4H4FB

Crystal structure of human chymotrypsin c (ctrc) bound to inhibitor eglin c from hirudo medicinalis
Total Genus 15
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
15
sequence length
63
structure length
63
Chain Sequence
KSFPEVVGKTVDQAREYFTLHYPQYDVYFLPEGSPVTLDLRYNRVRVFYNPGTNVVNHVPHVG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase/hydrolase inhibitor
molecule keywords Chymotrypsin-C
publication title Long-range Electrostatic Complementarity Governs Substrate Recognition by Human Chymotrypsin C, a Key Regulator of Digestive Enzyme Activation.
pubmed doi rcsb
source organism Homo sapiens
total genus 15
structure length 63
sequence length 63
ec nomenclature
pdb deposition date 2012-09-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF00280 potato_inhibit Potato inhibitor I family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.10.10 Alpha Beta 2-Layer Sandwich Trypsin Inhibitor V; Chain A Trypsin Inhibitor V, subunit A 4h4fB00
1Y3BI 1SIBI 3RDZC 1EGLA 1TM1I 1TM3I 4B1TB 1Y4DI 3W0DA 1YPAI 1Y34I 2TECI 5FBZB 1SBNI 3TECI 1TMGI 1Y48I 1TECI 1Y3CI 1TM7I 1YPCI 4B2AB 1HYMA 1MITA 1CSEI 1ACBI 1Y4AI 1MEEI 1Y1KI 1Y3FI 1COAI 3W0EA 2CI2I 3CI2A 1CISA 1TM5I 1Y33I 1TO1I 1TM4I 5FFNI 3RDYA 1VBWA 1LW6I 2SECI 4B2BB 1TO2I 1Y3DI 1YPBI 2SNII 1TINA 4H4FB 1DWMA 4B2CB
chains in the Genus database with same CATH superfamily
1Y3BI 1SIBI 3RDZC 1EGLA 2KUFA 1TM1I 1TM3I 4B1TB 1Y4DI 3W0DA 2MGVA 1YPAI 1Y34I 2TECI 3M9GA 1SBNI 5FBZB 3TECI 1TMGI 1Y48I 1TECI 1Y3CI 1TM7I 4H4FB 1YPCI 5E10A 4B2AB 1HYMA 1MITA 1CSEI 1ACBI 1Y4AI 1MEEI 1Y1KI 1Y3FI 1COAI 3W0EA 2KUEA 3OUVA 2CI2I 3CI2A 5E0YA 1CISA 1TM5I 1Y33I 1TO1I 1TM4I 5FFNI 3RDYA 1VBWA 1LW6I 2SECI 4B2BB 1TO2I 3PY9A 2KUDA 1Y3DI 5E0ZA 1YPBI 2SNII 1TINA 2KUIA 1DWMA 4B2CB
chains in the Genus database with same CATH topology
1Y3BI 1SIBI 3RDZC 1EGLA 1TM1I 1TM3I 4B1TB 1Y4DI 3W0DA 1YPAI 1Y34I 2TECI 5FBZB 1SBNI 3TECI 1TMGI 1Y48I 1TECI 1Y3CI 1TM7I 1YPCI 4B2AB 1HYMA 1MITA 1CSEI 1ACBI 1Y4AI 1MEEI 1Y1KI 1Y3FI 1COAI 3W0EA 2CI2I 3CI2A 1CISA 1TM5I 1Y33I 1TO1I 1TM4I 5FFNI 3RDYA 1VBWA 1LW6I 2SECI 4B2BB 1TO2I 1Y3DI 1YPBI 2SNII 1TINA 4H4FB 1DWMA 4B2CB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1Y3B I;  1SIB I;  3RDZ C;  1EGL A;  1TM1 I;  1TM3 I;  4B1T B;  1Y4D I;  3W0D A;  1YPA I;  1Y34 I;  2TEC I;  5FBZ B;  1SBN I;  3TEC I;  1TMG I;  1Y48 I;  1TEC I;  1Y3C I;  1TM7 I;  1YPC I;  4B2A B;  1HYM A;  1MIT A;  1CSE I;  1ACB I;  1Y4A I;  1MEE I;  1Y1K I;  1Y3F I;  1COA I;  3W0E A;  2CI2 I;  3CI2 A;  1CIS A;  1TM5 I;  1Y33 I;  1TO1 I;  1TM4 I;  5FFN I;  3RDY A;  1VBW A;  1LW6 I;  2SEC I;  4B2B B;  1TO2 I;  1Y3D I;  1YPB I;  2SNI I;  1TIN A;  4H4F B;  1DWM A;  4B2C B; 
#chains in the Genus database with same CATH topology
 1Y3B I;  1SIB I;  3RDZ C;  1EGL A;  2KUF A;  1TM1 I;  1TM3 I;  4B1T B;  1Y4D I;  3W0D A;  2MGV A;  1YPA I;  1Y34 I;  2TEC I;  3M9G A;  1SBN I;  5FBZ B;  3TEC I;  1TMG I;  1Y48 I;  1TEC I;  1Y3C I;  1TM7 I;  4H4F B;  1YPC I;  5E10 A;  4B2A B;  1HYM A;  1MIT A;  1CSE I;  1ACB I;  1Y4A I;  1MEE I;  1Y1K I;  1Y3F I;  1COA I;  3W0E A;  2KUE A;  3OUV A;  2CI2 I;  3CI2 A;  5E0Y A;  1CIS A;  1TM5 I;  1Y33 I;  1TO1 I;  1TM4 I;  5FFN I;  3RDY A;  1VBW A;  1LW6 I;  2SEC I;  4B2B B;  1TO2 I;  3PY9 A;  2KUD A;  1Y3D I;  5E0Z A;  1YPB I;  2SNI I;  1TIN A;  2KUI A;  1DWM A;  4B2C B; 
#chains in the Genus database with same CATH homology
 1Y3B I;  1SIB I;  3RDZ C;  1EGL A;  1TM1 I;  1TM3 I;  4B1T B;  1Y4D I;  3W0D A;  1YPA I;  1Y34 I;  2TEC I;  5FBZ B;  1SBN I;  3TEC I;  1TMG I;  1Y48 I;  1TEC I;  1Y3C I;  1TM7 I;  1YPC I;  4B2A B;  1HYM A;  1MIT A;  1CSE I;  1ACB I;  1Y4A I;  1MEE I;  1Y1K I;  1Y3F I;  1COA I;  3W0E A;  2CI2 I;  3CI2 A;  1CIS A;  1TM5 I;  1Y33 I;  1TO1 I;  1TM4 I;  5FFN I;  3RDY A;  1VBW A;  1LW6 I;  2SEC I;  4B2B B;  1TO2 I;  1Y3D I;  1YPB I;  2SNI I;  1TIN A;  4H4F B;  1DWM A;  4B2C B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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