4FL5A

Crystal structure of human 14-3-3 sigma in complex with a tau-protein peptide surrounding ps214
Total Genus 100
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
100
sequence length
236
structure length
229
Chain Sequence
GAMGSMERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWT
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Signaling protein
molecule keywords 14-3-3 protein sigma
publication title Involvement of 14-3-3 in tubulin instability and impaired axon development is mediated by Tau.
pubmed doi rcsb
source organism Homo sapiens
total genus 100
structure length 229
sequence length 236
chains with identical sequence B
ec nomenclature
pdb deposition date 2012-06-14

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00244 14-3-3 14-3-3 protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.190.20 Mainly Alpha Up-down Bundle Delta-Endotoxin; domain 1 14-3-3 domain 4fl5A00
3O8IA 3SMMA 3RDHA 4N7GA 3T0MA 3M51A 2C74A 2WH0A 2BR9A 3IQJA 5LU1A 1IB1A 4ZDRA 3U9XA 5BY9A 5D3EA 3EFZA 4FL5A 3SP5A 1O9DA 3UZDA 4DHMA 1A38A 3CU8A 2B05A 4DHNA 4BG6A 4JC3A 4N84A 2NPMA 3P1QA 3LW1A 4Y3BA 4DHTA 1YWTA 5LVZA 2C1NA 4F7RA 3P1RA 5LHOA 1A4OA 2BQ0A 4DNKA 1QJBA 4GNTA 2C23A 2BTPA 4FJ3A 1O9FA 2O02A 5LX2A 3IQUA 3SMNA 5LU2A 5D3FA 4Y5IA 3SPRA 3SMOA 1O9CA 4ZQ0A 3P1PA 3T0LA 5F74A 3E6YA 4J6SA 2V7DA 5J31A 5D2DA 1QJAA 4IHLA 5EWZA 3SMLA 4DHOA 4DATA 4IEAA 3MHRA 4QLIA 4DHSA 4FR3A 4DAUA 3P1SA 1A37A 3UBWA 4DHPA 3UALA 3IQVA 1O9EA 1YZ5A 4DHRA 4DHQA 5EXAA 4Y32A 4JDDA 4DX0A 3P1NA 4E2EA 2O98A 3M50A 2C1JA 4N7YA 5BTVA 3NKXA 4HKCA 3AXYC 4WRQA 2C63A 2O8PA 5IQPA 3P1OA 5HF3A 3SMKA 4DHUA 3UX0A 4O46A
chains in the Genus database with same CATH superfamily
4QX1A 3O8IA 3SMMA 3RDHA 4N7GA 3T0MA 3M51A 2C74A 2WH0A 2BR9A 1URJA 3IQJA 1CIYA 4W8JA 3EB7A 5LU1A 1IB1A 4ZDRA 3U9XA 5BY9A 5D3EA 2C9KA 3EFZA 4FL5A 1DLCA 3SP5A 1O9DA 3UZDA 4DHMA 1A38A 3CU8A 2B05A 4MOAA 4DHNA 4BG6A 4JC3A 4N84A 2NPMA 3P1QA 4D8MA 3LW1A 4Y3BA 4DHTA 1YWTA 5LVZA 2C1NA 4ARXA 3P1RA 4F7RA 5LHOA 1A4OA 2BQ0A 4DNKA 1QJBA 4GNTA 2C23A 2BTPA 4FJ3A 4QX0A 4QX2A 1O9FA 2O02A 5LX2A 3IQUA 3SMNA 3CQCA 5LU2A 5D3FA 4Y5IA 3SPRA 3SMOA 1O9CA 4ZQ0A 3P1PA 3T0LA 5F74A 3E6YA 3CQGA 4J6SA 2V7DA 5J31A 5D2DA 1QJAA 4IHLA 5EWZA 3SMLA 4DHOA 3I4RA 4DATA 4IEAA 3MHRA 4QLIA 4DHSA 4FR3A 4DAUA 3P1SA 1A37A 3UBWA 4DHPA 3UALA 4QX3A 3IQVA 1O9EA 1YZ5A 1I5PA 1W99A 1S2XA 4DHRA 4DHQA 5EXAA 4Y32A 4ARYA 1JI6A 4JDDA 4DX0A 3P1NA 4E2EA 2O98A 3M50A 2C1JA 4N7YA 5BTVA 3NKXA 4HKCA 3AXYC 4WRQA 3ZHEB 2C63A 2O8PA 5IQPA 3P1OA 5HF3A 3SMKA 3X0UA 4DHUA 3UX0A 4O46A
chains in the Genus database with same CATH topology
3O8IA 3SMMA 3RDHA 4N7GA 3T0MA 3M51A 2C74A 2WH0A 2BR9A 3IQJA 5LU1A 1IB1A 4ZDRA 3U9XA 5BY9A 5D3EA 3EFZA 4FL5A 3SP5A 1O9DA 3UZDA 4DHMA 1A38A 3CU8A 2B05A 4DHNA 4BG6A 4JC3A 4N84A 2NPMA 3P1QA 3LW1A 4Y3BA 4DHTA 1YWTA 5LVZA 2C1NA 4F7RA 3P1RA 5LHOA 1A4OA 2BQ0A 4DNKA 1QJBA 4GNTA 2C23A 2BTPA 4FJ3A 1O9FA 2O02A 5LX2A 3IQUA 3SMNA 5LU2A 5D3FA 4Y5IA 3SPRA 3SMOA 1O9CA 4ZQ0A 3P1PA 3T0LA 5F74A 3E6YA 4J6SA 2V7DA 5J31A 5D2DA 1QJAA 4IHLA 5EWZA 3SMLA 4DHOA 4DATA 4IEAA 3MHRA 4QLIA 4DHSA 4FR3A 4DAUA 3P1SA 1A37A 3UBWA 4DHPA 3UALA 3IQVA 1O9EA 1YZ5A 4DHRA 4DHQA 5EXAA 4Y32A 4JDDA 4DX0A 3P1NA 4E2EA 2O98A 3M50A 2C1JA 4N7YA 5BTVA 3NKXA 4HKCA 3AXYC 4WRQA 2C63A 2O8PA 5IQPA 3P1OA 5HF3A 3SMKA 4DHUA 3UX0A 4O46A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3O8I A;  3SMM A;  3RDH A;  4N7G A;  3T0M A;  3M51 A;  2C74 A;  2WH0 A;  2BR9 A;  3IQJ A;  5LU1 A;  1IB1 A;  4ZDR A;  3U9X A;  5BY9 A;  5D3E A;  3EFZ A;  4FL5 A;  3SP5 A;  1O9D A;  3UZD A;  4DHM A;  1A38 A;  3CU8 A;  2B05 A;  4DHN A;  4BG6 A;  4JC3 A;  4N84 A;  2NPM A;  3P1Q A;  3LW1 A;  4Y3B A;  4DHT A;  1YWT A;  5LVZ A;  2C1N A;  4F7R A;  3P1R A;  5LHO A;  1A4O A;  2BQ0 A;  4DNK A;  1QJB A;  4GNT A;  2C23 A;  2BTP A;  4FJ3 A;  1O9F A;  2O02 A;  5LX2 A;  3IQU A;  3SMN A;  5LU2 A;  5D3F A;  4Y5I A;  3SPR A;  3SMO A;  1O9C A;  4ZQ0 A;  3P1P A;  3T0L A;  5F74 A;  3E6Y A;  4J6S A;  2V7D A;  5J31 A;  5D2D A;  1QJA A;  4IHL A;  5EWZ A;  3SML A;  4DHO A;  4DAT A;  4IEA A;  3MHR A;  4QLI A;  4DHS A;  4FR3 A;  4DAU A;  3P1S A;  1A37 A;  3UBW A;  4DHP A;  3UAL A;  3IQV A;  1O9E A;  1YZ5 A;  4DHR A;  4DHQ A;  5EXA A;  4Y32 A;  4JDD A;  4DX0 A;  3P1N A;  4E2E A;  2O98 A;  3M50 A;  2C1J A;  4N7Y A;  5BTV A;  3NKX A;  4HKC A;  3AXY C;  4WRQ A;  2C63 A;  2O8P A;  5IQP A;  3P1O A;  5HF3 A;  3SMK A;  4DHU A;  3UX0 A;  4O46 A; 
#chains in the Genus database with same CATH topology
 4QX1 A;  3O8I A;  3SMM A;  3RDH A;  4N7G A;  3T0M A;  3M51 A;  2C74 A;  2WH0 A;  2BR9 A;  1URJ A;  3IQJ A;  1CIY A;  4W8J A;  3EB7 A;  5LU1 A;  1IB1 A;  4ZDR A;  3U9X A;  5BY9 A;  5D3E A;  2C9K A;  3EFZ A;  4FL5 A;  1DLC A;  3SP5 A;  1O9D A;  3UZD A;  4DHM A;  1A38 A;  3CU8 A;  2B05 A;  4MOA A;  4DHN A;  4BG6 A;  4JC3 A;  4N84 A;  2NPM A;  3P1Q A;  4D8M A;  3LW1 A;  4Y3B A;  4DHT A;  1YWT A;  5LVZ A;  2C1N A;  4ARX A;  3P1R A;  4F7R A;  5LHO A;  1A4O A;  2BQ0 A;  4DNK A;  1QJB A;  4GNT A;  2C23 A;  2BTP A;  4FJ3 A;  4QX0 A;  4QX2 A;  1O9F A;  2O02 A;  5LX2 A;  3IQU A;  3SMN A;  3CQC A;  5LU2 A;  5D3F A;  4Y5I A;  3SPR A;  3SMO A;  1O9C A;  4ZQ0 A;  3P1P A;  3T0L A;  5F74 A;  3E6Y A;  3CQG A;  4J6S A;  2V7D A;  5J31 A;  5D2D A;  1QJA A;  4IHL A;  5EWZ A;  3SML A;  4DHO A;  3I4R A;  4DAT A;  4IEA A;  3MHR A;  4QLI A;  4DHS A;  4FR3 A;  4DAU A;  3P1S A;  1A37 A;  3UBW A;  4DHP A;  3UAL A;  4QX3 A;  3IQV A;  1O9E A;  1YZ5 A;  1I5P A;  1W99 A;  1S2X A;  4DHR A;  4DHQ A;  5EXA A;  4Y32 A;  4ARY A;  1JI6 A;  4JDD A;  4DX0 A;  3P1N A;  4E2E A;  2O98 A;  3M50 A;  2C1J A;  4N7Y A;  5BTV A;  3NKX A;  4HKC A;  3AXY C;  4WRQ A;  3ZHE B;  2C63 A;  2O8P A;  5IQP A;  3P1O A;  5HF3 A;  3SMK A;  3X0U A;  4DHU A;  3UX0 A;  4O46 A; 
#chains in the Genus database with same CATH homology
 3O8I A;  3SMM A;  3RDH A;  4N7G A;  3T0M A;  3M51 A;  2C74 A;  2WH0 A;  2BR9 A;  3IQJ A;  5LU1 A;  1IB1 A;  4ZDR A;  3U9X A;  5BY9 A;  5D3E A;  3EFZ A;  4FL5 A;  3SP5 A;  1O9D A;  3UZD A;  4DHM A;  1A38 A;  3CU8 A;  2B05 A;  4DHN A;  4BG6 A;  4JC3 A;  4N84 A;  2NPM A;  3P1Q A;  3LW1 A;  4Y3B A;  4DHT A;  1YWT A;  5LVZ A;  2C1N A;  4F7R A;  3P1R A;  5LHO A;  1A4O A;  2BQ0 A;  4DNK A;  1QJB A;  4GNT A;  2C23 A;  2BTP A;  4FJ3 A;  1O9F A;  2O02 A;  5LX2 A;  3IQU A;  3SMN A;  5LU2 A;  5D3F A;  4Y5I A;  3SPR A;  3SMO A;  1O9C A;  4ZQ0 A;  3P1P A;  3T0L A;  5F74 A;  3E6Y A;  4J6S A;  2V7D A;  5J31 A;  5D2D A;  1QJA A;  4IHL A;  5EWZ A;  3SML A;  4DHO A;  4DAT A;  4IEA A;  3MHR A;  4QLI A;  4DHS A;  4FR3 A;  4DAU A;  3P1S A;  1A37 A;  3UBW A;  4DHP A;  3UAL A;  3IQV A;  1O9E A;  1YZ5 A;  4DHR A;  4DHQ A;  5EXA A;  4Y32 A;  4JDD A;  4DX0 A;  3P1N A;  4E2E A;  2O98 A;  3M50 A;  2C1J A;  4N7Y A;  5BTV A;  3NKX A;  4HKC A;  3AXY C;  4WRQ A;  2C63 A;  2O8P A;  5IQP A;  3P1O A;  5HF3 A;  3SMK A;  4DHU A;  3UX0 A;  4O46 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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