4HMVA

Crystal structure of phzg from pseudomonas fluorescens 2-79 in complex with tetrahydrophenazine-1-carboxylic acid after 5 days of soaking
Total Genus 53
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
53
sequence length
202
structure length
202
Chain Sequence
GTLDAPFPEYQTLPADPMSVLHNWLERARRVGIREPRALALATADSQGRPSTRIVVISEISDAGVVFSTHAGSQKGRELLHNPWASGVLYWRETSQQIILNGQAVRLPNAKADDAWLKRPYATHPMSSVSRQSEELQDVQAMRNAARQLAELQGPLPRPEGYCVFELRLESLEFWGNGQERLHERLRYDRSDTGWNVRRLQP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase
molecule keywords Phenazine biosynthesis protein phzG
publication title Trapped intermediates in crystals of the FMN-dependent oxidase PhzG provide insight into the final steps of phenazine biosynthesis
pubmed doi rcsb
source organism Pseudomonas fluorescens
total genus 53
structure length 202
sequence length 202
chains with identical sequence B
ec nomenclature ec 1.4.-.-:
pdb deposition date 2012-10-18

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01243 Putative_PNPOx Pyridoxamine 5'-phosphate oxidase
A PF10590 PNP_phzG_C Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.110.10 Mainly Beta Roll Pnp Oxidase; Chain A Electron Transport, Fmn-binding Protein; Chain A 4hmvA00
2QCKA 1G76A 2D5MA 2OU5A 3VY2A 5CHEC 4XJ2A 2Q9KA 3R5LA 4YBNA 3RH7A 2AQ6A 1W3QA 3HY8A 3U0IA 3AWHA 2ECRA 3ZOHA 2RE7A 2R0XA 3ZOGA 3R5ZA 1USCA 1WV4A 2IMLA 3SWJA 3A6RA 1I0SA 2D37A 1W3RA 4YWNA 3A6QA 4ZKYA 3BA3A 2HTIA 3DMBA 1T9MA 2PTFA 1RZ0A 1G78A 4Z85A 3FKHA 1VL7A 3KYGA 4HMSA 2E83A 3VYAA 1Y30A 1WGBA 1WLIA 3R5YA 3ZOFA 3VY5A 3FGEA 2FG9A 3F7EA 3DB0A 1NRGA 4HMXA 2ED4A 3A20A 3IN6A 2ARZA 1I0RA 2X1KA 4QVBA 1FLMA 3BPKA 3H96A 4Y9IA 3U34A 5JABA 1TY9A 4HMUA 1XXOA 2OL5A 1XHNA 3K86A 2VPAA 4HMVA 4L82A 3HMZA 2GJGA 2NR4A 4IRAA 3TGVA 1G77A 2IG6A 1USFA 2R6VA 4HMWA 3ZODA 3R5PA 3R5RA 2D38A 2HTDA 5ESCA 2FURA 4N7RC 2I02A 3B5MA 2RDEA 3R5WA 2HQ9A 1CI0A 2HHZA 1YOAA 1RZ1A 2A2JA 2X1JA 5BNCA 1AXJA 1DNLA 1W9AA 3BNKA 3NFWA 2HQ7A 2FHQA 3E4VA 3EC6A 1G79A 2ASFA 1RFEA 1YLNA 3K87A 3K88A 1WLKA 5CHOA 3KYFA 4R82A 1W3OA 4HMTA 3ZOEA 3CP3A 3U5WA 2QEAA 3U35A 2I51A 3AMFA 2D36A 1W3PA 1JNWA 3PFTA 3CB0A 4F07A 2ECUA 2IABA 4XHYA 3DNHA 3GASA 1EJEA 4HX6A 3ZOCA
chains in the Genus database with same CATH superfamily
2QCKA 1G76A 2D5MA 2P5ZX 2OU5A 3VY2A 5CHEC 4XJ2A 2Q9KA 3R5LA 4HKHA 4YBNA 3RH7A 2AQ6A 4UHVA 1W3QA 3HY8A 3U0IA 4TV4A 3AWHA 2ECRA 3ZOHA 2RE7A 2R0XA 3ZOGA 3R5ZA 1USCA 1WV4A 2IMLA 3SWJA 3A6RA 1I0SA 2D37A 1W3RA 4YWNA 3A6QA 4ZKYA 3BA3A 2HTIA 3DMBA 1T9MA 2PTFA 1RZ0A 1G78A 1Y12A 4Z85A 3FKHA 1VL7A 3KYGA 4HMSA 2E83A 2K4QA 1Y30A 1WGBA 1WLIA 3R5YA 3VYAA 3ZOFA 3V4HA 3VY5A 3FGEA 2FG9A 3F7EA 4MTKA 3DB0A 2L1TA 1NRGA 4HMXA 2GUJA 2ED4A 3A20A 3IN6A 2ARZA 1I0RA 2X1KA 4QVBA 1FLMA 3BPKA 3H96A 4Y9IA 3U34A 5JABA 1TY9A 4HMUA 3HE1A 1XXOA 2OL5A 1XHNA 3K86A 2VPAA 4HMVA 4L82A 3HMZA 2GJGA 2NR4A 4IRAA 3TGVA 1G77A 4W64A 2IG6A 1USFA 2R6VA 4HMWA 3ZODA 3R5PA 3R5RA 2D38A 2HTDA 5ESCA 2FURA 4N7RC 2I02A 3B5MA 2RDEA 3R5WA 2HQ9A 1CI0A 2HHZA 1YOAA 1RZ1A 2A2JA 2X1JA 5BNCA 1AXJA 1DNLA 1W9AA 3BNKA 3NFWA 2HQ7A 2FHQA 3E4VA 3EC6A 1G79A 2ASFA 1RFEA 1YLNA 3K87A 3K88A 1WLKA 5CHOA 3KYFA 4R82A 1W3OA 4HMTA 3ZOEA 3CP3A 3U5WA 2QEAA 3U35A 2I51A 3EAAA 3AMFA 2D36A 1W3PA 1JNWA 3PFTA 3CB0A 4F07A 2ECUA 2IABA 4XHYA 3DNHA 3GASA 1EJEA 4HX6A 3ZOCA
chains in the Genus database with same CATH topology
2QCKA 1G76A 2D5MA 2OU5A 3VY2A 5CHEC 4XJ2A 2Q9KA 3R5LA 4YBNA 3RH7A 2AQ6A 1W3QA 3HY8A 3U0IA 3AWHA 2ECRA 3ZOHA 2RE7A 2R0XA 3ZOGA 3R5ZA 1USCA 1WV4A 2IMLA 3SWJA 3A6RA 1I0SA 2D37A 1W3RA 4YWNA 3A6QA 4ZKYA 3BA3A 2HTIA 3DMBA 1T9MA 2PTFA 1RZ0A 1G78A 4Z85A 3FKHA 1VL7A 3KYGA 4HMSA 2E83A 3VYAA 1Y30A 1WGBA 1WLIA 3R5YA 3ZOFA 3VY5A 3FGEA 2FG9A 3F7EA 3DB0A 1NRGA 4HMXA 2ED4A 3A20A 3IN6A 2ARZA 1I0RA 2X1KA 4QVBA 1FLMA 3BPKA 3H96A 4Y9IA 3U34A 5JABA 1TY9A 4HMUA 1XXOA 2OL5A 1XHNA 3K86A 2VPAA 4HMVA 4L82A 3HMZA 2GJGA 2NR4A 4IRAA 3TGVA 1G77A 2IG6A 1USFA 2R6VA 4HMWA 3ZODA 3R5PA 3R5RA 2D38A 2HTDA 5ESCA 2FURA 4N7RC 2I02A 3B5MA 2RDEA 3R5WA 2HQ9A 1CI0A 2HHZA 1YOAA 1RZ1A 2A2JA 2X1JA 5BNCA 1AXJA 1DNLA 1W9AA 3BNKA 3NFWA 2HQ7A 2FHQA 3E4VA 3EC6A 1G79A 2ASFA 1RFEA 1YLNA 3K87A 3K88A 1WLKA 5CHOA 3KYFA 4R82A 1W3OA 4HMTA 3ZOEA 3CP3A 3U5WA 2QEAA 3U35A 2I51A 3AMFA 2D36A 1W3PA 1JNWA 3PFTA 3CB0A 4F07A 2ECUA 2IABA 4XHYA 3DNHA 3GASA 1EJEA 4HX6A 3ZOCA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2QCK A;  1G76 A;  2D5M A;  2OU5 A;  3VY2 A;  5CHE C;  4XJ2 A;  2Q9K A;  3R5L A;  4YBN A;  3RH7 A;  2AQ6 A;  1W3Q A;  3HY8 A;  3U0I A;  3AWH A;  2ECR A;  3ZOH A;  2RE7 A;  2R0X A;  3ZOG A;  3R5Z A;  1USC A;  1WV4 A;  2IML A;  3SWJ A;  3A6R A;  1I0S A;  2D37 A;  1W3R A;  4YWN A;  3A6Q A;  4ZKY A;  3BA3 A;  2HTI A;  3DMB A;  1T9M A;  2PTF A;  1RZ0 A;  1G78 A;  4Z85 A;  3FKH A;  1VL7 A;  3KYG A;  4HMS A;  2E83 A;  3VYA A;  1Y30 A;  1WGB A;  1WLI A;  3R5Y A;  3ZOF A;  3VY5 A;  3FGE A;  2FG9 A;  3F7E A;  3DB0 A;  1NRG A;  4HMX A;  2ED4 A;  3A20 A;  3IN6 A;  2ARZ A;  1I0R A;  2X1K A;  4QVB A;  1FLM A;  3BPK A;  3H96 A;  4Y9I A;  3U34 A;  5JAB A;  1TY9 A;  4HMU A;  1XXO A;  2OL5 A;  1XHN A;  3K86 A;  2VPA A;  4HMV A;  4L82 A;  3HMZ A;  2GJG A;  2NR4 A;  4IRA A;  3TGV A;  1G77 A;  2IG6 A;  1USF A;  2R6V A;  4HMW A;  3ZOD A;  3R5P A;  3R5R A;  2D38 A;  2HTD A;  5ESC A;  2FUR A;  4N7R C;  2I02 A;  3B5M A;  2RDE A;  3R5W A;  2HQ9 A;  1CI0 A;  2HHZ A;  1YOA A;  1RZ1 A;  2A2J A;  2X1J A;  5BNC A;  1AXJ A;  1DNL A;  1W9A A;  3BNK A;  3NFW A;  2HQ7 A;  2FHQ A;  3E4V A;  3EC6 A;  1G79 A;  2ASF A;  1RFE A;  1YLN A;  3K87 A;  3K88 A;  1WLK A;  5CHO A;  3KYF A;  4R82 A;  1W3O A;  4HMT A;  3ZOE A;  3CP3 A;  3U5W A;  2QEA A;  3U35 A;  2I51 A;  3AMF A;  2D36 A;  1W3P A;  1JNW A;  3PFT A;  3CB0 A;  4F07 A;  2ECU A;  2IAB A;  4XHY A;  3DNH A;  3GAS A;  1EJE A;  4HX6 A;  3ZOC A; 
#chains in the Genus database with same CATH topology
 2QCK A;  1G76 A;  2D5M A;  2P5Z X;  2OU5 A;  3VY2 A;  5CHE C;  4XJ2 A;  2Q9K A;  3R5L A;  4HKH A;  4YBN A;  3RH7 A;  2AQ6 A;  4UHV A;  1W3Q A;  3HY8 A;  3U0I A;  4TV4 A;  3AWH A;  2ECR A;  3ZOH A;  2RE7 A;  2R0X A;  3ZOG A;  3R5Z A;  1USC A;  1WV4 A;  2IML A;  3SWJ A;  3A6R A;  1I0S A;  2D37 A;  1W3R A;  4YWN A;  3A6Q A;  4ZKY A;  3BA3 A;  2HTI A;  3DMB A;  1T9M A;  2PTF A;  1RZ0 A;  1G78 A;  1Y12 A;  4Z85 A;  3FKH A;  1VL7 A;  3KYG A;  4HMS A;  2E83 A;  2K4Q A;  1Y30 A;  1WGB A;  1WLI A;  3R5Y A;  3VYA A;  3ZOF A;  3V4H A;  3VY5 A;  3FGE A;  2FG9 A;  3F7E A;  4MTK A;  3DB0 A;  2L1T A;  1NRG A;  4HMX A;  2GUJ A;  2ED4 A;  3A20 A;  3IN6 A;  2ARZ A;  1I0R A;  2X1K A;  4QVB A;  1FLM A;  3BPK A;  3H96 A;  4Y9I A;  3U34 A;  5JAB A;  1TY9 A;  4HMU A;  3HE1 A;  1XXO A;  2OL5 A;  1XHN A;  3K86 A;  2VPA A;  4HMV A;  4L82 A;  3HMZ A;  2GJG A;  2NR4 A;  4IRA A;  3TGV A;  1G77 A;  4W64 A;  2IG6 A;  1USF A;  2R6V A;  4HMW A;  3ZOD A;  3R5P A;  3R5R A;  2D38 A;  2HTD A;  5ESC A;  2FUR A;  4N7R C;  2I02 A;  3B5M A;  2RDE A;  3R5W A;  2HQ9 A;  1CI0 A;  2HHZ A;  1YOA A;  1RZ1 A;  2A2J A;  2X1J A;  5BNC A;  1AXJ A;  1DNL A;  1W9A A;  3BNK A;  3NFW A;  2HQ7 A;  2FHQ A;  3E4V A;  3EC6 A;  1G79 A;  2ASF A;  1RFE A;  1YLN A;  3K87 A;  3K88 A;  1WLK A;  5CHO A;  3KYF A;  4R82 A;  1W3O A;  4HMT A;  3ZOE A;  3CP3 A;  3U5W A;  2QEA A;  3U35 A;  2I51 A;  3EAA A;  3AMF A;  2D36 A;  1W3P A;  1JNW A;  3PFT A;  3CB0 A;  4F07 A;  2ECU A;  2IAB A;  4XHY A;  3DNH A;  3GAS A;  1EJE A;  4HX6 A;  3ZOC A; 
#chains in the Genus database with same CATH homology
 2QCK A;  1G76 A;  2D5M A;  2OU5 A;  3VY2 A;  5CHE C;  4XJ2 A;  2Q9K A;  3R5L A;  4YBN A;  3RH7 A;  2AQ6 A;  1W3Q A;  3HY8 A;  3U0I A;  3AWH A;  2ECR A;  3ZOH A;  2RE7 A;  2R0X A;  3ZOG A;  3R5Z A;  1USC A;  1WV4 A;  2IML A;  3SWJ A;  3A6R A;  1I0S A;  2D37 A;  1W3R A;  4YWN A;  3A6Q A;  4ZKY A;  3BA3 A;  2HTI A;  3DMB A;  1T9M A;  2PTF A;  1RZ0 A;  1G78 A;  4Z85 A;  3FKH A;  1VL7 A;  3KYG A;  4HMS A;  2E83 A;  3VYA A;  1Y30 A;  1WGB A;  1WLI A;  3R5Y A;  3ZOF A;  3VY5 A;  3FGE A;  2FG9 A;  3F7E A;  3DB0 A;  1NRG A;  4HMX A;  2ED4 A;  3A20 A;  3IN6 A;  2ARZ A;  1I0R A;  2X1K A;  4QVB A;  1FLM A;  3BPK A;  3H96 A;  4Y9I A;  3U34 A;  5JAB A;  1TY9 A;  4HMU A;  1XXO A;  2OL5 A;  1XHN A;  3K86 A;  2VPA A;  4HMV A;  4L82 A;  3HMZ A;  2GJG A;  2NR4 A;  4IRA A;  3TGV A;  1G77 A;  2IG6 A;  1USF A;  2R6V A;  4HMW A;  3ZOD A;  3R5P A;  3R5R A;  2D38 A;  2HTD A;  5ESC A;  2FUR A;  4N7R C;  2I02 A;  3B5M A;  2RDE A;  3R5W A;  2HQ9 A;  1CI0 A;  2HHZ A;  1YOA A;  1RZ1 A;  2A2J A;  2X1J A;  5BNC A;  1AXJ A;  1DNL A;  1W9A A;  3BNK A;  3NFW A;  2HQ7 A;  2FHQ A;  3E4V A;  3EC6 A;  1G79 A;  2ASF A;  1RFE A;  1YLN A;  3K87 A;  3K88 A;  1WLK A;  5CHO A;  3KYF A;  4R82 A;  1W3O A;  4HMT A;  3ZOE A;  3CP3 A;  3U5W A;  2QEA A;  3U35 A;  2I51 A;  3AMF A;  2D36 A;  1W3P A;  1JNW A;  3PFT A;  3CB0 A;  4F07 A;  2ECU A;  2IAB A;  4XHY A;  3DNH A;  3GAS A;  1EJE A;  4HX6 A;  3ZOC A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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