4FAVC

Crystal structure of wt maug in complex with pre-methylamine dehydrogenase aged 50 days
Total Genus 31
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
31
sequence length
125
structure length
124
Chain Sequence
TDPRAKWVPQDNDIQACDYWRHCSIDGNICDCSGGSLTNCPPGTKLATASVASCYNPTDGQSYLIAYRDCCGYNVSGRCPCLNTEGELPVYRPEFANDIIWCFGAEDDAMTYHCTISPIVGKAS
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
publication title Diradical intermediate within the context of tryptophan tryptophylquinone biosynthesis.
pubmed doi rcsb
molecule tags Oxidoreductase/electron transport
source organism Paracoccus denitrificans
molecule keywords Methylamine utilization protein MauG
total genus 31
structure length 124
sequence length 125
chains with identical sequence E
ec nomenclature ec 1.4.9.1: Methylamine dehydrogenase (amicyanin).
pdb deposition date 2012-05-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF02975 Me-amine-dh_L Methylamine dehydrogenase, L chain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.30.10 Mainly Beta Sandwich Electron Transport Ethylamine Dehydrogenase Methylamine/Aralkylamine dehydrogenase light chain 4favC00
3SVWC 4FA5C 4FB1C 2GC7B 3L4OC 3PXSC 2HJ4D 2MTAL 2I0TD 3L4MC 2BBKL 3ORVC 3PXWC 3RMZC 2I0SD 3RN0C 1MG3B 1MAFL 2OK4D 4L1QC 3RN1C 3SXTC 3SJLC 4FAVC 4L3GC 2J55L 2IURD 2HJBD 2OIZD 2I0RD 3PXTC 2IUVD 2GC4B 3SLEC 4FA4C 2AGXD 2IUPD 2J56L 1MAEL 3RLMC 2IUQD 4FANC 2AGYD 2OK6D 2OJYD 2AGWD 4K3IC 2HKMD 2AGZD 2Q7QD 2AH0D 3C75L 4L3HC 1MDAL 2AGLD 3SWSC 2H3XB 4O1QC 2H47B 2AH1D 2HXCD 4Y5RC 2IAAB 1MG2B 2HKRD 2J57K 2MADL 4FA9C 4FA1C
chains in the Genus database with same CATH superfamily
3SVWC 4FA5C 4FB1C 2GC7B 3L4OC 3PXSC 2HJ4D 2MTAL 2I0TD 3L4MC 2BBKL 3ORVC 3PXWC 3RMZC 2I0SD 3RN0C 1MG3B 1MAFL 2OK4D 4L1QC 3RN1C 3SXTC 3SJLC 4FAVC 4L3GC 2J55L 2IURD 2HJBD 2OIZD 2I0RD 3PXTC 2IUVD 2GC4B 3SLEC 4FA4C 2AGXD 2IUPD 2J56L 1MAEL 3RLMC 2IUQD 4FANC 2AGYD 2OK6D 2OJYD 2AGWD 4K3IC 2HKMD 2AGZD 2Q7QD 2AH0D 3C75L 4L3HC 1MDAL 2AGLD 3SWSC 2H3XB 4O1QC 2H47B 2AH1D 2HXCD 4Y5RC 2IAAB 1MG2B 2HKRD 2J57K 2MADL 4FA9C 4FA1C
chains in the Genus database with same CATH topology
3SVWC 4FA5C 4FB1C 2GC7B 3L4OC 3PXSC 2HJ4D 2MTAL 2I0TD 3L4MC 2BBKL 3ORVC 3PXWC 3RMZC 2I0SD 3RN0C 1MG3B 1MAFL 2OK4D 4L1QC 3RN1C 3SXTC 3SJLC 4FAVC 4L3GC 2J55L 2IURD 2HJBD 2OIZD 2I0RD 3PXTC 2IUVD 2GC4B 3SLEC 4FA4C 2AGXD 2IUPD 2J56L 1MAEL 3RLMC 2IUQD 4FANC 2AGYD 2OK6D 2OJYD 2AGWD 4K3IC 2HKMD 2AGZD 2Q7QD 2AH0D 3C75L 4L3HC 1MDAL 2AGLD 3SWSC 2H3XB 4O1QC 2H47B 2AH1D 2HXCD 4Y5RC 2IAAB 1MG2B 2HKRD 2J57K 2MADL 4FA9C 4FA1C
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3SVW C;  4FA5 C;  4FB1 C;  2GC7 B;  3L4O C;  3PXS C;  2HJ4 D;  2MTA L;  2I0T D;  3L4M C;  2BBK L;  3ORV C;  3PXW C;  3RMZ C;  2I0S D;  3RN0 C;  1MG3 B;  1MAF L;  2OK4 D;  4L1Q C;  3RN1 C;  3SXT C;  3SJL C;  4FAV C;  4L3G C;  2J55 L;  2IUR D;  2HJB D;  2OIZ D;  2I0R D;  3PXT C;  2IUV D;  2GC4 B;  3SLE C;  4FA4 C;  2AGX D;  2IUP D;  2J56 L;  1MAE L;  3RLM C;  2IUQ D;  4FAN C;  2AGY D;  2OK6 D;  2OJY D;  2AGW D;  4K3I C;  2HKM D;  2AGZ D;  2Q7Q D;  2AH0 D;  3C75 L;  4L3H C;  1MDA L;  2AGL D;  3SWS C;  2H3X B;  4O1Q C;  2H47 B;  2AH1 D;  2HXC D;  4Y5R C;  2IAA B;  1MG2 B;  2HKR D;  2J57 K;  2MAD L;  4FA9 C;  4FA1 C; 
#chains in the Genus database with same CATH topology
 3SVW C;  4FA5 C;  4FB1 C;  2GC7 B;  3L4O C;  3PXS C;  2HJ4 D;  2MTA L;  2I0T D;  3L4M C;  2BBK L;  3ORV C;  3PXW C;  3RMZ C;  2I0S D;  3RN0 C;  1MG3 B;  1MAF L;  2OK4 D;  4L1Q C;  3RN1 C;  3SXT C;  3SJL C;  4FAV C;  4L3G C;  2J55 L;  2IUR D;  2HJB D;  2OIZ D;  2I0R D;  3PXT C;  2IUV D;  2GC4 B;  3SLE C;  4FA4 C;  2AGX D;  2IUP D;  2J56 L;  1MAE L;  3RLM C;  2IUQ D;  4FAN C;  2AGY D;  2OK6 D;  2OJY D;  2AGW D;  4K3I C;  2HKM D;  2AGZ D;  2Q7Q D;  2AH0 D;  3C75 L;  4L3H C;  1MDA L;  2AGL D;  3SWS C;  2H3X B;  4O1Q C;  2H47 B;  2AH1 D;  2HXC D;  4Y5R C;  2IAA B;  1MG2 B;  2HKR D;  2J57 K;  2MAD L;  4FA9 C;  4FA1 C; 
#chains in the Genus database with same CATH homology
 3SVW C;  4FA5 C;  4FB1 C;  2GC7 B;  3L4O C;  3PXS C;  2HJ4 D;  2MTA L;  2I0T D;  3L4M C;  2BBK L;  3ORV C;  3PXW C;  3RMZ C;  2I0S D;  3RN0 C;  1MG3 B;  1MAF L;  2OK4 D;  4L1Q C;  3RN1 C;  3SXT C;  3SJL C;  4FAV C;  4L3G C;  2J55 L;  2IUR D;  2HJB D;  2OIZ D;  2I0R D;  3PXT C;  2IUV D;  2GC4 B;  3SLE C;  4FA4 C;  2AGX D;  2IUP D;  2J56 L;  1MAE L;  3RLM C;  2IUQ D;  4FAN C;  2AGY D;  2OK6 D;  2OJY D;  2AGW D;  4K3I C;  2HKM D;  2AGZ D;  2Q7Q D;  2AH0 D;  3C75 L;  4L3H C;  1MDA L;  2AGL D;  3SWS C;  2H3X B;  4O1Q C;  2H47 B;  2AH1 D;  2HXC D;  4Y5R C;  2IAA B;  1MG2 B;  2HKR D;  2J57 K;  2MAD L;  4FA9 C;  4FA1 C; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...