4HJHA

Iodide sad phased crystal structure of a phosphoglucomutase from brucella melitensis complexed with glucose-6-phosphate
Total Genus 159
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
159
sequence length
472
structure length
466
Chain Sequence
NSLKFGTSGLRGLAVELNGLPAYAYTMAFVQMLAAKGQLQKGDKVFVGRDLRPSSPDIAALAMGAIEDAGFTPVNCGVLPTPALSYYAMGAKAPSIMVTGHIPDDRNGLKFYRRDGEIDKDDEAAISAAYRKLPALAARKHVGSTETDAALQAYADRYAGFLGKGSLNGLRVGVYQHSSVARDLLMYLLTTLGVEPVALGRSDIFVPVDTEALRPEDIALLAQWGKSDRLDAIVSTDGDADRPLIADEHGQFVRGDLAGAITATWVGADTLVTPVTSNTALESRFPKVLRTRVGSPYVIASMAQVSGPVIGFEANGGVLLGSTVERNGRSLTALPTRDALLPILACLATVHEKKTPLSTIARSYGFRVALSDRLQNIPQEASTAFLALLEDADKRASLFPAGDAIVRVETIDGVKLFFQSGNAVHYRASGNAPELRCYVESSDDTQAAKLQALGLEIARKALKDAT
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Phosphomannomutase
publication title Iodide SAD phased crystal structure of a phosphoglucomutase from Brucella melitensis complexed with glucose-6-phosphate
rcsb
source organism Brucella melitensis bv. 1
molecule tags Isomerase
total genus 159
structure length 466
sequence length 472
chains with identical sequence B
ec nomenclature ec 5.4.2.8: Phosphomannomutase.
pdb deposition date 2012-10-12
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.310.50 Alpha Beta 2-Layer Sandwich TATA-Binding Protein Alpha-D-phosphohexomutase, C-terminal domain 4hjhA04
3.40.120.10 Alpha Beta 3-Layer(aba) Sandwich Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 4hjhA03
3.40.120.10 Alpha Beta 3-Layer(aba) Sandwich Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 4hjhA01
3.40.120.10 Alpha Beta 3-Layer(aba) Sandwich Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 4hjhA02
5BMPA 2H4LX 3C04A 1TUOA 3BKQX 1K2YX 2Z0FA 1P5GX 2EIUA 4HJHA 5JMVD 2EHPA 1K35A 1C4GA 3ENCA 3ENOC 1C47A 2DKDA 1VKLA 2F7LA 3PDKA 5EPCA 1WQAA 5BMNA 1KFIA 1PCJX 2H5AX 2JPIA 3PMGA 4QG5A 1P5DX 1PCMX 1KFQA 1JDYA 2FUVA 2DKAA 1WJWA 2FKFA 3I3WA 3RSMA 2DKCA 4MRQA 1LXTA 5HSHA 4IL8A 2FKMX 3OLPA 5F9CA 4WXAA 3NA5A 5JN5A 5KL0A 3UW2A 4BJUA 4WX8A
chains in the Genus database with same CATH superfamily
3TDHA 4D7RA 3BKQX 1QN9A 3H1ZA 1K2YX 1QN7A 2Z0FA 4I8OA 1QNEA 1QN3A 1EUVA 1QTPA 1KY7A 2ZFDB 2NOHA 3ULXA 1TBPA 1MP9A 1N39A 1PCZA 1KYFA 3HS9A 2D0CA 3T4NA 2QRDA 4EJYA 4EAKA 3EAYA 3SNSA 4Q11A 2FGTA 2Z8UA 5EPCA 3CWTA 1P5DX 2Y8QA 3CVSA 1CDWA 1QNCA 2FKFA 3I3WA 3KRMA 3OSMA 2HZSA 4MRQA 4C7PA 1LXTA 2HKPA 2V9JA 2NOLA 2QR1A 2HL9A 1MPGA 4ROCB 5IYCP 1YQLA 2Y8LA 1YQRA 3D4VA 2NOEA 2LAEA 2OOYA 1UT4A 1YTBA 3I0WA 3F10A 2EIUA 4HJHA 1K35A 2IV8A 2QRCA 3DPTA 3ENCA 1KO9A 1TBAB 3N89A 2OOXA 2QLVA 1C47A 2DKDA 3OSEA 3PDKA 2D0BA 1WQAA 5BMNA 2V92A 1KFIA 1PCJX 1E42A 3OC3C 3PMGA 1NH2A 1AISA 2NOBA 1QN5A 1T6AA 1PCMX 4B0AA 2HZMA 1LWVA 1LWYA 4EJZA 2NOFA 3IH7A 2JHNA 4RODB 4PY5A 2PWWA 1VTLE 1JFIC 3OGDA 1PZDA 4IL8A 3DPUA 5F9CA 4WXAA 3CWUA 1M3QA 3UW2A 2V8QA 2HL8A 5BMPA 2H4LX 3C04A 1P5GX 1KYUA 3RPJA 5JMVD 3HS8A 1VOLB 2NOIA 4D7QA 1EBMA 2EHPA 1C4GA 4CFFA 2D0AA 2O3OA 1NGMA 1YTFA 1LWWA 5IYDP 2R5XA 2F7LA 1VKLA 2G30A 3EIKA 1QTSA 2IV9A 1XSZA 3ASMA 4EAJA 1YQMA 1YQKA 3CW7A 4QG5A 1N3AA 1QNAA 1KFQA 1JDYA 2FUVA 1VOKA 1WJWA 1D3UA 4WZSD 1HU0A 1KYDA 1NVPA 1DIZA 2MJ7A 5KL0A 1W80A 3OSTA 4WX8A 4BJUA 4DULA 1QN8A 1QN6A 4EAGA 1PVSA 3CWAA 1M3HA 3OH6A 3CWSA 1TUOA 3D7QA 4TPSA 2NVMA 2QREA 1Q9UA 1V5SA 5AN4A 1KY6A 2NLVA 1C9BB 2YH5A 1TGHA 3ENOC 3F0ZA 2YA3A 2MZ8A 2JOIA 1QN4A 1VTOA 3CVTA 2VJ0A 5IYBP 4EALA 2I5WA 1FN7A 3VN5A 1UL7A 4EAIA 2JPIA 2H5AX 1J3MA 2NWVA 2NOZA 1UT7A 3OH9A 2EHBD 2DKAA 2XHIA 3RSMA 1R4XA 1QNBA 3KTUA 2DKCA 3I0XA 1M5Q1 3OCIA 5HSHA 4ROEB 1N3CA 1B9KA 2FKMX 3OLPA 3TE5A 5JN5A 3NA5A 1RM1A 2JHJA
chains in the Genus database with same CATH topology
5BMPA 2H4LX 3C04A 1TUOA 3BKQX 1K2YX 2Z0FA 1P5GX 2EIUA 4HJHA 5JMVD 2EHPA 1K35A 1C4GA 3ENCA 3ENOC 1C47A 2DKDA 1VKLA 2F7LA 3PDKA 5EPCA 1WQAA 5BMNA 1KFIA 1PCJX 2H5AX 2JPIA 3PMGA 4QG5A 1P5DX 1PCMX 1KFQA 1JDYA 2FUVA 2DKAA 1WJWA 2FKFA 3I3WA 3RSMA 2DKCA 4MRQA 1LXTA 5HSHA 4IL8A 2FKMX 3OLPA 5F9CA 4WXAA 3NA5A 5JN5A 5KL0A 3UW2A 4BJUA 4WX8A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5BMP A;  2H4L X;  3C04 A;  1TUO A;  3BKQ X;  1K2Y X;  2Z0F A;  1P5G X;  2EIU A;  4HJH A;  5JMV D;  2EHP A;  1K35 A;  1C4G A;  3ENC A;  3ENO C;  1C47 A;  2DKD A;  1VKL A;  2F7L A;  3PDK A;  5EPC A;  1WQA A;  5BMN A;  1KFI A;  1PCJ X;  2H5A X;  2JPI A;  3PMG A;  4QG5 A;  1P5D X;  1PCM X;  1KFQ A;  1JDY A;  2FUV A;  2DKA A;  1WJW A;  2FKF A;  3I3W A;  3RSM A;  2DKC A;  4MRQ A;  1LXT A;  5HSH A;  4IL8 A;  2FKM X;  3OLP A;  5F9C A;  4WXA A;  3NA5 A;  5JN5 A;  5KL0 A;  3UW2 A;  4BJU A;  4WX8 A; 
#chains in the Genus database with same CATH topology
 3TDH A;  4D7R A;  3BKQ X;  1QN9 A;  3H1Z A;  1K2Y X;  1QN7 A;  2Z0F A;  4I8O A;  1QNE A;  1QN3 A;  1EUV A;  1QTP A;  1KY7 A;  2ZFD B;  2NOH A;  3ULX A;  1TBP A;  1MP9 A;  1N39 A;  1PCZ A;  1KYF A;  3HS9 A;  2D0C A;  3T4N A;  2QRD A;  4EJY A;  4EAK A;  3EAY A;  3SNS A;  4Q11 A;  2FGT A;  2Z8U A;  5EPC A;  3CWT A;  1P5D X;  2Y8Q A;  3CVS A;  1CDW A;  1QNC A;  2FKF A;  3I3W A;  3KRM A;  3OSM A;  2HZS A;  4MRQ A;  4C7P A;  1LXT A;  2HKP A;  2V9J A;  2NOL A;  2QR1 A;  2HL9 A;  1MPG A;  4ROC B;  5IYC P;  1YQL A;  2Y8L A;  1YQR A;  3D4V A;  2NOE A;  2LAE A;  2OOY A;  1UT4 A;  1YTB A;  3I0W A;  3F10 A;  2EIU A;  4HJH A;  1K35 A;  2IV8 A;  2QRC A;  3DPT A;  3ENC A;  1KO9 A;  1TBA B;  3N89 A;  2OOX A;  2QLV A;  1C47 A;  2DKD A;  3OSE A;  3PDK A;  2D0B A;  1WQA A;  5BMN A;  2V92 A;  1KFI A;  1PCJ X;  1E42 A;  3OC3 C;  3PMG A;  1NH2 A;  1AIS A;  2NOB A;  1QN5 A;  1T6A A;  1PCM X;  4B0A A;  2HZM A;  1LWV A;  1LWY A;  4EJZ A;  2NOF A;  3IH7 A;  2JHN A;  4ROD B;  4PY5 A;  2PWW A;  1VTL E;  1JFI C;  3OGD A;  1PZD A;  4IL8 A;  3DPU A;  5F9C A;  4WXA A;  3CWU A;  1M3Q A;  3UW2 A;  2V8Q A;  2HL8 A;  5BMP A;  2H4L X;  3C04 A;  1P5G X;  1KYU A;  3RPJ A;  5JMV D;  3HS8 A;  1VOL B;  2NOI A;  4D7Q A;  1EBM A;  2EHP A;  1C4G A;  4CFF A;  2D0A A;  2O3O A;  1NGM A;  1YTF A;  1LWW A;  5IYD P;  2R5X A;  2F7L A;  1VKL A;  2G30 A;  3EIK A;  1QTS A;  2IV9 A;  1XSZ A;  3ASM A;  4EAJ A;  1YQM A;  1YQK A;  3CW7 A;  4QG5 A;  1N3A A;  1QNA A;  1KFQ A;  1JDY A;  2FUV A;  1VOK A;  1WJW A;  1D3U A;  4WZS D;  1HU0 A;  1KYD A;  1NVP A;  1DIZ A;  2MJ7 A;  5KL0 A;  1W80 A;  3OST A;  4WX8 A;  4BJU A;  4DUL A;  1QN8 A;  1QN6 A;  4EAG A;  1PVS A;  3CWA A;  1M3H A;  3OH6 A;  3CWS A;  1TUO A;  3D7Q A;  4TPS A;  2NVM A;  2QRE A;  1Q9U A;  1V5S A;  5AN4 A;  1KY6 A;  2NLV A;  1C9B B;  2YH5 A;  1TGH A;  3ENO C;  3F0Z A;  2YA3 A;  2MZ8 A;  2JOI A;  1QN4 A;  1VTO A;  3CVT A;  2VJ0 A;  5IYB P;  4EAL A;  2I5W A;  1FN7 A;  3VN5 A;  1UL7 A;  4EAI A;  2JPI A;  2H5A X;  1J3M A;  2NWV A;  2NOZ A;  1UT7 A;  3OH9 A;  2EHB D;  2DKA A;  2XHI A;  3RSM A;  1R4X A;  1QNB A;  3KTU A;  2DKC A;  3I0X A;  1M5Q 1;  3OCI A;  5HSH A;  4ROE B;  1N3C A;  1B9K A;  2FKM X;  3OLP A;  3TE5 A;  5JN5 A;  3NA5 A;  1RM1 A;  2JHJ A; 
#chains in the Genus database with same CATH homology
 5BMP A;  2H4L X;  3C04 A;  1TUO A;  3BKQ X;  1K2Y X;  2Z0F A;  1P5G X;  2EIU A;  4HJH A;  5JMV D;  2EHP A;  1K35 A;  1C4G A;  3ENC A;  3ENO C;  1C47 A;  2DKD A;  1VKL A;  2F7L A;  3PDK A;  5EPC A;  1WQA A;  5BMN A;  1KFI A;  1PCJ X;  2H5A X;  2JPI A;  3PMG A;  4QG5 A;  1P5D X;  1PCM X;  1KFQ A;  1JDY A;  2FUV A;  2DKA A;  1WJW A;  2FKF A;  3I3W A;  3RSM A;  2DKC A;  4MRQ A;  1LXT A;  5HSH A;  4IL8 A;  2FKM X;  3OLP A;  5F9C A;  4WXA A;  3NA5 A;  5JN5 A;  5KL0 A;  3UW2 A;  4BJU A;  4WX8 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...