4G03A

High-resolution crystal structural variance analysis between recombinant and wild-type human serum albumin
Total Genus 218
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
218
sequence length
578
structure length
578
Chain Sequence
SEVAHRFKDLGEENFKALVLIAFAQYLQQCPFEDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQEPERNECFLQHKDDNPNLPRLVRPEVDVMCTAFHDNEETFLKKYLYEIARRHPYFYAPELLFFAKRYKAAFTECCQAADKAACLLPKLDELRDEGKASSAKQRLKCASLQKFGERAFKAWAVARLSQRFPKAEFAEVSKLVTDLTKVHTECCHGDLLECADDRADLAKYICENQDSISSKLKECCEKPLLEKSHCIAEVENDEMPADLPSLAADFVESKDVCKNYAEAKDVFLGMFLYEYARRHPDYSVVLLLRLAKTYETTLEKCCAAADPHECYAKVFDEFKPLVEEPQNLIKQNCELFEQLGEYKFQNALLVRYTKKVPQVSTPTLVEVSRNLGKVGSKCCKHPEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSALEVDETYVPKEFNAETFTFHADICTLSEKERQIKKQTALVELVKHKPKATKEQLKAVMDDFAAFVEKCCKADDKETCFAEEGKKLVAASQAA
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transport protein
molecule keywords Serum albumin
publication title High-resolution Crystal Structural Variance Analysis between Recombinant and Wild-type Human Serum Albumin
rcsb
source organism Homo sapiens
total genus 218
structure length 578
sequence length 578
chains with identical sequence B
ec nomenclature
pdb deposition date 2012-07-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4g03A03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4g03A02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4g03A04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4g03A01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4g03A06
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4g03A05
5HOZA 4LB9A 5IFOA 1GNJA 3LU7A 1E7AA 1HA2A 3JQZA 1KW2A 1BM0A 1GNIA 2VUEA 4ZBRA 2BXAA 4PO0A 5ID9A 1HK1A 2XSIA 2VDBA 1J7EA 4IW2A 4F5UA 4LUFA 2BX8A 4ZBQA 2XW1A 5IJFA 4BKEA 1J78A 4HGMB 3V08A 4LA0A 4OT2A 4F5SA 2BXKA 1HK2A 4LB2A 5DQFA 3A73A 4F5VA 4E99A 4N0UD 4K71A 4N0FD 2BXFA 3B9LA 2BXPA 3UIVA 3SQJA 2XVWA 2BXEA 1E7CA 2XVUA 2BXGA 2VUFA 1TF0A 4L9QA 4EMXA 4JK4A 4G03A 4Z69A 2I30A 2BXHA 2YDFA 1AO6A 4OR0A 1HK3A 4K2CA 5DBYA 1E7HA 1E7GA 2BXOA 3TDLA 1KXPD 2I2ZA 3LU8A 1HK5A 4L9KA 2BXBA 4LUHA 1H9ZA 4HGKA 1E7BA 5IJEA 4G04A 5GHKA 2BXCA 1N5UA 1O9XA 2XVQA 2BXIA 1HK4A 3JRYA 1MA9A 5ID7A 2BXDA 2XW0A 5IIUA 2BXLA 2BXNA 4F5TA 1BKEA 1LOTA 5IIXA 4J2VA 1E78A 2BXMA 1BJ5A 1E7FA 5FUOA 1E7IA 1UORA 3CX9A 4IW1A 1E7EA 5IIHA 5IJ5A 3V03A 3B9MA 4S1YA 3V09A 3LU6A 2BXQA 4L8UA 2XVVA
chains in the Genus database with same CATH superfamily
2DYMA 5HOZA 1KDXA 4C31B 3NVMA 4LB9A 4TQ0A 5IFOA 1GNJA 3KJLA 3LU7A 1E7AA 1HA2A 2EFHA 5BPKA 3WHSA 1IJGA 3JQZA 1KW2A 4FIPB 2LXSA 4TQ1A 1BM0A 1GNIA 2VUEA 4ZBRA 2BXAA 3A75A 4PO0A 3PLAA 5ID9A 1HK1A 2XSIA 2Z8KA 2VDBA 1J7EA 4IW2A 4I9OA 4F5UA 2CKXA 4LUFA 2BX8A 4W4UB 3ICXA 4ZBQA 2XW1A 4GDXA 5IJFA 4BKEA 4ZCGA 1J78A 1MIWA 3GA9L 4HGMB 5GIPA 4ZUXV 3NMUA 3V08A 2DYOA 3W1SA 4LA0A 4OT2A 4F5SA 1MIYA 2BXKA 4N3ZA 4OTTA 3KIKA 1HK2A 4LB2A 5DQFA 3A73A 3WHQA 4F5VA 4E99A 2ROHA 4K71A 4N0UD 4NAWB 2E0XA 2OZBB 4N0FD 4DM0A 4M70B 2BXFA 3B9LA 2BXPA 3FWBC 4BY9C 3NVIA 3FWCC 2KBZA 3UIVA 3SQJA 2EFEA 2XVWA 2Z8JA 1H5WA 4MBEC 2BXEA 2KWFA 1E7CA 1MUHA 1VFIA 2XVUA 2BXGA 2VUFA 1TF0A 4L9QA 3SIVB 2K0NA 3ECPA 3H3AA 2NQOA 4EMXA 4JK4A 2GUTA 1MM8A 4G03A 1JNBA 2I30A 4Z69A 2BXHA 2YDFA 1AO6A 4OR0A 1HK3A 5GINA 2OT3A 4WA6B 4K2CA 2DBUA 4GDLB 1LNSA 5DBYA 4ZBKA 1MUSA 2QMCA 1E7HA 1E7GA 2BXOA 2LXTA 2XMOA 4GG2A 3H37A 3TDLA 1KXPD 2I2ZA 2DBWA 2LOQA 1HK5A 3BPJA 3LU8A 4L9KA 2BXBA 3WHRA 5GIOA 4LUHA 1H9ZA 4HGKA 3SIUB 1E7BA 1NT2B 4G04A 5IJEA 5GHKA 2EFCA 2JUHA 3MHHB 2BXCA 1N5UA 1O9XA 3M99C 2V36A 1VZSA 2XVQA 2BXIA 2LQHA 1FOUA 1HK4A 4G01A 3JRYA 1MA9A 5ID7A 2BXDA 2XW0A 4D7XA 5IIUA 2BXLA 2BXNA 4F5TA 2QM6A 2DBXA 3FNMA 1BKEA 1LOTA 2LQIA 4GDKB 5IIXA 4J2VA 1E78A 2BXMA 5D7GA 4FK5B 2DG5A 3MHSB 4Z9OA 3GQXA 4ZC6A 1BJ5A 1E7FA 3VQIA 1E7IA 5B5TA 5FUOA 1MIVA 3NVKA 4DHXB 1UORA 3CX9A 3G9KD 4IW1A 1SB0A 1E7EA 2Z8IA 4OTUA 5IIHA 2AGHB 5IJ5A 3V03A 2AJEA 2NNWA 3B9MA 4FJCB 3GQUA 4S1YA 2QHBA 1TXUA 3V09A 2E0YA 2EFDA 3LU6A 2BXQA 4L8UA 2XVVA
chains in the Genus database with same CATH topology
2DYMA 5HOZA 4C31B 3NVMA 4LB9A 4TQ0A 5IFOA 1GNJA 3KJLA 3LU7A 1E7AA 1HA2A 2EFHA 5BPKA 3WHSA 1IJGA 3JQZA 1KW2A 4FIPB 4TQ1A 1BM0A 1GNIA 2VUEA 4ZBRA 2BXAA 3A75A 4PO0A 3PLAA 5ID9A 1HK1A 2XSIA 2Z8KA 2VDBA 1J7EA 4IW2A 4F5UA 2CKXA 4LUFA 2BX8A 4W4UB 3ICXA 4ZBQA 2XW1A 4GDXA 5IJFA 4BKEA 4ZCGA 1J78A 1MIWA 3GA9L 4HGMB 5GIPA 4ZUXV 3NMUA 3V08A 2DYOA 3W1SA 4LA0A 4OT2A 4F5SA 1MIYA 2BXKA 4N3ZA 4OTTA 3KIKA 1HK2A 4LB2A 5DQFA 3A73A 3WHQA 4F5VA 4E99A 2ROHA 4K71A 4N0UD 4NAWB 2E0XA 2OZBB 4N0FD 4M70B 2BXFA 3B9LA 2BXPA 3FWBC 4BY9C 3NVIA 3FWCC 2KBZA 3UIVA 3SQJA 2EFEA 2XVWA 2Z8JA 1H5WA 4MBEC 2BXEA 1E7CA 1VFIA 2XVUA 2BXGA 2VUFA 1TF0A 4L9QA 3SIVB 3H3AA 2NQOA 4EMXA 4JK4A 4G03A 1JNBA 2I30A 4Z69A 2BXHA 2YDFA 1AO6A 4OR0A 1HK3A 5GINA 2OT3A 4WA6B 4K2CA 2DBUA 4GDLB 1LNSA 5DBYA 4ZBKA 2QMCA 1E7HA 1E7GA 2BXOA 2XMOA 4GG2A 3TDLA 3H37A 1KXPD 2I2ZA 2DBWA 2LOQA 1HK5A 3LU8A 4L9KA 3WHRA 2BXBA 5GIOA 4LUHA 1H9ZA 4HGKA 3SIUB 1E7BA 1NT2B 4G04A 5IJEA 5GHKA 2EFCA 2JUHA 3MHHB 2BXCA 1N5UA 1O9XA 3M99C 2V36A 1VZSA 2XVQA 2BXIA 1FOUA 1HK4A 4G01A 3JRYA 1MA9A 5ID7A 2BXDA 2XW0A 5IIUA 2BXLA 2BXNA 4F5TA 2QM6A 2DBXA 3FNMA 1BKEA 1LOTA 4GDKB 5IIXA 4J2VA 1E78A 2BXMA 5D7GA 4FK5B 2DG5A 3MHSB 4Z9OA 3GQXA 4ZC6A 1BJ5A 1E7FA 3VQIA 1E7IA 5B5TA 5FUOA 1MIVA 3NVKA 4DHXB 1UORA 3CX9A 3G9KD 4IW1A 1E7EA 2Z8IA 4OTUA 5IIHA 5IJ5A 3V03A 2AJEA 2NNWA 3B9MA 4FJCB 3GQUA 4S1YA 2QHBA 1TXUA 3V09A 2E0YA 2EFDA 3LU6A 2BXQA 4L8UA 2XVVA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5HOZ A;  4LB9 A;  5IFO A;  1GNJ A;  3LU7 A;  1E7A A;  1HA2 A;  3JQZ A;  1KW2 A;  1BM0 A;  1GNI A;  2VUE A;  4ZBR A;  2BXA A;  4PO0 A;  5ID9 A;  1HK1 A;  2XSI A;  2VDB A;  1J7E A;  4IW2 A;  4F5U A;  4LUF A;  2BX8 A;  4ZBQ A;  2XW1 A;  5IJF A;  4BKE A;  1J78 A;  4HGM B;  3V08 A;  4LA0 A;  4OT2 A;  4F5S A;  2BXK A;  1HK2 A;  4LB2 A;  5DQF A;  3A73 A;  4F5V A;  4E99 A;  4N0U D;  4K71 A;  4N0F D;  2BXF A;  3B9L A;  2BXP A;  3UIV A;  3SQJ A;  2XVW A;  2BXE A;  1E7C A;  2XVU A;  2BXG A;  2VUF A;  1TF0 A;  4L9Q A;  4EMX A;  4JK4 A;  4G03 A;  4Z69 A;  2I30 A;  2BXH A;  2YDF A;  1AO6 A;  4OR0 A;  1HK3 A;  4K2C A;  5DBY A;  1E7H A;  1E7G A;  2BXO A;  3TDL A;  1KXP D;  2I2Z A;  3LU8 A;  1HK5 A;  4L9K A;  2BXB A;  4LUH A;  1H9Z A;  4HGK A;  1E7B A;  5IJE A;  4G04 A;  5GHK A;  2BXC A;  1N5U A;  1O9X A;  2XVQ A;  2BXI A;  1HK4 A;  3JRY A;  1MA9 A;  5ID7 A;  2BXD A;  2XW0 A;  5IIU A;  2BXL A;  2BXN A;  4F5T A;  1BKE A;  1LOT A;  5IIX A;  4J2V A;  1E78 A;  2BXM A;  1BJ5 A;  1E7F A;  5FUO A;  1E7I A;  1UOR A;  3CX9 A;  4IW1 A;  1E7E A;  5IIH A;  5IJ5 A;  3V03 A;  3B9M A;  4S1Y A;  3V09 A;  3LU6 A;  2BXQ A;  4L8U A;  2XVV A; 
#chains in the Genus database with same CATH topology
 2DYM A;  5HOZ A;  1KDX A;  4C31 B;  3NVM A;  4LB9 A;  4TQ0 A;  5IFO A;  1GNJ A;  3KJL A;  3LU7 A;  1E7A A;  1HA2 A;  2EFH A;  5BPK A;  3WHS A;  1IJG A;  3JQZ A;  1KW2 A;  4FIP B;  2LXS A;  4TQ1 A;  1BM0 A;  1GNI A;  2VUE A;  4ZBR A;  2BXA A;  3A75 A;  4PO0 A;  3PLA A;  5ID9 A;  1HK1 A;  2XSI A;  2Z8K A;  2VDB A;  1J7E A;  4IW2 A;  4I9O A;  4F5U A;  2CKX A;  4LUF A;  2BX8 A;  4W4U B;  3ICX A;  4ZBQ A;  2XW1 A;  4GDX A;  5IJF A;  4BKE A;  4ZCG A;  1J78 A;  1MIW A;  3GA9 L;  4HGM B;  5GIP A;  4ZUX V;  3NMU A;  3V08 A;  2DYO A;  3W1S A;  4LA0 A;  4OT2 A;  4F5S A;  1MIY A;  2BXK A;  4N3Z A;  4OTT A;  3KIK A;  1HK2 A;  4LB2 A;  5DQF A;  3A73 A;  3WHQ A;  4F5V A;  4E99 A;  2ROH A;  4K71 A;  4N0U D;  4NAW B;  2E0X A;  2OZB B;  4N0F D;  4DM0 A;  4M70 B;  2BXF A;  3B9L A;  2BXP A;  3FWB C;  4BY9 C;  3NVI A;  3FWC C;  2KBZ A;  3UIV A;  3SQJ A;  2EFE A;  2XVW A;  2Z8J A;  1H5W A;  4MBE C;  2BXE A;  2KWF A;  1E7C A;  1MUH A;  1VFI A;  2XVU A;  2BXG A;  2VUF A;  1TF0 A;  4L9Q A;  3SIV B;  2K0N A;  3ECP A;  3H3A A;  2NQO A;  4EMX A;  4JK4 A;  2GUT A;  1MM8 A;  4G03 A;  1JNB A;  2I30 A;  4Z69 A;  2BXH A;  2YDF A;  1AO6 A;  4OR0 A;  1HK3 A;  5GIN A;  2OT3 A;  4WA6 B;  4K2C A;  2DBU A;  4GDL B;  1LNS A;  5DBY A;  4ZBK A;  1MUS A;  2QMC A;  1E7H A;  1E7G A;  2BXO A;  2LXT A;  2XMO A;  4GG2 A;  3H37 A;  3TDL A;  1KXP D;  2I2Z A;  2DBW A;  2LOQ A;  1HK5 A;  3BPJ A;  3LU8 A;  4L9K A;  2BXB A;  3WHR A;  5GIO A;  4LUH A;  1H9Z A;  4HGK A;  3SIU B;  1E7B A;  1NT2 B;  4G04 A;  5IJE A;  5GHK A;  2EFC A;  2JUH A;  3MHH B;  2BXC A;  1N5U A;  1O9X A;  3M99 C;  2V36 A;  1VZS A;  2XVQ A;  2BXI A;  2LQH A;  1FOU A;  1HK4 A;  4G01 A;  3JRY A;  1MA9 A;  5ID7 A;  2BXD A;  2XW0 A;  4D7X A;  5IIU A;  2BXL A;  2BXN A;  4F5T A;  2QM6 A;  2DBX A;  3FNM A;  1BKE A;  1LOT A;  2LQI A;  4GDK B;  5IIX A;  4J2V A;  1E78 A;  2BXM A;  5D7G A;  4FK5 B;  2DG5 A;  3MHS B;  4Z9O A;  3GQX A;  4ZC6 A;  1BJ5 A;  1E7F A;  3VQI A;  1E7I A;  5B5T A;  5FUO A;  1MIV A;  3NVK A;  4DHX B;  1UOR A;  3CX9 A;  3G9K D;  4IW1 A;  1SB0 A;  1E7E A;  2Z8I A;  4OTU A;  5IIH A;  2AGH B;  5IJ5 A;  3V03 A;  2AJE A;  2NNW A;  3B9M A;  4FJC B;  3GQU A;  4S1Y A;  2QHB A;  1TXU A;  3V09 A;  2E0Y A;  2EFD A;  3LU6 A;  2BXQ A;  4L8U A;  2XVV A; 
#chains in the Genus database with same CATH homology
 2DYM A;  5HOZ A;  4C31 B;  3NVM A;  4LB9 A;  4TQ0 A;  5IFO A;  1GNJ A;  3KJL A;  3LU7 A;  1E7A A;  1HA2 A;  2EFH A;  5BPK A;  3WHS A;  1IJG A;  3JQZ A;  1KW2 A;  4FIP B;  4TQ1 A;  1BM0 A;  1GNI A;  2VUE A;  4ZBR A;  2BXA A;  3A75 A;  4PO0 A;  3PLA A;  5ID9 A;  1HK1 A;  2XSI A;  2Z8K A;  2VDB A;  1J7E A;  4IW2 A;  4F5U A;  2CKX A;  4LUF A;  2BX8 A;  4W4U B;  3ICX A;  4ZBQ A;  2XW1 A;  4GDX A;  5IJF A;  4BKE A;  4ZCG A;  1J78 A;  1MIW A;  3GA9 L;  4HGM B;  5GIP A;  4ZUX V;  3NMU A;  3V08 A;  2DYO A;  3W1S A;  4LA0 A;  4OT2 A;  4F5S A;  1MIY A;  2BXK A;  4N3Z A;  4OTT A;  3KIK A;  1HK2 A;  4LB2 A;  5DQF A;  3A73 A;  3WHQ A;  4F5V A;  4E99 A;  2ROH A;  4K71 A;  4N0U D;  4NAW B;  2E0X A;  2OZB B;  4N0F D;  4M70 B;  2BXF A;  3B9L A;  2BXP A;  3FWB C;  4BY9 C;  3NVI A;  3FWC C;  2KBZ A;  3UIV A;  3SQJ A;  2EFE A;  2XVW A;  2Z8J A;  1H5W A;  4MBE C;  2BXE A;  1E7C A;  1VFI A;  2XVU A;  2BXG A;  2VUF A;  1TF0 A;  4L9Q A;  3SIV B;  3H3A A;  2NQO A;  4EMX A;  4JK4 A;  4G03 A;  1JNB A;  2I30 A;  4Z69 A;  2BXH A;  2YDF A;  1AO6 A;  4OR0 A;  1HK3 A;  5GIN A;  2OT3 A;  4WA6 B;  4K2C A;  2DBU A;  4GDL B;  1LNS A;  5DBY A;  4ZBK A;  2QMC A;  1E7H A;  1E7G A;  2BXO A;  2XMO A;  4GG2 A;  3TDL A;  3H37 A;  1KXP D;  2I2Z A;  2DBW A;  2LOQ A;  1HK5 A;  3LU8 A;  4L9K A;  3WHR A;  2BXB A;  5GIO A;  4LUH A;  1H9Z A;  4HGK A;  3SIU B;  1E7B A;  1NT2 B;  4G04 A;  5IJE A;  5GHK A;  2EFC A;  2JUH A;  3MHH B;  2BXC A;  1N5U A;  1O9X A;  3M99 C;  2V36 A;  1VZS A;  2XVQ A;  2BXI A;  1FOU A;  1HK4 A;  4G01 A;  3JRY A;  1MA9 A;  5ID7 A;  2BXD A;  2XW0 A;  5IIU A;  2BXL A;  2BXN A;  4F5T A;  2QM6 A;  2DBX A;  3FNM A;  1BKE A;  1LOT A;  4GDK B;  5IIX A;  4J2V A;  1E78 A;  2BXM A;  5D7G A;  4FK5 B;  2DG5 A;  3MHS B;  4Z9O A;  3GQX A;  4ZC6 A;  1BJ5 A;  1E7F A;  3VQI A;  1E7I A;  5B5T A;  5FUO A;  1MIV A;  3NVK A;  4DHX B;  1UOR A;  3CX9 A;  3G9K D;  4IW1 A;  1E7E A;  2Z8I A;  4OTU A;  5IIH A;  5IJ5 A;  3V03 A;  2AJE A;  2NNW A;  3B9M A;  4FJC B;  3GQU A;  4S1Y A;  2QHB A;  1TXU A;  3V09 A;  2E0Y A;  2EFD A;  3LU6 A;  2BXQ A;  4L8U A;  2XVV A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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