4HJHA

Iodide sad phased crystal structure of a phosphoglucomutase from brucella melitensis complexed with glucose-6-phosphate
Total Genus 159
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
159
sequence length
472
structure length
466
Chain Sequence
NSLKFGTSGLRGLAVELNGLPAYAYTMAFVQMLAAKGQLQKGDKVFVGRDLRPSSPDIAALAMGAIEDAGFTPVNCGVLPTPALSYYAMGAKAPSIMVTGHIPDDRNGLKFYRRDGEIDKDDEAAISAAYRKLPALAARKHVGSTETDAALQAYADRYAGFLGKGSLNGLRVGVYQHSSVARDLLMYLLTTLGVEPVALGRSDIFVPVDTEALRPEDIALLAQWGKSDRLDAIVSTDGDADRPLIADEHGQFVRGDLAGAITATWVGADTLVTPVTSNTALESRFPKVLRTRVGSPYVIASMAQVSGPVIGFEANGGVLLGSTVERNGRSLTALPTRDALLPILACLATVHEKKTPLSTIARSYGFRVALSDRLQNIPQEASTAFLALLEDADKRASLFPAGDAIVRVETIDGVKLFFQSGNAVHYRASGNAPELRCYVESSDDTQAAKLQALGLEIARKALKDAT
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Phosphomannomutase
publication title Iodide SAD phased crystal structure of a phosphoglucomutase from Brucella melitensis complexed with glucose-6-phosphate
rcsb
source organism Brucella melitensis bv. 1
molecule tags Isomerase
total genus 159
structure length 466
sequence length 472
chains with identical sequence B
ec nomenclature ec 5.4.2.8: Phosphomannomutase.
pdb deposition date 2012-10-12
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.310.50 Alpha Beta 2-Layer Sandwich TATA-Binding Protein Alpha-D-phosphohexomutase, C-terminal domain 4hjhA04
3.40.120.10 Alpha Beta 3-Layer(aba) Sandwich Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 4hjhA03
3.40.120.10 Alpha Beta 3-Layer(aba) Sandwich Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 4hjhA01
3.40.120.10 Alpha Beta 3-Layer(aba) Sandwich Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 4hjhA02
1KFQA 1PCMX 3ENCA 2FKFA 2JPIA 1P5GX 1KFIA 1WJWA 5BMPA 2EHPA 2DKAA 5JN5A 4IL8A 4WXAA 4WX8A 1TUOA 3ENOC 1LXTA 3UW2A 2DKDA 4QG5A 2H5AX 5EPCA 3NA5A 1PCJX 4BJUA 4MRQA 2FUVA 1K2YX 3I3WA 1C4GA 2FKMX 5JMVD 1JDYA 2DKCA 5KL0A 3BKQX 4HJHA 3C04A 3RSMA 1WQAA 1P5DX 5BMNA 2F7LA 3PMGA 2H4LX 1C47A 1K35A 3PDKA 5F9CA 2EIUA 3OLPA 5HSHA 1VKLA 2Z0FA
chains in the Genus database with same CATH superfamily
4EAJA 2QLVA 1W80A 3OH9A 1QN6A 3DPUA 1PCMX 1Q9UA 3ENCA 1M5Q1 4D7RA 2D0BA 1NVPA 3F0ZA 1J3MA 1KFIA 2PWWA 5BMPA 1LWVA 2EHPA 1UT7A 5JN5A 4IL8A 1E42A 2G30A 1TUOA 3UW2A 2DKDA 1JFIC 5EPCA 4EALA 4EJYA 3NA5A 1HU0A 1PCJX 4EJZA 2NOIA 1UL7A 1PZDA 5JMVD 2DKCA 2IV9A 2NOBA 1VOLB 5IYBP 4HJHA 3KRMA 3C04A 3ULXA 1WQAA 3PMGA 3OSEA 1QNAA 2QR1A 3H1ZA 3PDKA 3HS9A 4D7QA 1R4XA 2NOFA 2FGTA 4TPSA 1V5SA 4EAGA 2D0AA 3VN5A 5HSHA 1VKLA 3OSTA 1M3HA 1LWWA 4B0AA 3KTUA 4C7PA 1YTFA 1VOKA 1QN9A 1WJWA 4PY5A 3OSMA 3HS8A 1QN5A 3ASMA 1B9KA 1T6AA 4EAKA 3CVSA 1KO9A 4MRQA 2JHJA 2FUVA 3OH6A 1K2YX 3IH7A 2QREA 2FKMX 2NOLA 1FN7A 1N3CA 2I5WA 4DULA 2OOXA 1M3QA 3OGDA 1PVSA 2V9JA 1VTLE 1EUVA 1C47A 3EAYA 1QN8A 1TBAB 2JHNA 3OLPA 1RM1A 1AISA 2HL8A 2NOHA 3DPTA 3CVTA 2JOIA 2Z0FA 2ZFDB 1KFQA 3F10A 2FKFA 1P5GX 2Y8QA 4ROEB 4WZSD 1N3AA 2DKAA 4WX8A 3ENOC 1LXTA 1YQKA 3CWSA 1TBPA 2H5AX 1VTOA 2O3OA 2XHIA 1XSZA 3N89A 1N39A 4BJUA 1C9BB 1D3UA 1QN4A 1TGHA 3T4NA 1QNEA 1YQRA 1QTPA 1JDYA 5IYCP 2HZSA 2YH5A 3SNSA 2EHBD 3TDHA 2QRCA 3CWUA 1QTSA 1QNCA 2D0CA 1K35A 1YQLA 2NOEA 1KYFA 1YQMA 1DIZA 3TE5A 2R5XA 1PCZA 4RODB 1NH2A 3RPJA 3I0WA 1KY7A 2V8QA 2NVMA 1KYDA 1MPGA 4Q11A 2JPIA 1QN3A 2MZ8A 2QRDA 4WXAA 2NLVA 2V92A 1CDWA 2IV8A 2NWVA 2OOYA 2YA3A 3CWTA 4QG5A 3D4VA 3D7QA 4ROCB 2HKPA 2HZMA 3EIKA 3I3WA 1C4GA 4CFFA 1QNBA 1QN7A 2VJ0A 3I0XA 1YTBA 2NOZA 2Y8LA 1KY6A 5KL0A 4I8OA 3BKQX 3OC3C 5AN4A 2LAEA 1P5DX 3RSMA 1MP9A 2F7LA 2H4LX 2HL9A 2Z8UA 5BMNA 1NGMA 5F9CA 3CW7A 2EIUA 1KYUA 4EAIA 5IYDP 1UT4A 1LWYA 3OCIA 1EBMA 2MJ7A 3CWAA
chains in the Genus database with same CATH topology
1KFQA 1PCMX 3ENCA 2FKFA 2JPIA 1P5GX 1KFIA 1WJWA 5BMPA 2EHPA 2DKAA 5JN5A 4IL8A 4WXAA 4WX8A 1TUOA 3ENOC 1LXTA 3UW2A 2DKDA 4QG5A 2H5AX 5EPCA 3NA5A 1PCJX 4BJUA 4MRQA 2FUVA 1K2YX 3I3WA 1C4GA 2FKMX 5JMVD 1JDYA 2DKCA 5KL0A 3BKQX 4HJHA 3C04A 3RSMA 1WQAA 1P5DX 5BMNA 2F7LA 3PMGA 2H4LX 1C47A 1K35A 3PDKA 5F9CA 2EIUA 3OLPA 5HSHA 1VKLA 2Z0FA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1KFQ A;  1PCM X;  3ENC A;  2FKF A;  2JPI A;  1P5G X;  1KFI A;  1WJW A;  5BMP A;  2EHP A;  2DKA A;  5JN5 A;  4IL8 A;  4WXA A;  4WX8 A;  1TUO A;  3ENO C;  1LXT A;  3UW2 A;  2DKD A;  4QG5 A;  2H5A X;  5EPC A;  3NA5 A;  1PCJ X;  4BJU A;  4MRQ A;  2FUV A;  1K2Y X;  3I3W A;  1C4G A;  2FKM X;  5JMV D;  1JDY A;  2DKC A;  5KL0 A;  3BKQ X;  4HJH A;  3C04 A;  3RSM A;  1WQA A;  1P5D X;  5BMN A;  2F7L A;  3PMG A;  2H4L X;  1C47 A;  1K35 A;  3PDK A;  5F9C A;  2EIU A;  3OLP A;  5HSH A;  1VKL A;  2Z0F A; 
#chains in the Genus database with same CATH topology
 4EAJ A;  2QLV A;  1W80 A;  3OH9 A;  1QN6 A;  3DPU A;  1PCM X;  1Q9U A;  3ENC A;  1M5Q 1;  4D7R A;  2D0B A;  1NVP A;  3F0Z A;  1J3M A;  1KFI A;  2PWW A;  5BMP A;  1LWV A;  2EHP A;  1UT7 A;  5JN5 A;  4IL8 A;  1E42 A;  2G30 A;  1TUO A;  3UW2 A;  2DKD A;  1JFI C;  5EPC A;  4EAL A;  4EJY A;  3NA5 A;  1HU0 A;  1PCJ X;  4EJZ A;  2NOI A;  1UL7 A;  1PZD A;  5JMV D;  2DKC A;  2IV9 A;  2NOB A;  1VOL B;  5IYB P;  4HJH A;  3KRM A;  3C04 A;  3ULX A;  1WQA A;  3PMG A;  3OSE A;  1QNA A;  2QR1 A;  3H1Z A;  3PDK A;  3HS9 A;  4D7Q A;  1R4X A;  2NOF A;  2FGT A;  4TPS A;  1V5S A;  4EAG A;  2D0A A;  3VN5 A;  5HSH A;  1VKL A;  3OST A;  1M3H A;  1LWW A;  4B0A A;  3KTU A;  4C7P A;  1YTF A;  1VOK A;  1QN9 A;  1WJW A;  4PY5 A;  3OSM A;  3HS8 A;  1QN5 A;  3ASM A;  1B9K A;  1T6A A;  4EAK A;  3CVS A;  1KO9 A;  4MRQ A;  2JHJ A;  2FUV A;  3OH6 A;  1K2Y X;  3IH7 A;  2QRE A;  2FKM X;  2NOL A;  1FN7 A;  1N3C A;  2I5W A;  4DUL A;  2OOX A;  1M3Q A;  3OGD A;  1PVS A;  2V9J A;  1VTL E;  1EUV A;  1C47 A;  3EAY A;  1QN8 A;  1TBA B;  2JHN A;  3OLP A;  1RM1 A;  1AIS A;  2HL8 A;  2NOH A;  3DPT A;  3CVT A;  2JOI A;  2Z0F A;  2ZFD B;  1KFQ A;  3F10 A;  2FKF A;  1P5G X;  2Y8Q A;  4ROE B;  4WZS D;  1N3A A;  2DKA A;  4WX8 A;  3ENO C;  1LXT A;  1YQK A;  3CWS A;  1TBP A;  2H5A X;  1VTO A;  2O3O A;  2XHI A;  1XSZ A;  3N89 A;  1N39 A;  4BJU A;  1C9B B;  1D3U A;  1QN4 A;  1TGH A;  3T4N A;  1QNE A;  1YQR A;  1QTP A;  1JDY A;  5IYC P;  2HZS A;  2YH5 A;  3SNS A;  2EHB D;  3TDH A;  2QRC A;  3CWU A;  1QTS A;  1QNC A;  2D0C A;  1K35 A;  1YQL A;  2NOE A;  1KYF A;  1YQM A;  1DIZ A;  3TE5 A;  2R5X A;  1PCZ A;  4ROD B;  1NH2 A;  3RPJ A;  3I0W A;  1KY7 A;  2V8Q A;  2NVM A;  1KYD A;  1MPG A;  4Q11 A;  2JPI A;  1QN3 A;  2MZ8 A;  2QRD A;  4WXA A;  2NLV A;  2V92 A;  1CDW A;  2IV8 A;  2NWV A;  2OOY A;  2YA3 A;  3CWT A;  4QG5 A;  3D4V A;  3D7Q A;  4ROC B;  2HKP A;  2HZM A;  3EIK A;  3I3W A;  1C4G A;  4CFF A;  1QNB A;  1QN7 A;  2VJ0 A;  3I0X A;  1YTB A;  2NOZ A;  2Y8L A;  1KY6 A;  5KL0 A;  4I8O A;  3BKQ X;  3OC3 C;  5AN4 A;  2LAE A;  1P5D X;  3RSM A;  1MP9 A;  2F7L A;  2H4L X;  2HL9 A;  2Z8U A;  5BMN A;  1NGM A;  5F9C A;  3CW7 A;  2EIU A;  1KYU A;  4EAI A;  5IYD P;  1UT4 A;  1LWY A;  3OCI A;  1EBM A;  2MJ7 A;  3CWA A; 
#chains in the Genus database with same CATH homology
 1KFQ A;  1PCM X;  3ENC A;  2FKF A;  2JPI A;  1P5G X;  1KFI A;  1WJW A;  5BMP A;  2EHP A;  2DKA A;  5JN5 A;  4IL8 A;  4WXA A;  4WX8 A;  1TUO A;  3ENO C;  1LXT A;  3UW2 A;  2DKD A;  4QG5 A;  2H5A X;  5EPC A;  3NA5 A;  1PCJ X;  4BJU A;  4MRQ A;  2FUV A;  1K2Y X;  3I3W A;  1C4G A;  2FKM X;  5JMV D;  1JDY A;  2DKC A;  5KL0 A;  3BKQ X;  4HJH A;  3C04 A;  3RSM A;  1WQA A;  1P5D X;  5BMN A;  2F7L A;  3PMG A;  2H4L X;  1C47 A;  1K35 A;  3PDK A;  5F9C A;  2EIU A;  3OLP A;  5HSH A;  1VKL A;  2Z0F A; 
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similar chains in the pdb database (?% sequence similarity)

 
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