4FAVC

Crystal structure of wt maug in complex with pre-methylamine dehydrogenase aged 50 days
Total Genus 31
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
31
sequence length
125
structure length
124
Chain Sequence
TDPRAKWVPQDNDIQACDYWRHCSIDGNICDCSGGSLTNCPPGTKLATASVASCYNPTDGQSYLIAYRDCCGYNVSGRCPCLNTEGELPVYRPEFANDIIWCFGAEDDAMTYHCTISPIVGKAS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase/electron transport
molecule keywords Methylamine utilization protein MauG
publication title Diradical intermediate within the context of tryptophan tryptophylquinone biosynthesis.
pubmed doi rcsb
source organism Paracoccus denitrificans
total genus 31
structure length 124
sequence length 125
chains with identical sequence E
ec nomenclature ec 1.4.9.1: Methylamine dehydrogenase (amicyanin).
pdb deposition date 2012-05-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF02975 Me-amine-dh_L Methylamine dehydrogenase, L chain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.30.10 Mainly Beta Sandwich Electron Transport Ethylamine Dehydrogenase Methylamine/Aralkylamine dehydrogenase light chain 4favC00
4FA4C 3RN1C 2J56L 2AH0D 3RMZC 3C75L 3SXTC 3SWSC 2OIZD 4L3GC 2AGXD 2HJBD 2AH1D 4FB1C 2OJYD 2AGWD 3RN0C 3PXSC 4FA5C 2AGLD 4FA9C 4L1QC 4O1QC 2GC4B 2MTAL 3PXWC 4FANC 2AGYD 2J57K 3ORVC 4K3IC 2IURD 2MADL 2OK6D 2HXCD 2I0SD 2IUVD 4FAVC 2I0RD 3RLMC 2OK4D 2J55L 1MAFL 2HKRD 3PXTC 3L4OC 2Q7QD 1MAEL 2GC7B 2IUPD 2BBKL 4L3HC 1MG3B 2IUQD 3SJLC 2H47B 3SLEC 2AGZD 1MDAL 1MG2B 2HJ4D 4FA1C 2IAAB 3L4MC 4Y5RC 2HKMD 3SVWC 2H3XB 2I0TD
chains in the Genus database with same CATH superfamily
4FA4C 3RN1C 2J56L 2AH0D 3RMZC 3C75L 3SXTC 3SWSC 2OIZD 4L3GC 2AGXD 2HJBD 2AH1D 4FB1C 2OJYD 2AGWD 3RN0C 3PXSC 4FA5C 2AGLD 4FA9C 4L1QC 4O1QC 2GC4B 2MTAL 3PXWC 4FANC 2AGYD 2J57K 3ORVC 4K3IC 2IURD 2MADL 2OK6D 2HXCD 2I0SD 2IUVD 4FAVC 2I0RD 3RLMC 2OK4D 2J55L 1MAFL 2HKRD 3PXTC 3L4OC 2Q7QD 1MAEL 2GC7B 2IUPD 2BBKL 4L3HC 1MG3B 2IUQD 3SJLC 2H47B 3SLEC 2AGZD 1MDAL 1MG2B 2HJ4D 4FA1C 2IAAB 3L4MC 4Y5RC 2HKMD 3SVWC 2H3XB 2I0TD
chains in the Genus database with same CATH topology
4FA4C 3RN1C 2J56L 2AH0D 3RMZC 3C75L 3SXTC 3SWSC 2OIZD 4L3GC 2AGXD 2HJBD 2AH1D 4FB1C 2OJYD 2AGWD 3RN0C 3PXSC 4FA5C 2AGLD 4FA9C 4L1QC 4O1QC 2GC4B 2MTAL 3PXWC 4FANC 2AGYD 2J57K 3ORVC 4K3IC 2IURD 2MADL 2OK6D 2HXCD 2I0SD 2IUVD 4FAVC 2I0RD 3RLMC 2OK4D 2J55L 1MAFL 2HKRD 3PXTC 3L4OC 2Q7QD 1MAEL 2GC7B 2IUPD 2BBKL 4L3HC 1MG3B 2IUQD 3SJLC 2H47B 3SLEC 2AGZD 1MDAL 1MG2B 2HJ4D 4FA1C 2IAAB 3L4MC 4Y5RC 2HKMD 3SVWC 2H3XB 2I0TD
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4FA4 C;  3RN1 C;  2J56 L;  2AH0 D;  3RMZ C;  3C75 L;  3SXT C;  3SWS C;  2OIZ D;  4L3G C;  2AGX D;  2HJB D;  2AH1 D;  4FB1 C;  2OJY D;  2AGW D;  3RN0 C;  3PXS C;  4FA5 C;  2AGL D;  4FA9 C;  4L1Q C;  4O1Q C;  2GC4 B;  2MTA L;  3PXW C;  4FAN C;  2AGY D;  2J57 K;  3ORV C;  4K3I C;  2IUR D;  2MAD L;  2OK6 D;  2HXC D;  2I0S D;  2IUV D;  4FAV C;  2I0R D;  3RLM C;  2OK4 D;  2J55 L;  1MAF L;  2HKR D;  3PXT C;  3L4O C;  2Q7Q D;  1MAE L;  2GC7 B;  2IUP D;  2BBK L;  4L3H C;  1MG3 B;  2IUQ D;  3SJL C;  2H47 B;  3SLE C;  2AGZ D;  1MDA L;  1MG2 B;  2HJ4 D;  4FA1 C;  2IAA B;  3L4M C;  4Y5R C;  2HKM D;  3SVW C;  2H3X B;  2I0T D; 
#chains in the Genus database with same CATH topology
 4FA4 C;  3RN1 C;  2J56 L;  2AH0 D;  3RMZ C;  3C75 L;  3SXT C;  3SWS C;  2OIZ D;  4L3G C;  2AGX D;  2HJB D;  2AH1 D;  4FB1 C;  2OJY D;  2AGW D;  3RN0 C;  3PXS C;  4FA5 C;  2AGL D;  4FA9 C;  4L1Q C;  4O1Q C;  2GC4 B;  2MTA L;  3PXW C;  4FAN C;  2AGY D;  2J57 K;  3ORV C;  4K3I C;  2IUR D;  2MAD L;  2OK6 D;  2HXC D;  2I0S D;  2IUV D;  4FAV C;  2I0R D;  3RLM C;  2OK4 D;  2J55 L;  1MAF L;  2HKR D;  3PXT C;  3L4O C;  2Q7Q D;  1MAE L;  2GC7 B;  2IUP D;  2BBK L;  4L3H C;  1MG3 B;  2IUQ D;  3SJL C;  2H47 B;  3SLE C;  2AGZ D;  1MDA L;  1MG2 B;  2HJ4 D;  4FA1 C;  2IAA B;  3L4M C;  4Y5R C;  2HKM D;  3SVW C;  2H3X B;  2I0T D; 
#chains in the Genus database with same CATH homology
 4FA4 C;  3RN1 C;  2J56 L;  2AH0 D;  3RMZ C;  3C75 L;  3SXT C;  3SWS C;  2OIZ D;  4L3G C;  2AGX D;  2HJB D;  2AH1 D;  4FB1 C;  2OJY D;  2AGW D;  3RN0 C;  3PXS C;  4FA5 C;  2AGL D;  4FA9 C;  4L1Q C;  4O1Q C;  2GC4 B;  2MTA L;  3PXW C;  4FAN C;  2AGY D;  2J57 K;  3ORV C;  4K3I C;  2IUR D;  2MAD L;  2OK6 D;  2HXC D;  2I0S D;  2IUV D;  4FAV C;  2I0R D;  3RLM C;  2OK4 D;  2J55 L;  1MAF L;  2HKR D;  3PXT C;  3L4O C;  2Q7Q D;  1MAE L;  2GC7 B;  2IUP D;  2BBK L;  4L3H C;  1MG3 B;  2IUQ D;  3SJL C;  2H47 B;  3SLE C;  2AGZ D;  1MDA L;  1MG2 B;  2HJ4 D;  4FA1 C;  2IAA B;  3L4M C;  4Y5R C;  2HKM D;  3SVW C;  2H3X B;  2I0T D; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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