTKLVTDLTKVHKECCHGDLLECADDRADLAKYICDNQDTISSKLKECCDKPLLEKSHCIAEVEKDAIPENLPPLTADFAEDKDVCKNYQEAKDAFLGSFLYEYSRRHPEYAVSVLLRLAKEYEATLEECCAKDDPHACYSTVFDKLKHLVDEPQNLIKQNCDQFEKLGEYGFQNALIVRYTRKVPQVSTPTLVEVSRSLGKVGTRCCTKPESERMPCTEDYLSLILNRLCVLHEKTPVSEKVTKCCTESLVNRRPCFSALTPDETYVPKAFDEKLFTFHADICTLPDTEKQIKKQTALVELLKHKPKATEEQLKTVMENFVAFVDKCCAADDKEACFAVEGPKLVVSTQTALA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Serum albumin
publication title Structures of bovine, equine and leporine serum albumin.
pubmed doi rcsb
molecule tags Transport protein
total genus 222
structure length 583
sequence length 583
chains with identical sequence B
ec nomenclature
pdb deposition date 2012-05-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4f5sA03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4f5sA02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4f5sA04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4f5sA01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4f5sA06
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4f5sA05
4BKEA 1GNJA 2BXNA 2XW1A 5HOZA 5IJFA 1E78A 2BXHA 1E7FA 2BXGA 3LU7A 5FUOA 4F5UA 3B9LA 1J7EA 4G04A 2VUFA 5DBYA 3V08A 2BXCA 2BX8A 1KW2A 3B9MA 2I30A 4ZBQA 1GNIA 3A73A 4OT2A 2BXQA 1HK3A 4LB2A 3JQZA 2XSIA 1BKEA 5GHKA 5ID7A 4F5TA 4EMXA 1HK5A 2BXMA 4LA0A 3LU8A 2XVWA 1N5UA 4N0FD 2BXPA 2BXAA 2XW0A 4JK4A 4K71A 1E7EA 4F5VA 1J78A 3V09A 2XVQA 1BM0A 4G03A 3SQJA 1E7GA 1E7AA 5IJEA 2BXDA 1E7CA 5IIXA 2BXFA 4L8UA 1TF0A 3LU6A 4LB9A 1BJ5A 2BXBA 2BXEA 4K2CA 4HGMB 4F5SA 1HA2A 4S1YA 4IW2A 5IJ5A 1AO6A 4L9QA 2VDBA 5ID9A 3TDLA 2YDFA 4HGKA 1E7IA 3UIVA 5DQFA 4N0UD 1UORA 4ZBRA 4LUFA 4IW1A 4PO0A 5IIHA 2I2ZA 2BXLA 1KXPD 4OR0A 1O9XA 1LOTA 4Z69A 5IIUA 1H9ZA 2XVUA 4L9KA 1HK2A 4J2VA 3JRYA 1HK1A 3V03A 2BXKA 2BXIA 5IFOA 2XVVA 4E99A 1E7HA 3CX9A 2VUEA 1HK4A 1MA9A 1E7BA 4LUHA 2BXOA
chains in the Genus database with same CATH superfamily
4BKEA 2DYMA 2LQHA 5BPKA 1GNJA 1MM8A 2Z8JA 2K0NA 3KIKA 2BXNA 2XW1A 1FOUA 2E0YA 5HOZA 5IJFA 5D7GA 4GDXA 1E78A 2BXHA 1E7FA 3NVMA 2BXGA 2DBWA 3LU7A 5GIOA 3M99C 4BY9C 5FUOA 4F5UA 4OTTA 3B9LA 3MHHB 1J7EA 2NNWA 3GQUA 4G04A 2VUFA 5DBYA 4N3ZA 3V08A 2OZBB 2BXCA 2BX8A 2ROHA 1KW2A 2LXSA 2QM6A 3B9MA 1NT2B 3ICXA 2I30A 4ZBQA 1GNIA 2DBUA 3A73A 1TXUA 2BXQA 1HK3A 4LB2A 4OT2A 2EFDA 3BPJA 3ECPA 1MIYA 3FWCC 3JQZA 2XSIA 1BKEA 5GHKA 5ID7A 3H3AA 1KDXA 4F5TA 4EMXA 1HK5A 1IJGA 3H37A 2BXMA 4LA0A 3LU8A 2XVWA 1N5UA 4N0FD 2GUTA 4DHXB 2KBZA 2BXPA 2V36A 2Z8IA 3SIVB 2BXAA 2XW0A 4JK4A 4K71A 1E7EA 3SIUB 3GA9L 4F5VA 1J78A 4I9OA 2EFEA 2XVQA 3V09A 4D7XA 1BM0A 4TQ0A 4G03A 3SQJA 1MUHA 3WHRA 1E7GA 1E7AA 2EFHA 5IJEA 2BXDA 2LOQA 2EFCA 1LNSA 2QHBA 1E7CA 5IIXA 2BXFA 4L8UA 2AGHB 1TF0A 4GG2A 3LU6A 2Z8KA 4LB9A 1BJ5A 2BXBA 2BXEA 4K2CA 4HGMB 4F5SA 4C31B 1HA2A 5GIPA 4S1YA 4IW2A 3KJLA 4FK5B 4Z9OA 5IJ5A 1AO6A 2OT3A 4ZUXV 1SB0A 2CKXA 4FIPB 1H5WA 4L9QA 2DG5A 2NQOA 2VDBA 3VQIA 2XMOA 5ID9A 4WA6B 2DYOA 3TDLA 3WHQA 2AJEA 2YDFA 4HGKA 4ZCGA 3PLAA 1E7IA 3UIVA 5DQFA 5B5TA 4N0UD 3NMUA 1UORA 4ZBRA 4LUFA 4IW1A 4PO0A 3NVKA 4GDKB 2I2ZA 2BXLA 3FWBC 5IIHA 1VFIA 1JNBA 1KXPD 4OR0A 2JUHA 2E0XA 1O9XA 3A75A 4OTUA 1LOTA 3NVIA 2LXTA 4NAWB 4ZC6A 4Z69A 3WHSA 5IIUA 4DM0A 1H9ZA 1MIWA 1MUSA 1VZSA 2XVUA 2QMCA 4MBEC 4ZBKA 4L9KA 1HK2A 3FNMA 3JRYA 1HK1A 4J2VA 2LQIA 3MHSB 4W4UB 4FJCB 3V03A 2BXKA 2BXIA 4GDLB 5IFOA 2XVVA 1MIVA 4TQ1A 4E99A 3W1SA 2KWFA 1E7HA 2DBXA 3CX9A 2VUEA 1HK4A 1MA9A 3G9KD 1E7BA 5GINA 4M70B 4LUHA 3GQXA 4G01A 2BXOA
chains in the Genus database with same CATH topology
4BKEA 2DYMA 5BPKA 1GNJA 2Z8JA 3KIKA 2BXNA 2XW1A 1FOUA 2E0YA 5HOZA 5IJFA 5D7GA 4GDXA 1E78A 2BXHA 1E7FA 3NVMA 2BXGA 2DBWA 3LU7A 5GIOA 3M99C 4BY9C 5FUOA 4F5UA 4OTTA 3B9LA 3MHHB 1J7EA 2NNWA 3GQUA 4G04A 2VUFA 5DBYA 4N3ZA 3V08A 2OZBB 2BXCA 2BX8A 2ROHA 1KW2A 2QM6A 3B9MA 1NT2B 3ICXA 2I30A 4ZBQA 1GNIA 2DBUA 3A73A 1TXUA 2BXQA 1HK3A 4LB2A 4OT2A 2EFDA 1MIYA 3FWCC 3JQZA 2XSIA 1BKEA 5GHKA 5ID7A 3H3AA 4F5TA 4EMXA 1HK5A 1IJGA 3H37A 2BXMA 4LA0A 3LU8A 2XVWA 1N5UA 4N0FD 4DHXB 2KBZA 2BXPA 2V36A 2Z8IA 3SIVB 2BXAA 2XW0A 4JK4A 4K71A 1E7EA 3SIUB 3GA9L 4F5VA 1J78A 2EFEA 2XVQA 3V09A 1BM0A 4TQ0A 4G03A 3SQJA 3WHRA 1E7GA 1E7AA 2EFHA 5IJEA 2BXDA 2LOQA 2EFCA 1LNSA 2QHBA 1E7CA 5IIXA 2BXFA 4L8UA 1TF0A 4GG2A 3LU6A 2Z8KA 4LB9A 1BJ5A 2BXBA 2BXEA 4K2CA 4HGMB 4F5SA 4C31B 1HA2A 5GIPA 4S1YA 4IW2A 3KJLA 4FK5B 4Z9OA 5IJ5A 1AO6A 2OT3A 4ZUXV 2CKXA 4FIPB 1H5WA 4L9QA 2DG5A 2NQOA 2VDBA 3VQIA 2XMOA 5ID9A 4WA6B 2DYOA 3TDLA 3WHQA 2AJEA 2YDFA 4HGKA 4ZCGA 3PLAA 1E7IA 3UIVA 5DQFA 5B5TA 4N0UD 3NMUA 1UORA 4ZBRA 4LUFA 4IW1A 4PO0A 3NVKA 4GDKB 2I2ZA 2BXLA 3FWBC 5IIHA 1VFIA 1JNBA 1KXPD 4OR0A 2JUHA 2E0XA 1O9XA 3A75A 4OTUA 1LOTA 3NVIA 4NAWB 4ZC6A 4Z69A 3WHSA 5IIUA 1H9ZA 1MIWA 1VZSA 2XVUA 2QMCA 4MBEC 4ZBKA 4L9KA 1HK2A 3FNMA 3JRYA 1HK1A 4J2VA 3MHSB 4W4UB 4FJCB 3V03A 2BXKA 2BXIA 4GDLB 5IFOA 2XVVA 1MIVA 4TQ1A 4E99A 3W1SA 1E7HA 2DBXA 3CX9A 2VUEA 1HK4A 1MA9A 3G9KD 1E7BA 5GINA 4M70B 4LUHA 3GQXA 4G01A 2BXOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4BKE A;  1GNJ A;  2BXN A;  2XW1 A;  5HOZ A;  5IJF A;  1E78 A;  2BXH A;  1E7F A;  2BXG A;  3LU7 A;  5FUO A;  4F5U A;  3B9L A;  1J7E A;  4G04 A;  2VUF A;  5DBY A;  3V08 A;  2BXC A;  2BX8 A;  1KW2 A;  3B9M A;  2I30 A;  4ZBQ A;  1GNI A;  3A73 A;  4OT2 A;  2BXQ A;  1HK3 A;  4LB2 A;  3JQZ A;  2XSI A;  1BKE A;  5GHK A;  5ID7 A;  4F5T A;  4EMX A;  1HK5 A;  2BXM A;  4LA0 A;  3LU8 A;  2XVW A;  1N5U A;  4N0F D;  2BXP A;  2BXA A;  2XW0 A;  4JK4 A;  4K71 A;  1E7E A;  4F5V A;  1J78 A;  3V09 A;  2XVQ A;  1BM0 A;  4G03 A;  3SQJ A;  1E7G A;  1E7A A;  5IJE A;  2BXD A;  1E7C A;  5IIX A;  2BXF A;  4L8U A;  1TF0 A;  3LU6 A;  4LB9 A;  1BJ5 A;  2BXB A;  2BXE A;  4K2C A;  4HGM B;  4F5S A;  1HA2 A;  4S1Y A;  4IW2 A;  5IJ5 A;  1AO6 A;  4L9Q A;  2VDB A;  5ID9 A;  3TDL A;  2YDF A;  4HGK A;  1E7I A;  3UIV A;  5DQF A;  4N0U D;  1UOR A;  4ZBR A;  4LUF A;  4IW1 A;  4PO0 A;  5IIH A;  2I2Z A;  2BXL A;  1KXP D;  4OR0 A;  1O9X A;  1LOT A;  4Z69 A;  5IIU A;  1H9Z A;  2XVU A;  4L9K A;  1HK2 A;  4J2V A;  3JRY A;  1HK1 A;  3V03 A;  2BXK A;  2BXI A;  5IFO A;  2XVV A;  4E99 A;  1E7H A;  3CX9 A;  2VUE A;  1HK4 A;  1MA9 A;  1E7B A;  4LUH A;  2BXO A; 
#chains in the Genus database with same CATH topology
 4BKE A;  2DYM A;  2LQH A;  5BPK A;  1GNJ A;  1MM8 A;  2Z8J A;  2K0N A;  3KIK A;  2BXN A;  2XW1 A;  1FOU A;  2E0Y A;  5HOZ A;  5IJF A;  5D7G A;  4GDX A;  1E78 A;  2BXH A;  1E7F A;  3NVM A;  2BXG A;  2DBW A;  3LU7 A;  5GIO A;  3M99 C;  4BY9 C;  5FUO A;  4F5U A;  4OTT A;  3B9L A;  3MHH B;  1J7E A;  2NNW A;  3GQU A;  4G04 A;  2VUF A;  5DBY A;  4N3Z A;  3V08 A;  2OZB B;  2BXC A;  2BX8 A;  2ROH A;  1KW2 A;  2LXS A;  2QM6 A;  3B9M A;  1NT2 B;  3ICX A;  2I30 A;  4ZBQ A;  1GNI A;  2DBU A;  3A73 A;  1TXU A;  2BXQ A;  1HK3 A;  4LB2 A;  4OT2 A;  2EFD A;  3BPJ A;  3ECP A;  1MIY A;  3FWC C;  3JQZ A;  2XSI A;  1BKE A;  5GHK A;  5ID7 A;  3H3A A;  1KDX A;  4F5T A;  4EMX A;  1HK5 A;  1IJG A;  3H37 A;  2BXM A;  4LA0 A;  3LU8 A;  2XVW A;  1N5U A;  4N0F D;  2GUT A;  4DHX B;  2KBZ A;  2BXP A;  2V36 A;  2Z8I A;  3SIV B;  2BXA A;  2XW0 A;  4JK4 A;  4K71 A;  1E7E A;  3SIU B;  3GA9 L;  4F5V A;  1J78 A;  4I9O A;  2EFE A;  2XVQ A;  3V09 A;  4D7X A;  1BM0 A;  4TQ0 A;  4G03 A;  3SQJ A;  1MUH A;  3WHR A;  1E7G A;  1E7A A;  2EFH A;  5IJE A;  2BXD A;  2LOQ A;  2EFC A;  1LNS A;  2QHB A;  1E7C A;  5IIX A;  2BXF A;  4L8U A;  2AGH B;  1TF0 A;  4GG2 A;  3LU6 A;  2Z8K A;  4LB9 A;  1BJ5 A;  2BXB A;  2BXE A;  4K2C A;  4HGM B;  4F5S A;  4C31 B;  1HA2 A;  5GIP A;  4S1Y A;  4IW2 A;  3KJL A;  4FK5 B;  4Z9O A;  5IJ5 A;  1AO6 A;  2OT3 A;  4ZUX V;  1SB0 A;  2CKX A;  4FIP B;  1H5W A;  4L9Q A;  2DG5 A;  2NQO A;  2VDB A;  3VQI A;  2XMO A;  5ID9 A;  4WA6 B;  2DYO A;  3TDL A;  3WHQ A;  2AJE A;  2YDF A;  4HGK A;  4ZCG A;  3PLA A;  1E7I A;  3UIV A;  5DQF A;  5B5T A;  4N0U D;  3NMU A;  1UOR A;  4ZBR A;  4LUF A;  4IW1 A;  4PO0 A;  3NVK A;  4GDK B;  2I2Z A;  2BXL A;  3FWB C;  5IIH A;  1VFI A;  1JNB A;  1KXP D;  4OR0 A;  2JUH A;  2E0X A;  1O9X A;  3A75 A;  4OTU A;  1LOT A;  3NVI A;  2LXT A;  4NAW B;  4ZC6 A;  4Z69 A;  3WHS A;  5IIU A;  4DM0 A;  1H9Z A;  1MIW A;  1MUS A;  1VZS A;  2XVU A;  2QMC A;  4MBE C;  4ZBK A;  4L9K A;  1HK2 A;  3FNM A;  3JRY A;  1HK1 A;  4J2V A;  2LQI A;  3MHS B;  4W4U B;  4FJC B;  3V03 A;  2BXK A;  2BXI A;  4GDL B;  5IFO A;  2XVV A;  1MIV A;  4TQ1 A;  4E99 A;  3W1S A;  2KWF A;  1E7H A;  2DBX A;  3CX9 A;  2VUE A;  1HK4 A;  1MA9 A;  3G9K D;  1E7B A;  5GIN A;  4M70 B;  4LUH A;  3GQX A;  4G01 A;  2BXO A; 
#chains in the Genus database with same CATH homology
 4BKE A;  2DYM A;  5BPK A;  1GNJ A;  2Z8J A;  3KIK A;  2BXN A;  2XW1 A;  1FOU A;  2E0Y A;  5HOZ A;  5IJF A;  5D7G A;  4GDX A;  1E78 A;  2BXH A;  1E7F A;  3NVM A;  2BXG A;  2DBW A;  3LU7 A;  5GIO A;  3M99 C;  4BY9 C;  5FUO A;  4F5U A;  4OTT A;  3B9L A;  3MHH B;  1J7E A;  2NNW A;  3GQU A;  4G04 A;  2VUF A;  5DBY A;  4N3Z A;  3V08 A;  2OZB B;  2BXC A;  2BX8 A;  2ROH A;  1KW2 A;  2QM6 A;  3B9M A;  1NT2 B;  3ICX A;  2I30 A;  4ZBQ A;  1GNI A;  2DBU A;  3A73 A;  1TXU A;  2BXQ A;  1HK3 A;  4LB2 A;  4OT2 A;  2EFD A;  1MIY A;  3FWC C;  3JQZ A;  2XSI A;  1BKE A;  5GHK A;  5ID7 A;  3H3A A;  4F5T A;  4EMX A;  1HK5 A;  1IJG A;  3H37 A;  2BXM A;  4LA0 A;  3LU8 A;  2XVW A;  1N5U A;  4N0F D;  4DHX B;  2KBZ A;  2BXP A;  2V36 A;  2Z8I A;  3SIV B;  2BXA A;  2XW0 A;  4JK4 A;  4K71 A;  1E7E A;  3SIU B;  3GA9 L;  4F5V A;  1J78 A;  2EFE A;  2XVQ A;  3V09 A;  1BM0 A;  4TQ0 A;  4G03 A;  3SQJ A;  3WHR A;  1E7G A;  1E7A A;  2EFH A;  5IJE A;  2BXD A;  2LOQ A;  2EFC A;  1LNS A;  2QHB A;  1E7C A;  5IIX A;  2BXF A;  4L8U A;  1TF0 A;  4GG2 A;  3LU6 A;  2Z8K A;  4LB9 A;  1BJ5 A;  2BXB A;  2BXE A;  4K2C A;  4HGM B;  4F5S A;  4C31 B;  1HA2 A;  5GIP A;  4S1Y A;  4IW2 A;  3KJL A;  4FK5 B;  4Z9O A;  5IJ5 A;  1AO6 A;  2OT3 A;  4ZUX V;  2CKX A;  4FIP B;  1H5W A;  4L9Q A;  2DG5 A;  2NQO A;  2VDB A;  3VQI A;  2XMO A;  5ID9 A;  4WA6 B;  2DYO A;  3TDL A;  3WHQ A;  2AJE A;  2YDF A;  4HGK A;  4ZCG A;  3PLA A;  1E7I A;  3UIV A;  5DQF A;  5B5T A;  4N0U D;  3NMU A;  1UOR A;  4ZBR A;  4LUF A;  4IW1 A;  4PO0 A;  3NVK A;  4GDK B;  2I2Z A;  2BXL A;  3FWB C;  5IIH A;  1VFI A;  1JNB A;  1KXP D;  4OR0 A;  2JUH A;  2E0X A;  1O9X A;  3A75 A;  4OTU A;  1LOT A;  3NVI A;  4NAW B;  4ZC6 A;  4Z69 A;  3WHS A;  5IIU A;  1H9Z A;  1MIW A;  1VZS A;  2XVU A;  2QMC A;  4MBE C;  4ZBK A;  4L9K A;  1HK2 A;  3FNM A;  3JRY A;  1HK1 A;  4J2V A;  3MHS B;  4W4U B;  4FJC B;  3V03 A;  2BXK A;  2BXI A;  4GDL B;  5IFO A;  2XVV A;  1MIV A;  4TQ1 A;  4E99 A;  3W1S A;  1E7H A;  2DBX A;  3CX9 A;  2VUE A;  1HK4 A;  1MA9 A;  3G9K D;  1E7B A;  5GIN A;  4M70 B;  4LUH A;  3GQX A;  4G01 A;  2BXO A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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