4FUVA

Crystal structure of acinetobacter baumannii caro
Total Genus 57
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
57
sequence length
213
structure length
213
Chain Sequence
KNQLIPVGARAEVGTTGYGGALLWQANPYVGLALGYNGGDISWSDDVKVNGSTYDLDMDNNNVYLNAEIRPWGASTNRWAQGLYVAAGAAYLDNDYDLTRNVDATRSFRVNNQDFIAGADGVKINGQMSYKNDIAPYLGFGFAPKINKNWGVFGEVGAYYTGNPTVKLVSSGSAVTTGDQSLEEAVNAEARKIANDDKYKWLPVGKVGVNFFW
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Outer membrane transport of amino acids and antibiotics by an 8-stranded b-barrel protein
rcsb
source organism Acinetobacter baumannii
molecule tags Transport protein
molecule keywords porin protein associated with imipenem resistance
total genus 57
structure length 213
sequence length 213
ec nomenclature
pdb deposition date 2012-06-28
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.160.170 Mainly Beta Beta Barrel Porin Porin 4fuvA00
4RL9A 4RLBA 4FUVA
chains in the Genus database with same CATH superfamily
5FVNA 4PR7A 4RLCA 1ORMA 3LK41 4LSIA 3VY8X 7PRNA 2Y0HA 1BXWA 3AAEB 4K3BA 4C69X 1HXUA 3UAQA 1OPFA 4AZLA 3HW9A 2K0LA 3WI4A 3HWBA 2J4UP 1PHOA 4O49A 2MNHA 1G90A 5KAFO 3NJTA 2F1CX 2F1TA 3LK2B 2XE2A 3PGUA 4FRXA 3O0EA 3SYBA 2Y0LA 4FMSA 4FT6A 3WI5A 1OSMA 1GFQA 5ADXK 4LSEA 4UB6O 2OMFA 4D64A 3BS0A 2XE5A 4C4VB 3AA6A 3HOLA 1HXTA 3LK3B 3PGRA 4FZLA 4G76A 4O3WA 1Q9FA 2N2MA 2WJRA 4GCPA 5G26A 2JMMA 3TZGA 4GCSA 4O3XB 3AAAB 3GP6A 3WU2O 2K4TA 3SZDA 3EMNX 3PORA 2W80C 3DZMA 2QTKA 1HXXA 4AYDC 2O4VA 3PQSA 4LSHA 4KR8A 6PRNA 3DWOX 3VY9X 3QRCA 1E54A 3SYSA 3LK42 1BH3A 2ZFGA 1MPFA 5H2FO 5JDPA 3DA3A 3PGSA 1ZHXA 2YNKA 4G75A 1IZNB 4O3ZA 3SY7A 2YPVA 4QQ1A 1QJPA 4D5UA 5IYUA 3SY9A 2PORA 2J1NA 4N74A 2R89A 2Y0KA 4GF4A 2KXPA 3V8UA 5E79O 3KZIO 3PRNA 3LK2A 3VE1A 1H6S1 3DWNA 3T24A 4N75A 3AA0B 4IL6O 3UPGA 2KDYA 2R8AA 4AUIA 3JTYA 3VZTX 5G3AA 3NSGA 5B66O 4E1SA 2IWVA 4LSFA 1GFNA 5ADXL 4FQEA 2PRNA 5GTHO 5G39A 3DA4A 1Q9GA 1S5LO 1GFPA 4AKRA 4GCQA 3AAAA 4AYEC 3HOEA 1YS5A 2LFUA 1P4TA 2AXTO 4B61A 4XNKA 2XE1A 5DL7A 4D65A 5GV0A 3AA6B 3KVDD 4FSOA 4AKMA 4AYID 3JCUO 4UB8O 4RJWA 2GE4A 3AA1A 1THQA 2M07A 3A0HO 2XG6A 2KZ7A 3A0BO 3AA7A 4N58A 2Y2XA 2ERVA 3A2SX 4O4XA 1T16A 4RJXA 4KR4A 4KRAA 4E1TA 2WVPA 4AYMC 2N2LA 1ZHTA 1ZHWA 3PF1A 2KC0A 4O4UA 4C4VA 4AFKA 3VZWX 5DL8A 1IZNA 4JCHA 3RBHA 3AAEA 2R4PA 3BRZA 3G7GA 3K19A 1T1LA 4RL9A 2R4NA 4JFBA 2R88A 5EE2A 5G38A 2R4OA 2X27X 3LK3A 4FESA 4RLBA 4FOZA 5GTIO 3T0SA 3POQA 4AYNA 8PRNA 4AKRB 2Y7SA 5TISO 5B5EO 4N59A 4K3CA 1MM4A 2W81C 2XTRA 4BUMX 2M06A 4F4BA 1MM5A 4FUVA 3PQUA 5AFUL 5AFUK 3T20A 3C5OA 1GFOA 4GHBA 4FZNA 1QJ9A 4FZMA 3AA1B 3AA7B 1ZHZA 2FGRA 2FGQX 4FRTA 2XMXA 4XNLA 2LHFA 5DL6A 3POUA 4U9CA 2F1VA 3FYXA 3QRAA 2XE3A 1PRNA 4PJ0O 5D5DA 3UU2A 5KAIO 2IWWA 2KXPB 5PRNA 2ODJA 3BRYA 2WJQA 4Z3TA 2XTQA 4PUXA 1GFMA 1QJ8A 3VE2A 5DL5A 3SZVA 2KZ7B 5T5FA 1ZHYA 2X9KA 2R4LA 2ZLDA 3AA0A 3POXA 4FSPA 4O3YA 3VZUX 2MHLA 4C00A 1BT9A 2JQYA 4CTDA
chains in the Genus database with same CATH topology
5FVNA 4RLCA 1ORMA 3LK41 4LSIA 3VY8X 7PRNA 2Y0HA 1BXWA 3AAEB 4C69X 1HXUA 3UAQA 1OPFA 4AZLA 3HW9A 2K0LA 3WI4A 3HWBA 2J4UP 1PHOA 4O49A 2MNHA 1G90A 3LK2B 2F1TA 2XE2A 4FRXA 3SYBA 3O0EA 2Y0LA 4FMSA 4FT6A 3WI5A 1OSMA 1GFQA 4LSEA 2OMFA 4D64A 2XE5A 3AA6A 3HOLA 1HXTA 3LK3B 4FZLA 4G76A 4O3WA 1Q9FA 2N2MA 4GCPA 5G26A 2JMMA 3TZGA 4GCSA 4O3XB 3AAAB 3GP6A 2K4TA 3SZDA 3EMNX 3PORA 2W80C 2QTKA 1HXXA 4AYDC 2O4VA 3PQSA 4LSHA 4KR8A 6PRNA 3VY9X 3QRCA 1E54A 3SYSA 3LK42 1BH3A 2ZFGA 1MPFA 5JDPA 3DA3A 2YNKA 1ZHXA 4G75A 1IZNB 4O3ZA 3SY7A 2YPVA 4QQ1A 1QJPA 4D5UA 5IYUA 3SY9A 2PORA 2J1NA 2Y0KA 4GF4A 2KXPA 3V8UA 3PRNA 3LK2A 3VE1A 1H6S1 3T24A 3AA0B 3UPGA 2KDYA 4AUIA 3JTYA 3VZTX 3NSGA 4E1SA 4LSFA 1GFNA 5ADXL 2PRNA 3DA4A 1Q9GA 4AKRA 1GFPA 4AYEC 4GCQA 3AAAA 3HOEA 1YS5A 2LFUA 1P4TA 4B61A 4XNKA 2XE1A 5DL7A 4D65A 5GV0A 3AA6B 3KVDD 4FSOA 4AKMA 4AYID 4RJWA 2GE4A 3AA1A 1THQA 2M07A 3AA7A 2XG6A 2KZ7A 4N58A 3T0SA 2Y2XA 2ERVA 3A2SX 4O4XA 4RJXA 4KR4A 4KRAA 4E1TA 4AYMC 2N2LA 1ZHTA 1ZHWA 2KC0A 4O4UA 4AFKA 3VZWX 5DL8A 1IZNA 4JCHA 3RBHA 3AAEA 3G7GA 3K19A 4RL9A 5EE2A 4JFBA 5ADXK 3LK3A 2X27X 4FESA 4RLBA 4FOZA 4AYNA 3POQA 8PRNA 4AKRB 2Y7SA 4N59A 1MM4A 2W81C 2XTRA 4BUMX 2M06A 4F4BA 1MM5A 4FUVA 3PQUA 5AFUL 5AFUK 3T20A 3C5OA 1GFOA 4GHBA 4FZNA 1QJ9A 4FZMA 3AA1B 3AA7B 1ZHZA 2FGRA 2FGQX 4FRTA 2XMXA 4XNLA 2LHFA 5DL6A 3POUA 4U9CA 2F1VA 3FYXA 3QRAA 2XE3A 1PRNA 5D5DA 3UU2A 2KXPB 5PRNA 2ODJA 4Z3TA 2XTQA 4PUXA 1GFMA 1QJ8A 3VE2A 5DL5A 3SZVA 2KZ7B 5T5FA 1ZHYA 2ZLDA 3AA0A 3POXA 4FSPA 4O3YA 3VZUX 2MHLA 1BT9A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4RL9 A;  4RLB A;  4FUV A; 
#chains in the Genus database with same CATH topology
 5FVN A;  4PR7 A;  4RLC A;  1ORM A;  3LK4 1;  4LSI A;  3VY8 X;  7PRN A;  2Y0H A;  1BXW A;  3AAE B;  4K3B A;  4C69 X;  1HXU A;  3UAQ A;  1OPF A;  4AZL A;  3HW9 A;  2K0L A;  3WI4 A;  3HWB A;  2J4U P;  1PHO A;  4O49 A;  2MNH A;  1G90 A;  5KAF O;  3NJT A;  2F1C X;  2F1T A;  3LK2 B;  2XE2 A;  3PGU A;  4FRX A;  3O0E A;  3SYB A;  2Y0L A;  4FMS A;  4FT6 A;  3WI5 A;  1OSM A;  1GFQ A;  5ADX K;  4LSE A;  4UB6 O;  2OMF A;  4D64 A;  3BS0 A;  2XE5 A;  4C4V B;  3AA6 A;  3HOL A;  1HXT A;  3LK3 B;  3PGR A;  4FZL A;  4G76 A;  4O3W A;  1Q9F A;  2N2M A;  2WJR A;  4GCP A;  5G26 A;  2JMM A;  3TZG A;  4GCS A;  4O3X B;  3AAA B;  3GP6 A;  3WU2 O;  2K4T A;  3SZD A;  3EMN X;  3POR A;  2W80 C;  3DZM A;  2QTK A;  1HXX A;  4AYD C;  2O4V A;  3PQS A;  4LSH A;  4KR8 A;  6PRN A;  3DWO X;  3VY9 X;  3QRC A;  1E54 A;  3SYS A;  3LK4 2;  1BH3 A;  2ZFG A;  1MPF A;  5H2F O;  5JDP A;  3DA3 A;  3PGS A;  1ZHX A;  2YNK A;  4G75 A;  1IZN B;  4O3Z A;  3SY7 A;  2YPV A;  4QQ1 A;  1QJP A;  4D5U A;  5IYU A;  3SY9 A;  2POR A;  2J1N A;  4N74 A;  2R89 A;  2Y0K A;  4GF4 A;  2KXP A;  3V8U A;  5E79 O;  3KZI O;  3PRN A;  3LK2 A;  3VE1 A;  1H6S 1;  3DWN A;  3T24 A;  4N75 A;  3AA0 B;  4IL6 O;  3UPG A;  2KDY A;  2R8A A;  4AUI A;  3JTY A;  3VZT X;  5G3A A;  3NSG A;  5B66 O;  4E1S A;  2IWV A;  4LSF A;  1GFN A;  5ADX L;  4FQE A;  2PRN A;  5GTH O;  5G39 A;  3DA4 A;  1Q9G A;  1S5L O;  1GFP A;  4AKR A;  4GCQ A;  3AAA A;  4AYE C;  3HOE A;  1YS5 A;  2LFU A;  1P4T A;  2AXT O;  4B61 A;  4XNK A;  2XE1 A;  5DL7 A;  4D65 A;  5GV0 A;  3AA6 B;  3KVD D;  4FSO A;  4AKM A;  4AYI D;  3JCU O;  4UB8 O;  4RJW A;  2GE4 A;  3AA1 A;  1THQ A;  2M07 A;  3A0H O;  2XG6 A;  2KZ7 A;  3A0B O;  3AA7 A;  4N58 A;  2Y2X A;  2ERV A;  3A2S X;  4O4X A;  1T16 A;  4RJX A;  4KR4 A;  4KRA A;  4E1T A;  2WVP A;  4AYM C;  2N2L A;  1ZHT A;  1ZHW A;  3PF1 A;  2KC0 A;  4O4U A;  4C4V A;  4AFK A;  3VZW X;  5DL8 A;  1IZN A;  4JCH A;  3RBH A;  3AAE A;  2R4P A;  3BRZ A;  3G7G A;  3K19 A;  1T1L A;  4RL9 A;  2R4N A;  4JFB A;  2R88 A;  5EE2 A;  5G38 A;  2R4O A;  2X27 X;  3LK3 A;  4FES A;  4RLB A;  4FOZ A;  5GTI O;  3T0S A;  3POQ A;  4AYN A;  8PRN A;  4AKR B;  2Y7S A;  5TIS O;  5B5E O;  4N59 A;  4K3C A;  1MM4 A;  2W81 C;  2XTR A;  4BUM X;  2M06 A;  4F4B A;  1MM5 A;  4FUV A;  3PQU A;  5AFU L;  5AFU K;  3T20 A;  3C5O A;  1GFO A;  4GHB A;  4FZN A;  1QJ9 A;  4FZM A;  3AA1 B;  3AA7 B;  1ZHZ A;  2FGR A;  2FGQ X;  4FRT A;  2XMX A;  4XNL A;  2LHF A;  5DL6 A;  3POU A;  4U9C A;  2F1V A;  3FYX A;  3QRA A;  2XE3 A;  1PRN A;  4PJ0 O;  5D5D A;  3UU2 A;  5KAI O;  2IWW A;  2KXP B;  5PRN A;  2ODJ A;  3BRY A;  2WJQ A;  4Z3T A;  2XTQ A;  4PUX A;  1GFM A;  1QJ8 A;  3VE2 A;  5DL5 A;  3SZV A;  2KZ7 B;  5T5F A;  1ZHY A;  2X9K A;  2R4L A;  2ZLD A;  3AA0 A;  3POX A;  4FSP A;  4O3Y A;  3VZU X;  2MHL A;  4C00 A;  1BT9 A;  2JQY A;  4CTD A; 
#chains in the Genus database with same CATH homology
 5FVN A;  4RLC A;  1ORM A;  3LK4 1;  4LSI A;  3VY8 X;  7PRN A;  2Y0H A;  1BXW A;  3AAE B;  4C69 X;  1HXU A;  3UAQ A;  1OPF A;  4AZL A;  3HW9 A;  2K0L A;  3WI4 A;  3HWB A;  2J4U P;  1PHO A;  4O49 A;  2MNH A;  1G90 A;  3LK2 B;  2F1T A;  2XE2 A;  4FRX A;  3SYB A;  3O0E A;  2Y0L A;  4FMS A;  4FT6 A;  3WI5 A;  1OSM A;  1GFQ A;  4LSE A;  2OMF A;  4D64 A;  2XE5 A;  3AA6 A;  3HOL A;  1HXT A;  3LK3 B;  4FZL A;  4G76 A;  4O3W A;  1Q9F A;  2N2M A;  4GCP A;  5G26 A;  2JMM A;  3TZG A;  4GCS A;  4O3X B;  3AAA B;  3GP6 A;  2K4T A;  3SZD A;  3EMN X;  3POR A;  2W80 C;  2QTK A;  1HXX A;  4AYD C;  2O4V A;  3PQS A;  4LSH A;  4KR8 A;  6PRN A;  3VY9 X;  3QRC A;  1E54 A;  3SYS A;  3LK4 2;  1BH3 A;  2ZFG A;  1MPF A;  5JDP A;  3DA3 A;  2YNK A;  1ZHX A;  4G75 A;  1IZN B;  4O3Z A;  3SY7 A;  2YPV A;  4QQ1 A;  1QJP A;  4D5U A;  5IYU A;  3SY9 A;  2POR A;  2J1N A;  2Y0K A;  4GF4 A;  2KXP A;  3V8U A;  3PRN A;  3LK2 A;  3VE1 A;  1H6S 1;  3T24 A;  3AA0 B;  3UPG A;  2KDY A;  4AUI A;  3JTY A;  3VZT X;  3NSG A;  4E1S A;  4LSF A;  1GFN A;  5ADX L;  2PRN A;  3DA4 A;  1Q9G A;  4AKR A;  1GFP A;  4AYE C;  4GCQ A;  3AAA A;  3HOE A;  1YS5 A;  2LFU A;  1P4T A;  4B61 A;  4XNK A;  2XE1 A;  5DL7 A;  4D65 A;  5GV0 A;  3AA6 B;  3KVD D;  4FSO A;  4AKM A;  4AYI D;  4RJW A;  2GE4 A;  3AA1 A;  1THQ A;  2M07 A;  3AA7 A;  2XG6 A;  2KZ7 A;  4N58 A;  3T0S A;  2Y2X A;  2ERV A;  3A2S X;  4O4X A;  4RJX A;  4KR4 A;  4KRA A;  4E1T A;  4AYM C;  2N2L A;  1ZHT A;  1ZHW A;  2KC0 A;  4O4U A;  4AFK A;  3VZW X;  5DL8 A;  1IZN A;  4JCH A;  3RBH A;  3AAE A;  3G7G A;  3K19 A;  4RL9 A;  5EE2 A;  4JFB A;  5ADX K;  3LK3 A;  2X27 X;  4FES A;  4RLB A;  4FOZ A;  4AYN A;  3POQ A;  8PRN A;  4AKR B;  2Y7S A;  4N59 A;  1MM4 A;  2W81 C;  2XTR A;  4BUM X;  2M06 A;  4F4B A;  1MM5 A;  4FUV A;  3PQU A;  5AFU L;  5AFU K;  3T20 A;  3C5O A;  1GFO A;  4GHB A;  4FZN A;  1QJ9 A;  4FZM A;  3AA1 B;  3AA7 B;  1ZHZ A;  2FGR A;  2FGQ X;  4FRT A;  2XMX A;  4XNL A;  2LHF A;  5DL6 A;  3POU A;  4U9C A;  2F1V A;  3FYX A;  3QRA A;  2XE3 A;  1PRN A;  5D5D A;  3UU2 A;  2KXP B;  5PRN A;  2ODJ A;  4Z3T A;  2XTQ A;  4PUX A;  1GFM A;  1QJ8 A;  3VE2 A;  5DL5 A;  3SZV A;  2KZ7 B;  5T5F A;  1ZHY A;  2ZLD A;  3AA0 A;  3POX A;  4FSP A;  4O3Y A;  3VZU X;  2MHL A;  1BT9 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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