4FAOC

Specificity and structure of a high affinity activin-like 1 (alk1) signaling complex
Total Genus 12
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
12
sequence length
75
structure length
75
Chain Sequence
PLVTCTCESPHCKGPTCRGAWCTVVLVREEGRHPQEHRGCGNLHRELCRGRPTEFVNHYCCDSHLCNHNVSLVLE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Signaling protein/signaling protein
molecule keywords Growth/differentiation factor 2
publication title Specificity and Structure of a High Affinity Activin Receptor-like Kinase 1 (ALK1) Signaling Complex.
pubmed doi rcsb
source organism Homo sapiens
total genus 12
structure length 75
sequence length 75
chains with identical sequence D, I, J, O, P, U, V, c, d, i, j
ec nomenclature ec 2.7.11.30: Receptor protein serine/threonine kinase.
pdb deposition date 2012-05-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.60.10 Mainly Beta Ribbon CD59 CD59 4faoC00
1KC4A 1M9ZA 2CRSA 5EBXA 3HH7A 2L5SA 1QM7A 1KL8A 2HLQA 1IJCA 1CCQA 1IQ9A 3ERAA 1KBSA 3U74U 2CRTA 2K3GA 2QJBC 1LXHA 1ZADA 2QJAC 3EBXA 4FAOE 3FEVA 3KFDI 1NYSA 2MUOA 4RUDA 2J8BA 1CRFA 2CDXA 1COEA 1IDIA 5DZ5A 3EVSC 1G6MA 5DU1A 2NBTA 1I02A 1KBTA 3LAQU 1F8UB 1LJZA 1KBAA 5IMTD 1KXIA 2ABXA 1IDLA 4QTIU 1QKDA 4UY2C 3NDSA 4DO8A 1NXBA 1IDHA 2MJ4A 2CTXA 1HAAA 1JE9A 4BIKB 1BTEA 2FD6U 1KTZB 1MAHF 1NTXA 1V6PA 2GOOC 2ERAA 2H62D 4XJJA 2PJYC 1IKCA 1HAJA 1FF4A 1H0JA 2L03A 2QC1A 1PLOA 1JBDA 4FAOC 1CDQA 1HOYA 2MJ0A 1NEAA 1ONJA 3BT1U 3KFDE 1CDTA 1ERGA 1S4YA 1ERAA 2MFAA 1CB9A 2HLRA 1BXPA 4OM5A 5IMYC 1KS6A 1KFHA 1FRAA 4BDTB 2GOOB 2H7ZA 4ZQYA 1HC9A 1ABTA 2BHIA 2H62C 2PJYB 1W6BA 2MHYA 6EBXA 2H5FA 1NYUA 4EY8B 1FASA 4IYEA 1KU6B 2X8BB 1CXNA 1ES7B 1F94A 3NH7A 1TGXA 1UG4A 1YWHA 1CVOA 4OM4A 1REWC 1IDGA 1RL5A 1FSSB 2H7ZB 3QB4B 1XT3A 1HC9B 2H64B 3NEQA 2I9BE 2MJYA 4P7UA 1CXOA 1CHVS 1LXGA 3U73U 1NORA 3PLCA 2JQPA 2JVEA 2H64C 1FFJA 2OFSA 1TFSA 2H8UA 2VLWA 2MUPA 1DRSA 1FSCA 1CODA 4HQPF 2N99A 1TXBA 2UWRA 1IK8A 1CTXA 2UX2A 1VB0A 2LCRA 4LFTA 1NTNA 1TXAA 1CREA 1CDRA 1MR6A 2CCXA 4AEAA 1JGKA 3VTSA 3BT2U 5DO6A 1LX5B 1LSIA 2BTXA 2QJ9C 1RGJA 1QKEA 1CDSA 2LA1A 1B41B 1L4WA
chains in the Genus database with same CATH superfamily
1KC4A 1M9ZA 2CRSA 5EBXA 3HH7A 2L5SA 1QM7A 1KL8A 2HLQA 1IJCA 1CCQA 1IQ9A 3ERAA 1KBSA 3U74U 2CRTA 2K3GA 2QJBC 1LXHA 1ZADA 2QJAC 3EBXA 4FAOE 3FEVA 3KFDI 1NYSA 2MUOA 4RUDA 2J8BA 1CRFA 2CDXA 1COEA 1IDIA 5DZ5A 3EVSC 1G6MA 5DU1A 2NBTA 1I02A 1KBTA 3LAQU 1F8UB 1LJZA 1KBAA 5IMTD 1KXIA 2ABXA 1IDLA 4QTIU 1QKDA 4UY2C 3NDSA 4DO8A 1NXBA 1IDHA 2MJ4A 2CTXA 1HAAA 1JE9A 4BIKB 1BTEA 2FD6U 1KTZB 1MAHF 1NTXA 1V6PA 2GOOC 2ERAA 2H62D 4XJJA 2PJYC 1IKCA 1HAJA 1FF4A 1H0JA 2L03A 2QC1A 1PLOA 1JBDA 4FAOC 1CDQA 1HOYA 2MJ0A 1NEAA 1ONJA 3BT1U 3KFDE 1CDTA 1ERGA 1S4YA 1ERAA 2MFAA 1CB9A 2HLRA 1BXPA 4OM5A 5IMYC 1KS6A 1KFHA 1FRAA 4BDTB 2GOOB 2H7ZA 4ZQYA 1HC9A 1ABTA 2BHIA 2H62C 2PJYB 1W6BA 2MHYA 6EBXA 2H5FA 1NYUA 4EY8B 1FASA 4IYEA 1KU6B 2X8BB 1CXNA 1ES7B 1F94A 3NH7A 1TGXA 1UG4A 1YWHA 1CVOA 4OM4A 1REWC 1IDGA 1RL5A 1FSSB 2H7ZB 3QB4B 1XT3A 1HC9B 2H64B 3NEQA 2I9BE 2MJYA 4P7UA 1CXOA 1CHVS 1LXGA 3U73U 1NORA 3PLCA 2JQPA 2JVEA 2H64C 1FFJA 2OFSA 1TFSA 2H8UA 2VLWA 2MUPA 1DRSA 1FSCA 1CODA 4HQPF 2N99A 1TXBA 2UWRA 1IK8A 1CTXA 4KSNA 2UX2A 1VB0A 2LCRA 4LFTA 1NTNA 1TXAA 1CREA 1CDRA 1MR6A 2CCXA 4AEAA 1JGKA 3VTSA 3BT2U 5DO6A 1LX5B 1LSIA 2BTXA 2QJ9C 1RGJA 1QKEA 1CDSA 2LA1A 1B41B 1L4WA
chains in the Genus database with same CATH topology
1KC4A 1M9ZA 2CRSA 5EBXA 3HH7A 2L5SA 1QM7A 1KL8A 2HLQA 1IJCA 1CCQA 1IQ9A 3ERAA 1KBSA 3U74U 2CRTA 2K3GA 2QJBC 1LXHA 1ZADA 2QJAC 3EBXA 4FAOE 3FEVA 3KFDI 1NYSA 2MUOA 4RUDA 2J8BA 1CRFA 2CDXA 1COEA 1IDIA 5DZ5A 3EVSC 1G6MA 5DU1A 2NBTA 1I02A 1KBTA 3LAQU 1F8UB 1LJZA 1KBAA 5IMTD 1KXIA 2ABXA 1IDLA 4QTIU 1QKDA 4UY2C 3NDSA 4DO8A 1NXBA 1IDHA 2MJ4A 2CTXA 1HAAA 1JE9A 4BIKB 1BTEA 2FD6U 1KTZB 1MAHF 1NTXA 1V6PA 2GOOC 2ERAA 2H62D 4XJJA 2PJYC 1IKCA 1HAJA 1FF4A 1H0JA 2L03A 2QC1A 1PLOA 1JBDA 4FAOC 1CDQA 1HOYA 2MJ0A 1NEAA 1ONJA 3BT1U 3KFDE 1CDTA 1ERGA 1S4YA 1ERAA 2MFAA 1CB9A 2HLRA 1BXPA 4OM5A 5IMYC 1KS6A 1KFHA 1FRAA 4BDTB 2GOOB 2H7ZA 4ZQYA 1HC9A 1ABTA 2BHIA 2H62C 2PJYB 1W6BA 2MHYA 6EBXA 2H5FA 1NYUA 4EY8B 1FASA 4IYEA 1KU6B 2X8BB 1CXNA 1ES7B 1F94A 3NH7A 1TGXA 1UG4A 1YWHA 1CVOA 4OM4A 1REWC 1IDGA 1RL5A 1FSSB 2H7ZB 3QB4B 1XT3A 1HC9B 2H64B 3NEQA 2I9BE 2MJYA 4P7UA 1CXOA 1CHVS 1LXGA 3U73U 1NORA 3PLCA 2JQPA 2JVEA 2H64C 1FFJA 2OFSA 1TFSA 2H8UA 2VLWA 2MUPA 1DRSA 1FSCA 1CODA 4HQPF 2N99A 1TXBA 2UWRA 1IK8A 1CTXA 4KSNA 2UX2A 1VB0A 2LCRA 4LFTA 1NTNA 1TXAA 1CREA 1CDRA 1MR6A 2CCXA 4AEAA 1JGKA 3VTSA 3BT2U 5DO6A 1LX5B 1LSIA 2BTXA 2QJ9C 1RGJA 1QKEA 1CDSA 2LA1A 1B41B 1L4WA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1KC4 A;  1M9Z A;  2CRS A;  5EBX A;  3HH7 A;  2L5S A;  1QM7 A;  1KL8 A;  2HLQ A;  1IJC A;  1CCQ A;  1IQ9 A;  3ERA A;  1KBS A;  3U74 U;  2CRT A;  2K3G A;  2QJB C;  1LXH A;  1ZAD A;  2QJA C;  3EBX A;  4FAO E;  3FEV A;  3KFD I;  1NYS A;  2MUO A;  4RUD A;  2J8B A;  1CRF A;  2CDX A;  1COE A;  1IDI A;  5DZ5 A;  3EVS C;  1G6M A;  5DU1 A;  2NBT A;  1I02 A;  1KBT A;  3LAQ U;  1F8U B;  1LJZ A;  1KBA A;  5IMT D;  1KXI A;  2ABX A;  1IDL A;  4QTI U;  1QKD A;  4UY2 C;  3NDS A;  4DO8 A;  1NXB A;  1IDH A;  2MJ4 A;  2CTX A;  1HAA A;  1JE9 A;  4BIK B;  1BTE A;  2FD6 U;  1KTZ B;  1MAH F;  1NTX A;  1V6P A;  2GOO C;  2ERA A;  2H62 D;  4XJJ A;  2PJY C;  1IKC A;  1HAJ A;  1FF4 A;  1H0J A;  2L03 A;  2QC1 A;  1PLO A;  1JBD A;  4FAO C;  1CDQ A;  1HOY A;  2MJ0 A;  1NEA A;  1ONJ A;  3BT1 U;  3KFD E;  1CDT A;  1ERG A;  1S4Y A;  1ERA A;  2MFA A;  1CB9 A;  2HLR A;  1BXP A;  4OM5 A;  5IMY C;  1KS6 A;  1KFH A;  1FRA A;  4BDT B;  2GOO B;  2H7Z A;  4ZQY A;  1HC9 A;  1ABT A;  2BHI A;  2H62 C;  2PJY B;  1W6B A;  2MHY A;  6EBX A;  2H5F A;  1NYU A;  4EY8 B;  1FAS A;  4IYE A;  1KU6 B;  2X8B B;  1CXN A;  1ES7 B;  1F94 A;  3NH7 A;  1TGX A;  1UG4 A;  1YWH A;  1CVO A;  4OM4 A;  1REW C;  1IDG A;  1RL5 A;  1FSS B;  2H7Z B;  3QB4 B;  1XT3 A;  1HC9 B;  2H64 B;  3NEQ A;  2I9B E;  2MJY A;  4P7U A;  1CXO A;  1CHV S;  1LXG A;  3U73 U;  1NOR A;  3PLC A;  2JQP A;  2JVE A;  2H64 C;  1FFJ A;  2OFS A;  1TFS A;  2H8U A;  2VLW A;  2MUP A;  1DRS A;  1FSC A;  1COD A;  4HQP F;  2N99 A;  1TXB A;  2UWR A;  1IK8 A;  1CTX A;  2UX2 A;  1VB0 A;  2LCR A;  4LFT A;  1NTN A;  1TXA A;  1CRE A;  1CDR A;  1MR6 A;  2CCX A;  4AEA A;  1JGK A;  3VTS A;  3BT2 U;  5DO6 A;  1LX5 B;  1LSI A;  2BTX A;  2QJ9 C;  1RGJ A;  1QKE A;  1CDS A;  2LA1 A;  1B41 B;  1L4W A; 
#chains in the Genus database with same CATH topology
 1KC4 A;  1M9Z A;  2CRS A;  5EBX A;  3HH7 A;  2L5S A;  1QM7 A;  1KL8 A;  2HLQ A;  1IJC A;  1CCQ A;  1IQ9 A;  3ERA A;  1KBS A;  3U74 U;  2CRT A;  2K3G A;  2QJB C;  1LXH A;  1ZAD A;  2QJA C;  3EBX A;  4FAO E;  3FEV A;  3KFD I;  1NYS A;  2MUO A;  4RUD A;  2J8B A;  1CRF A;  2CDX A;  1COE A;  1IDI A;  5DZ5 A;  3EVS C;  1G6M A;  5DU1 A;  2NBT A;  1I02 A;  1KBT A;  3LAQ U;  1F8U B;  1LJZ A;  1KBA A;  5IMT D;  1KXI A;  2ABX A;  1IDL A;  4QTI U;  1QKD A;  4UY2 C;  3NDS A;  4DO8 A;  1NXB A;  1IDH A;  2MJ4 A;  2CTX A;  1HAA A;  1JE9 A;  4BIK B;  1BTE A;  2FD6 U;  1KTZ B;  1MAH F;  1NTX A;  1V6P A;  2GOO C;  2ERA A;  2H62 D;  4XJJ A;  2PJY C;  1IKC A;  1HAJ A;  1FF4 A;  1H0J A;  2L03 A;  2QC1 A;  1PLO A;  1JBD A;  4FAO C;  1CDQ A;  1HOY A;  2MJ0 A;  1NEA A;  1ONJ A;  3BT1 U;  3KFD E;  1CDT A;  1ERG A;  1S4Y A;  1ERA A;  2MFA A;  1CB9 A;  2HLR A;  1BXP A;  4OM5 A;  5IMY C;  1KS6 A;  1KFH A;  1FRA A;  4BDT B;  2GOO B;  2H7Z A;  4ZQY A;  1HC9 A;  1ABT A;  2BHI A;  2H62 C;  2PJY B;  1W6B A;  2MHY A;  6EBX A;  2H5F A;  1NYU A;  4EY8 B;  1FAS A;  4IYE A;  1KU6 B;  2X8B B;  1CXN A;  1ES7 B;  1F94 A;  3NH7 A;  1TGX A;  1UG4 A;  1YWH A;  1CVO A;  4OM4 A;  1REW C;  1IDG A;  1RL5 A;  1FSS B;  2H7Z B;  3QB4 B;  1XT3 A;  1HC9 B;  2H64 B;  3NEQ A;  2I9B E;  2MJY A;  4P7U A;  1CXO A;  1CHV S;  1LXG A;  3U73 U;  1NOR A;  3PLC A;  2JQP A;  2JVE A;  2H64 C;  1FFJ A;  2OFS A;  1TFS A;  2H8U A;  2VLW A;  2MUP A;  1DRS A;  1FSC A;  1COD A;  4HQP F;  2N99 A;  1TXB A;  2UWR A;  1IK8 A;  1CTX A;  4KSN A;  2UX2 A;  1VB0 A;  2LCR A;  4LFT A;  1NTN A;  1TXA A;  1CRE A;  1CDR A;  1MR6 A;  2CCX A;  4AEA A;  1JGK A;  3VTS A;  3BT2 U;  5DO6 A;  1LX5 B;  1LSI A;  2BTX A;  2QJ9 C;  1RGJ A;  1QKE A;  1CDS A;  2LA1 A;  1B41 B;  1L4W A; 
#chains in the Genus database with same CATH homology
 1KC4 A;  1M9Z A;  2CRS A;  5EBX A;  3HH7 A;  2L5S A;  1QM7 A;  1KL8 A;  2HLQ A;  1IJC A;  1CCQ A;  1IQ9 A;  3ERA A;  1KBS A;  3U74 U;  2CRT A;  2K3G A;  2QJB C;  1LXH A;  1ZAD A;  2QJA C;  3EBX A;  4FAO E;  3FEV A;  3KFD I;  1NYS A;  2MUO A;  4RUD A;  2J8B A;  1CRF A;  2CDX A;  1COE A;  1IDI A;  5DZ5 A;  3EVS C;  1G6M A;  5DU1 A;  2NBT A;  1I02 A;  1KBT A;  3LAQ U;  1F8U B;  1LJZ A;  1KBA A;  5IMT D;  1KXI A;  2ABX A;  1IDL A;  4QTI U;  1QKD A;  4UY2 C;  3NDS A;  4DO8 A;  1NXB A;  1IDH A;  2MJ4 A;  2CTX A;  1HAA A;  1JE9 A;  4BIK B;  1BTE A;  2FD6 U;  1KTZ B;  1MAH F;  1NTX A;  1V6P A;  2GOO C;  2ERA A;  2H62 D;  4XJJ A;  2PJY C;  1IKC A;  1HAJ A;  1FF4 A;  1H0J A;  2L03 A;  2QC1 A;  1PLO A;  1JBD A;  4FAO C;  1CDQ A;  1HOY A;  2MJ0 A;  1NEA A;  1ONJ A;  3BT1 U;  3KFD E;  1CDT A;  1ERG A;  1S4Y A;  1ERA A;  2MFA A;  1CB9 A;  2HLR A;  1BXP A;  4OM5 A;  5IMY C;  1KS6 A;  1KFH A;  1FRA A;  4BDT B;  2GOO B;  2H7Z A;  4ZQY A;  1HC9 A;  1ABT A;  2BHI A;  2H62 C;  2PJY B;  1W6B A;  2MHY A;  6EBX A;  2H5F A;  1NYU A;  4EY8 B;  1FAS A;  4IYE A;  1KU6 B;  2X8B B;  1CXN A;  1ES7 B;  1F94 A;  3NH7 A;  1TGX A;  1UG4 A;  1YWH A;  1CVO A;  4OM4 A;  1REW C;  1IDG A;  1RL5 A;  1FSS B;  2H7Z B;  3QB4 B;  1XT3 A;  1HC9 B;  2H64 B;  3NEQ A;  2I9B E;  2MJY A;  4P7U A;  1CXO A;  1CHV S;  1LXG A;  3U73 U;  1NOR A;  3PLC A;  2JQP A;  2JVE A;  2H64 C;  1FFJ A;  2OFS A;  1TFS A;  2H8U A;  2VLW A;  2MUP A;  1DRS A;  1FSC A;  1COD A;  4HQP F;  2N99 A;  1TXB A;  2UWR A;  1IK8 A;  1CTX A;  4KSN A;  2UX2 A;  1VB0 A;  2LCR A;  4LFT A;  1NTN A;  1TXA A;  1CRE A;  1CDR A;  1MR6 A;  2CCX A;  4AEA A;  1JGK A;  3VTS A;  3BT2 U;  5DO6 A;  1LX5 B;  1LSI A;  2BTX A;  2QJ9 C;  1RGJ A;  1QKE A;  1CDS A;  2LA1 A;  1B41 B;  1L4W A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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