4HKCA

14-3-3-zeta in complex with s1011 phosphorylated integrin alpha-4 peptide
Total Genus 101
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
101
sequence length
229
structure length
229
Chain Sequence
DKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQKTEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Signaling protein/peptide
molecule keywords 14-3-3 protein zeta/delta
publication title Characterization of 14-3-3-zeta Interactions with integrin tails
pubmed doi rcsb
source organism Homo sapiens
total genus 101
structure length 229
sequence length 229
ec nomenclature
pdb deposition date 2012-10-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00244 14-3-3 14-3-3 protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.190.20 Mainly Alpha Up-down Bundle Delta-Endotoxin; domain 1 14-3-3 domain 4hkcA00
5LVZA 2O02A 5IQPA 2C74A 4DHPA 1A37A 3T0LA 4DX0A 2B05A 3P1NA 4N84A 5LU2A 4DHNA 2O8PA 4O46A 4DHMA 3M50A 4JC3A 5EWZA 3IQJA 4N7YA 3P1SA 3SMOA 4IEAA 1IB1A 3O8IA 4Y5IA 3P1OA 4DHTA 4ZQ0A 4J6SA 1YWTA 4DNKA 5HF3A 4BG6A 2C63A 3EFZA 3UX0A 4DAUA 5BTVA 2C1NA 3MHRA 2NPMA 3NKXA 4GNTA 4HKCA 4WRQA 3M51A 3UALA 3P1PA 2V7DA 5LX2A 5LU1A 5D3EA 4JDDA 3AXYC 3IQVA 5J31A 3RDHA 1O9DA 1O9FA 3SP5A 4DHOA 4DHSA 3SPRA 3CU8A 3UZDA 5EXAA 4DHRA 1O9CA 4Y32A 4DATA 4E2EA 4IHLA 3LW1A 4DHQA 5D2DA 3E6YA 2BTPA 3SMKA 4Y3BA 5BY9A 2C1JA 3IQUA 4FL5A 4F7RA 4DHUA 5LHOA 1O9EA 1A4OA 1QJAA 2WH0A 1QJBA 4FR3A 4QLIA 4ZDRA 4N7GA 5D3FA 3SMLA 3UBWA 2BQ0A 3T0MA 2BR9A 2O98A 4FJ3A 3SMMA 3P1QA 3U9XA 3SMNA 3P1RA 2C23A 5F74A 1YZ5A 1A38A
chains in the Genus database with same CATH superfamily
5LVZA 2O02A 5IQPA 4QX0A 2C74A 4DHPA 1A37A 3T0LA 4DX0A 2B05A 3P1NA 4N84A 3I4RA 5LU2A 4DHNA 2O8PA 4O46A 4DHMA 3M50A 4JC3A 1JI6A 5EWZA 3CQGA 4N7YA 3IQJA 4MOAA 3P1SA 3SMOA 4IEAA 1IB1A 3O8IA 2C9KA 1W99A 4Y5IA 3P1OA 4DHTA 4ZQ0A 4J6SA 1YWTA 4DNKA 5HF3A 4ARYA 4BG6A 2C63A 3EFZA 3UX0A 4DAUA 1I5PA 5BTVA 2C1NA 3MHRA 2NPMA 3NKXA 4GNTA 4HKCA 4WRQA 3M51A 3UALA 3P1PA 2V7DA 5LX2A 5LU1A 1DLCA 3X0UA 5D3EA 4JDDA 3AXYC 3IQVA 5J31A 3RDHA 1O9DA 1O9FA 3SP5A 4DHOA 4DHSA 3SPRA 3CU8A 4QX1A 3UZDA 5EXAA 4DHRA 1O9CA 4Y32A 4DATA 4E2EA 4IHLA 3LW1A 4DHQA 5D2DA 3E6YA 2BTPA 3SMKA 4Y3BA 5BY9A 1CIYA 2C1JA 1URJA 3IQUA 4FL5A 4F7RA 4DHUA 5LHOA 4QX3A 1O9EA 1A4OA 4W8JA 1QJAA 4ARXA 2WH0A 1QJBA 4FR3A 4QLIA 4ZDRA 3EB7A 1S2XA 4N7GA 5D3FA 3SMLA 3UBWA 2BQ0A 3T0MA 2BR9A 4D8MA 2O98A 4FJ3A 3SMMA 3ZHEB 3P1QA 3U9XA 3SMNA 3CQCA 3P1RA 2C23A 5F74A 4QX2A 1YZ5A 1A38A
chains in the Genus database with same CATH topology
5LVZA 2O02A 5IQPA 2C74A 4DHPA 1A37A 3T0LA 4DX0A 2B05A 3P1NA 4N84A 5LU2A 4DHNA 2O8PA 4O46A 4DHMA 3M50A 4JC3A 5EWZA 3IQJA 4N7YA 3P1SA 3SMOA 4IEAA 1IB1A 3O8IA 4Y5IA 3P1OA 4DHTA 4ZQ0A 4J6SA 1YWTA 4DNKA 5HF3A 4BG6A 2C63A 3EFZA 3UX0A 4DAUA 5BTVA 2C1NA 3MHRA 2NPMA 3NKXA 4GNTA 4HKCA 4WRQA 3M51A 3UALA 3P1PA 2V7DA 5LX2A 5LU1A 5D3EA 4JDDA 3AXYC 3IQVA 5J31A 3RDHA 1O9DA 1O9FA 3SP5A 4DHOA 4DHSA 3SPRA 3CU8A 3UZDA 5EXAA 4DHRA 1O9CA 4Y32A 4DATA 4E2EA 4IHLA 3LW1A 4DHQA 5D2DA 3E6YA 2BTPA 3SMKA 4Y3BA 5BY9A 2C1JA 3IQUA 4FL5A 4F7RA 4DHUA 5LHOA 1O9EA 1A4OA 1QJAA 2WH0A 1QJBA 4FR3A 4QLIA 4ZDRA 4N7GA 5D3FA 3SMLA 3UBWA 2BQ0A 3T0MA 2BR9A 2O98A 4FJ3A 3SMMA 3P1QA 3U9XA 3SMNA 3P1RA 2C23A 5F74A 1YZ5A 1A38A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5LVZ A;  2O02 A;  5IQP A;  2C74 A;  4DHP A;  1A37 A;  3T0L A;  4DX0 A;  2B05 A;  3P1N A;  4N84 A;  5LU2 A;  4DHN A;  2O8P A;  4O46 A;  4DHM A;  3M50 A;  4JC3 A;  5EWZ A;  3IQJ A;  4N7Y A;  3P1S A;  3SMO A;  4IEA A;  1IB1 A;  3O8I A;  4Y5I A;  3P1O A;  4DHT A;  4ZQ0 A;  4J6S A;  1YWT A;  4DNK A;  5HF3 A;  4BG6 A;  2C63 A;  3EFZ A;  3UX0 A;  4DAU A;  5BTV A;  2C1N A;  3MHR A;  2NPM A;  3NKX A;  4GNT A;  4HKC A;  4WRQ A;  3M51 A;  3UAL A;  3P1P A;  2V7D A;  5LX2 A;  5LU1 A;  5D3E A;  4JDD A;  3AXY C;  3IQV A;  5J31 A;  3RDH A;  1O9D A;  1O9F A;  3SP5 A;  4DHO A;  4DHS A;  3SPR A;  3CU8 A;  3UZD A;  5EXA A;  4DHR A;  1O9C A;  4Y32 A;  4DAT A;  4E2E A;  4IHL A;  3LW1 A;  4DHQ A;  5D2D A;  3E6Y A;  2BTP A;  3SMK A;  4Y3B A;  5BY9 A;  2C1J A;  3IQU A;  4FL5 A;  4F7R A;  4DHU A;  5LHO A;  1O9E A;  1A4O A;  1QJA A;  2WH0 A;  1QJB A;  4FR3 A;  4QLI A;  4ZDR A;  4N7G A;  5D3F A;  3SML A;  3UBW A;  2BQ0 A;  3T0M A;  2BR9 A;  2O98 A;  4FJ3 A;  3SMM A;  3P1Q A;  3U9X A;  3SMN A;  3P1R A;  2C23 A;  5F74 A;  1YZ5 A;  1A38 A; 
#chains in the Genus database with same CATH topology
 5LVZ A;  2O02 A;  5IQP A;  4QX0 A;  2C74 A;  4DHP A;  1A37 A;  3T0L A;  4DX0 A;  2B05 A;  3P1N A;  4N84 A;  3I4R A;  5LU2 A;  4DHN A;  2O8P A;  4O46 A;  4DHM A;  3M50 A;  4JC3 A;  1JI6 A;  5EWZ A;  3CQG A;  4N7Y A;  3IQJ A;  4MOA A;  3P1S A;  3SMO A;  4IEA A;  1IB1 A;  3O8I A;  2C9K A;  1W99 A;  4Y5I A;  3P1O A;  4DHT A;  4ZQ0 A;  4J6S A;  1YWT A;  4DNK A;  5HF3 A;  4ARY A;  4BG6 A;  2C63 A;  3EFZ A;  3UX0 A;  4DAU A;  1I5P A;  5BTV A;  2C1N A;  3MHR A;  2NPM A;  3NKX A;  4GNT A;  4HKC A;  4WRQ A;  3M51 A;  3UAL A;  3P1P A;  2V7D A;  5LX2 A;  5LU1 A;  1DLC A;  3X0U A;  5D3E A;  4JDD A;  3AXY C;  3IQV A;  5J31 A;  3RDH A;  1O9D A;  1O9F A;  3SP5 A;  4DHO A;  4DHS A;  3SPR A;  3CU8 A;  4QX1 A;  3UZD A;  5EXA A;  4DHR A;  1O9C A;  4Y32 A;  4DAT A;  4E2E A;  4IHL A;  3LW1 A;  4DHQ A;  5D2D A;  3E6Y A;  2BTP A;  3SMK A;  4Y3B A;  5BY9 A;  1CIY A;  2C1J A;  1URJ A;  3IQU A;  4FL5 A;  4F7R A;  4DHU A;  5LHO A;  4QX3 A;  1O9E A;  1A4O A;  4W8J A;  1QJA A;  4ARX A;  2WH0 A;  1QJB A;  4FR3 A;  4QLI A;  4ZDR A;  3EB7 A;  1S2X A;  4N7G A;  5D3F A;  3SML A;  3UBW A;  2BQ0 A;  3T0M A;  2BR9 A;  4D8M A;  2O98 A;  4FJ3 A;  3SMM A;  3ZHE B;  3P1Q A;  3U9X A;  3SMN A;  3CQC A;  3P1R A;  2C23 A;  5F74 A;  4QX2 A;  1YZ5 A;  1A38 A; 
#chains in the Genus database with same CATH homology
 5LVZ A;  2O02 A;  5IQP A;  2C74 A;  4DHP A;  1A37 A;  3T0L A;  4DX0 A;  2B05 A;  3P1N A;  4N84 A;  5LU2 A;  4DHN A;  2O8P A;  4O46 A;  4DHM A;  3M50 A;  4JC3 A;  5EWZ A;  3IQJ A;  4N7Y A;  3P1S A;  3SMO A;  4IEA A;  1IB1 A;  3O8I A;  4Y5I A;  3P1O A;  4DHT A;  4ZQ0 A;  4J6S A;  1YWT A;  4DNK A;  5HF3 A;  4BG6 A;  2C63 A;  3EFZ A;  3UX0 A;  4DAU A;  5BTV A;  2C1N A;  3MHR A;  2NPM A;  3NKX A;  4GNT A;  4HKC A;  4WRQ A;  3M51 A;  3UAL A;  3P1P A;  2V7D A;  5LX2 A;  5LU1 A;  5D3E A;  4JDD A;  3AXY C;  3IQV A;  5J31 A;  3RDH A;  1O9D A;  1O9F A;  3SP5 A;  4DHO A;  4DHS A;  3SPR A;  3CU8 A;  3UZD A;  5EXA A;  4DHR A;  1O9C A;  4Y32 A;  4DAT A;  4E2E A;  4IHL A;  3LW1 A;  4DHQ A;  5D2D A;  3E6Y A;  2BTP A;  3SMK A;  4Y3B A;  5BY9 A;  2C1J A;  3IQU A;  4FL5 A;  4F7R A;  4DHU A;  5LHO A;  1O9E A;  1A4O A;  1QJA A;  2WH0 A;  1QJB A;  4FR3 A;  4QLI A;  4ZDR A;  4N7G A;  5D3F A;  3SML A;  3UBW A;  2BQ0 A;  3T0M A;  2BR9 A;  2O98 A;  4FJ3 A;  3SMM A;  3P1Q A;  3U9X A;  3SMN A;  3P1R A;  2C23 A;  5F74 A;  1YZ5 A;  1A38 A; 
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similar chains in the pdb database (?% sequence similarity)

 
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