4HKMA

Crystal structure of an anthranilate phosphoribosyltransferase (target id nysgrc-016600) from xanthomonas campestris
Total Genus 101
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
101
sequence length
342
structure length
318
Chain Sequence
PITPQQALQRTIEHREIFHDEMVDLMRQIMRGEVSDAMVSAILTGLRVKKETIGEIAGAATVMREFSRRVEVTDRRHMVDIVGTTFNISTCAMFVAAAGGAKVAKHGSADALEALGAVIELQPEQVAASLAQTGIGFMYAPVHHPAMKVVAPVRREMGVRTIFNILGPLTNPAGSPNILMGVFHPDLVGIQARVLQELGAERALVVWGRDGMDELSLGAGTLVGELRDGQVHEYEVHPEDFGIAMSAAESRAMLLQVLDNVPGPALDIVALNAGAALYVAGVADSIADGIVRARQVLADGSARACLDAYVAFTQQATA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords Anthranilate phosphoribosyltransferase
publication title Crystal Structure of an Anthranilate Phosphoribosyltransferase (target ID NYSGRC-016600) from Xanthomonas campestris
rcsb
source organism Xanthomonas campestris pv. campestris
total genus 101
structure length 318
sequence length 342
chains with identical sequence B
ec nomenclature ec 2.4.2.18: Anthranilate phosphoribosyltransferase.
pdb deposition date 2012-10-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00591 Glycos_transf_3 Glycosyl transferase family, a/b domain
A PF02885 Glycos_trans_3N Glycosyl transferase family, helical bundle domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.970.10 Mainly Alpha Up-down Bundle Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 4hkmA01
3.40.1030.10 Alpha Beta 3-Layer(aba) Sandwich Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 4hkmA02
4GA6A 4YYYA 4HKMA 4OWQA 2J0FA 3QQSA 4X5DA 5C1RA 3R88A 5BYTA 4ZTVA 4N8QA 1AZYA 1UOUA 4MUOA 4X58A 4XR5A 4ZOJA 3GBRA 4EAFA 1KHDA 3H5QA 4OWVA 4OWSA 2GVQA 5BO2A 5EY3A 4GA5A 2BPQA 2DSJA 4ZOKA 2WK5A 4X5BA 4X5AA 4OWNA 4GA4A 3TWPA 3UU1A 4IJ1A 4LHMA 3QSAA 4OWMA 1OTPA 4YI7A 4ZOFA 4X5CA 4X46A 4GIUA 1KGZA 4GTNA 1ZYKA 3QR9A 1BRWA 1GXBA 1V8GA 4M0RA 1VQUA 3QS8A 4EADA 4OWUA 1O17A 2ELCA 4X5EA 1ZVWA 4YEKA 4OWOA 4N5VA 3R6CA 2WK6A 5C2LA 5BO3A 1ZXYA 5EP8A 2TPTA 4GKMA 5BNEA 4N93A 5C7SA 4X59A
chains in the Genus database with same CATH superfamily
1RRZA 4GA6A 4YYYA 4HKMA 4OWQA 2J0FA 3QQSA 4X5DA 5C1RA 3R88A 5BYTA 4ZTVA 4N8QA 1UOUA 1AZYA 4MUOA 4X58A 4XR5A 4ZOJA 3GBRA 4EAFA 1KHDA 3H5QA 4OWVA 4OWSA 2GVQA 5BO2A 5EY3A 4GA5A 2BPQA 2DSJA 4ZOKA 2WK5A 4X5BA 4X5AA 4OWNA 4GA4A 3TWPA 3UU1A 4IJ1A 4LHMA 3QSAA 4OWMA 1OTPA 4YI7A 4ZOFA 4X5CA 4X46A 4GIUA 4F3FC 1KGZA 4GTNA 1ZYKA 3QR9A 1BRWA 1GXBA 1V8GA 4M0RA 1VQUA 3QS8A 4EADA 4OWUA 1O17A 2ELCA 4X5EA 1ZVWA 1RF8B 4YEKA 4OWOA 4N5VA 3R6CA 2WK6A 5C2LA 5BO3A 1ZXYA 5EP8A 2TPTA 4GKMA 5BNEA 4N93A 5C7SA 4X59A
chains in the Genus database with same CATH topology
4GA6A 4YYYA 4HKMA 4OWQA 2J0FA 3QQSA 4X5DA 5C1RA 3R88A 5BYTA 4ZTVA 4N8QA 1AZYA 1UOUA 4MUOA 4X58A 4XR5A 4ZOJA 3GBRA 4EAFA 1KHDA 3H5QA 4OWVA 4OWSA 2GVQA 5BO2A 5EY3A 4GA5A 2BPQA 2DSJA 4ZOKA 2WK5A 4X5BA 4X5AA 4OWNA 4GA4A 3TWPA 3UU1A 4IJ1A 4LHMA 3QSAA 4OWMA 1OTPA 4YI7A 4ZOFA 4X5CA 4X46A 4GIUA 1KGZA 4GTNA 1ZYKA 3QR9A 1BRWA 1GXBA 1V8GA 4M0RA 1VQUA 3QS8A 4EADA 4OWUA 1O17A 2ELCA 4X5EA 1ZVWA 4YEKA 4OWOA 4N5VA 3R6CA 2WK6A 5C2LA 5BO3A 1ZXYA 5EP8A 2TPTA 4GKMA 5BNEA 4N93A 5C7SA 4X59A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4GA6 A;  4YYY A;  4HKM A;  4OWQ A;  2J0F A;  3QQS A;  4X5D A;  5C1R A;  3R88 A;  5BYT A;  4ZTV A;  4N8Q A;  1AZY A;  1UOU A;  4MUO A;  4X58 A;  4XR5 A;  4ZOJ A;  3GBR A;  4EAF A;  1KHD A;  3H5Q A;  4OWV A;  4OWS A;  2GVQ A;  5BO2 A;  5EY3 A;  4GA5 A;  2BPQ A;  2DSJ A;  4ZOK A;  2WK5 A;  4X5B A;  4X5A A;  4OWN A;  4GA4 A;  3TWP A;  3UU1 A;  4IJ1 A;  4LHM A;  3QSA A;  4OWM A;  1OTP A;  4YI7 A;  4ZOF A;  4X5C A;  4X46 A;  4GIU A;  1KGZ A;  4GTN A;  1ZYK A;  3QR9 A;  1BRW A;  1GXB A;  1V8G A;  4M0R A;  1VQU A;  3QS8 A;  4EAD A;  4OWU A;  1O17 A;  2ELC A;  4X5E A;  1ZVW A;  4YEK A;  4OWO A;  4N5V A;  3R6C A;  2WK6 A;  5C2L A;  5BO3 A;  1ZXY A;  5EP8 A;  2TPT A;  4GKM A;  5BNE A;  4N93 A;  5C7S A;  4X59 A; 
#chains in the Genus database with same CATH topology
 1RRZ A;  4GA6 A;  4YYY A;  4HKM A;  4OWQ A;  2J0F A;  3QQS A;  4X5D A;  5C1R A;  3R88 A;  5BYT A;  4ZTV A;  4N8Q A;  1UOU A;  1AZY A;  4MUO A;  4X58 A;  4XR5 A;  4ZOJ A;  3GBR A;  4EAF A;  1KHD A;  3H5Q A;  4OWV A;  4OWS A;  2GVQ A;  5BO2 A;  5EY3 A;  4GA5 A;  2BPQ A;  2DSJ A;  4ZOK A;  2WK5 A;  4X5B A;  4X5A A;  4OWN A;  4GA4 A;  3TWP A;  3UU1 A;  4IJ1 A;  4LHM A;  3QSA A;  4OWM A;  1OTP A;  4YI7 A;  4ZOF A;  4X5C A;  4X46 A;  4GIU A;  4F3F C;  1KGZ A;  4GTN A;  1ZYK A;  3QR9 A;  1BRW A;  1GXB A;  1V8G A;  4M0R A;  1VQU A;  3QS8 A;  4EAD A;  4OWU A;  1O17 A;  2ELC A;  4X5E A;  1ZVW A;  1RF8 B;  4YEK A;  4OWO A;  4N5V A;  3R6C A;  2WK6 A;  5C2L A;  5BO3 A;  1ZXY A;  5EP8 A;  2TPT A;  4GKM A;  5BNE A;  4N93 A;  5C7S A;  4X59 A; 
#chains in the Genus database with same CATH homology
 4GA6 A;  4YYY A;  4HKM A;  4OWQ A;  2J0F A;  3QQS A;  4X5D A;  5C1R A;  3R88 A;  5BYT A;  4ZTV A;  4N8Q A;  1AZY A;  1UOU A;  4MUO A;  4X58 A;  4XR5 A;  4ZOJ A;  3GBR A;  4EAF A;  1KHD A;  3H5Q A;  4OWV A;  4OWS A;  2GVQ A;  5BO2 A;  5EY3 A;  4GA5 A;  2BPQ A;  2DSJ A;  4ZOK A;  2WK5 A;  4X5B A;  4X5A A;  4OWN A;  4GA4 A;  3TWP A;  3UU1 A;  4IJ1 A;  4LHM A;  3QSA A;  4OWM A;  1OTP A;  4YI7 A;  4ZOF A;  4X5C A;  4X46 A;  4GIU A;  1KGZ A;  4GTN A;  1ZYK A;  3QR9 A;  1BRW A;  1GXB A;  1V8G A;  4M0R A;  1VQU A;  3QS8 A;  4EAD A;  4OWU A;  1O17 A;  2ELC A;  4X5E A;  1ZVW A;  4YEK A;  4OWO A;  4N5V A;  3R6C A;  2WK6 A;  5C2L A;  5BO3 A;  1ZXY A;  5EP8 A;  2TPT A;  4GKM A;  5BNE A;  4N93 A;  5C7S A;  4X59 A; 
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similar chains in the Genus database (?% sequence similarity)
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