4FANC

Crystal structure of wt maug in complex with pre-methylamine dehydrogenase aged 40 days
Total Genus 32
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
32
sequence length
129
structure length
128
Chain Sequence
TDPRAKWVPQDNDIQACDYWRHCSIDGNICDCSGGSLTNCPPGTKLATASVASCYNPTDGQSYLIAYRDCCGYNVSGRCPCLNTEGELPVYRPEFANDIIWCFGAEDDAMTYHCTISPIVGKASHHHH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase/electron transport
molecule keywords Methylamine utilization protein MauG
publication title Diradical intermediate within the context of tryptophan tryptophylquinone biosynthesis.
pubmed doi rcsb
source organism Paracoccus denitrificans
total genus 32
structure length 128
sequence length 129
chains with identical sequence E
ec nomenclature ec 1.4.9.1: Methylamine dehydrogenase (amicyanin).
pdb deposition date 2012-05-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF02975 Me-amine-dh_L Methylamine dehydrogenase, L chain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.30.10 Mainly Beta Sandwich Electron Transport Ethylamine Dehydrogenase Methylamine/Aralkylamine dehydrogenase light chain 4fanC00
4L1QC 3RN0C 2AGYD 2HXCD 3SLEC 1MDAL 2AH0D 2OJYD 2Q7QD 3ORVC 1MG3B 3SWSC 3L4MC 4FANC 4FA5C 3PXTC 2GC7B 2HJBD 2BBKL 2IUVD 2OK6D 3PXSC 4FAVC 4L3HC 2I0RD 3SVWC 4L3GC 2AGXD 2AH1D 2AGLD 3C75L 4Y5RC 2GC4B 1MAFL 2HKMD 2J57K 2J55L 3SXTC 4FA1C 2H3XB 2IUPD 4O1QC 1MAEL 2IAAB 2J56L 4FA4C 2AGWD 2MTAL 2IURD 2IUQD 2OK4D 3RLMC 2AGZD 4FA9C 2I0TD 4K3IC 2HKRD 2MADL 3RN1C 2H47B 3L4OC 3SJLC 3PXWC 3RMZC 1MG2B 2OIZD 2HJ4D 4FB1C 2I0SD
chains in the Genus database with same CATH superfamily
4L1QC 3RN0C 2AGYD 2HXCD 3SLEC 1MDAL 2AH0D 2OJYD 2Q7QD 3ORVC 1MG3B 3SWSC 3L4MC 4FANC 4FA5C 3PXTC 2GC7B 2HJBD 2BBKL 2IUVD 2OK6D 3PXSC 4FAVC 4L3HC 2I0RD 3SVWC 4L3GC 2AGXD 2AH1D 2AGLD 3C75L 4Y5RC 2GC4B 1MAFL 2HKMD 2J57K 2J55L 3SXTC 4FA1C 2H3XB 2IUPD 4O1QC 1MAEL 2IAAB 2J56L 4FA4C 2AGWD 2MTAL 2IURD 2IUQD 2OK4D 3RLMC 2AGZD 4FA9C 2I0TD 4K3IC 2HKRD 2MADL 3RN1C 2H47B 3L4OC 3SJLC 3PXWC 3RMZC 1MG2B 2OIZD 2HJ4D 4FB1C 2I0SD
chains in the Genus database with same CATH topology
4L1QC 3RN0C 2AGYD 2HXCD 3SLEC 1MDAL 2AH0D 2OJYD 2Q7QD 3ORVC 1MG3B 3SWSC 3L4MC 4FANC 4FA5C 3PXTC 2GC7B 2HJBD 2BBKL 2IUVD 2OK6D 3PXSC 4FAVC 4L3HC 2I0RD 3SVWC 4L3GC 2AGXD 2AH1D 2AGLD 3C75L 4Y5RC 2GC4B 1MAFL 2HKMD 2J57K 2J55L 3SXTC 4FA1C 2H3XB 2IUPD 4O1QC 1MAEL 2IAAB 2J56L 4FA4C 2AGWD 2MTAL 2IURD 2IUQD 2OK4D 3RLMC 2AGZD 4FA9C 2I0TD 4K3IC 2HKRD 2MADL 3RN1C 2H47B 3L4OC 3SJLC 3PXWC 3RMZC 1MG2B 2OIZD 2HJ4D 4FB1C 2I0SD
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4L1Q C;  3RN0 C;  2AGY D;  2HXC D;  3SLE C;  1MDA L;  2AH0 D;  2OJY D;  2Q7Q D;  3ORV C;  1MG3 B;  3SWS C;  3L4M C;  4FAN C;  4FA5 C;  3PXT C;  2GC7 B;  2HJB D;  2BBK L;  2IUV D;  2OK6 D;  3PXS C;  4FAV C;  4L3H C;  2I0R D;  3SVW C;  4L3G C;  2AGX D;  2AH1 D;  2AGL D;  3C75 L;  4Y5R C;  2GC4 B;  1MAF L;  2HKM D;  2J57 K;  2J55 L;  3SXT C;  4FA1 C;  2H3X B;  2IUP D;  4O1Q C;  1MAE L;  2IAA B;  2J56 L;  4FA4 C;  2AGW D;  2MTA L;  2IUR D;  2IUQ D;  2OK4 D;  3RLM C;  2AGZ D;  4FA9 C;  2I0T D;  4K3I C;  2HKR D;  2MAD L;  3RN1 C;  2H47 B;  3L4O C;  3SJL C;  3PXW C;  3RMZ C;  1MG2 B;  2OIZ D;  2HJ4 D;  4FB1 C;  2I0S D; 
#chains in the Genus database with same CATH topology
 4L1Q C;  3RN0 C;  2AGY D;  2HXC D;  3SLE C;  1MDA L;  2AH0 D;  2OJY D;  2Q7Q D;  3ORV C;  1MG3 B;  3SWS C;  3L4M C;  4FAN C;  4FA5 C;  3PXT C;  2GC7 B;  2HJB D;  2BBK L;  2IUV D;  2OK6 D;  3PXS C;  4FAV C;  4L3H C;  2I0R D;  3SVW C;  4L3G C;  2AGX D;  2AH1 D;  2AGL D;  3C75 L;  4Y5R C;  2GC4 B;  1MAF L;  2HKM D;  2J57 K;  2J55 L;  3SXT C;  4FA1 C;  2H3X B;  2IUP D;  4O1Q C;  1MAE L;  2IAA B;  2J56 L;  4FA4 C;  2AGW D;  2MTA L;  2IUR D;  2IUQ D;  2OK4 D;  3RLM C;  2AGZ D;  4FA9 C;  2I0T D;  4K3I C;  2HKR D;  2MAD L;  3RN1 C;  2H47 B;  3L4O C;  3SJL C;  3PXW C;  3RMZ C;  1MG2 B;  2OIZ D;  2HJ4 D;  4FB1 C;  2I0S D; 
#chains in the Genus database with same CATH homology
 4L1Q C;  3RN0 C;  2AGY D;  2HXC D;  3SLE C;  1MDA L;  2AH0 D;  2OJY D;  2Q7Q D;  3ORV C;  1MG3 B;  3SWS C;  3L4M C;  4FAN C;  4FA5 C;  3PXT C;  2GC7 B;  2HJB D;  2BBK L;  2IUV D;  2OK6 D;  3PXS C;  4FAV C;  4L3H C;  2I0R D;  3SVW C;  4L3G C;  2AGX D;  2AH1 D;  2AGL D;  3C75 L;  4Y5R C;  2GC4 B;  1MAF L;  2HKM D;  2J57 K;  2J55 L;  3SXT C;  4FA1 C;  2H3X B;  2IUP D;  4O1Q C;  1MAE L;  2IAA B;  2J56 L;  4FA4 C;  2AGW D;  2MTA L;  2IUR D;  2IUQ D;  2OK4 D;  3RLM C;  2AGZ D;  4FA9 C;  2I0T D;  4K3I C;  2HKR D;  2MAD L;  3RN1 C;  2H47 B;  3L4O C;  3SJL C;  3PXW C;  3RMZ C;  1MG2 B;  2OIZ D;  2HJ4 D;  4FB1 C;  2I0S D; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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