4HMVA

Crystal structure of phzg from pseudomonas fluorescens 2-79 in complex with tetrahydrophenazine-1-carboxylic acid after 5 days of soaking
Total Genus 53
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
53
sequence length
202
structure length
202
Chain Sequence
GTLDAPFPEYQTLPADPMSVLHNWLERARRVGIREPRALALATADSQGRPSTRIVVISEISDAGVVFSTHAGSQKGRELLHNPWASGVLYWRETSQQIILNGQAVRLPNAKADDAWLKRPYATHPMSSVSRQSEELQDVQAMRNAARQLAELQGPLPRPEGYCVFELRLESLEFWGNGQERLHERLRYDRSDTGWNVRRLQP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Trapped intermediates in crystals of the FMN-dependent oxidase PhzG provide insight into the final steps of phenazine biosynthesis
pubmed doi rcsb
molecule tags Oxidoreductase
source organism Pseudomonas fluorescens
molecule keywords Phenazine biosynthesis protein phzG
total genus 53
structure length 202
sequence length 202
chains with identical sequence B
ec nomenclature ec 1.4.-.-:
pdb deposition date 2012-10-18

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01243 Putative_PNPOx Pyridoxamine 5'-phosphate oxidase
A PF10590 PNP_phzG_C Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.110.10 Mainly Beta Roll Pnp Oxidase; Chain A Electron Transport, Fmn-binding Protein; Chain A 4hmvA00
3NFWA 2ED4A 2FG9A 5ESCA 2HTIA 1YLNA 3A6RA 4XJ2A 3VY5A 3AWHA 2RE7A 4YWNA 3FGEA 4HMVA 2HHZA 2ECUA 4HMWA 2GJGA 1USCA 3EC6A 3PFTA 1WGBA 3HMZA 3TGVA 3K87A 2R0XA 2D36A 2FHQA 3U0IA 3VYAA 2D5MA 2R6VA 3U34A 1G76A 2ASFA 2ECRA 3BPKA 2AQ6A 2E83A 1W3OA 1WLKA 3VY2A 1WLIA 3ZODA 3ZOEA 3HY8A 3B5MA 3GASA 3K88A 3R5ZA 2RDEA 2QCKA 3KYFA 1CI0A 2IABA 5JABA 1RZ1A 1Y30A 3A6QA 2FURA 1G79A 2NR4A 2I02A 3CP3A 1W3QA 3K86A 4F07A 4IRAA 1G77A 1I0RA 1NRGA 3FKHA 1I0SA 4R82A 1XHNA 3H96A 4Y9IA 3ZOGA 4HMSA 1RZ0A 4QVBA 4HMTA 3AMFA 1T9MA 2X1KA 3RH7A 3E4VA 4HX6A 4ZKYA 3SWJA 3DB0A 3DMBA 3R5LA 1FLMA 3F7EA 3KYGA 2D38A 3BA3A 3R5WA 2A2JA 4HMXA 2D37A 5CHEC 2I51A 3U5WA 1USFA 2Q9KA 1XXOA 2IMLA 1AXJA 2OL5A 3ZOCA 3CB0A 2OU5A 3ZOHA 5BNCA 1G78A 1TY9A 4XHYA 3ZOFA 2PTFA 3BNKA 1W9AA 3R5PA 2HTDA 3A20A 1W3RA 2ARZA 4N7RC 2IG6A 1EJEA 3IN6A 5CHOA 1JNWA 3R5YA 1YOAA 1DNLA 4L82A 3U35A 1WV4A 2QEAA 2X1JA 2HQ7A 2HQ9A 3R5RA 4HMUA 1RFEA 2VPAA 4YBNA 1VL7A 3DNHA 1W3PA 4Z85A
chains in the Genus database with same CATH superfamily
3NFWA 2ED4A 4TV4A 2FG9A 5ESCA 2HTIA 1YLNA 3A6RA 4XJ2A 3VY5A 3AWHA 2RE7A 4YWNA 3FGEA 4HMVA 2HHZA 2ECUA 4HMWA 2GJGA 1USCA 3EC6A 3PFTA 1WGBA 3HMZA 3TGVA 3K87A 2K4QA 2R0XA 2D36A 2FHQA 2L1TA 3U0IA 3VYAA 3V4HA 2D5MA 2R6VA 3U34A 1G76A 2ASFA 2ECRA 3BPKA 2AQ6A 2E83A 1W3OA 1WLKA 3VY2A 1WLIA 3ZODA 3ZOEA 3HY8A 3B5MA 3GASA 3K88A 3R5ZA 2RDEA 2QCKA 3KYFA 1CI0A 2IABA 4W64A 4UHVA 5JABA 1RZ1A 1Y30A 3A6QA 2FURA 1G79A 2NR4A 2I02A 3CP3A 1W3QA 3K86A 4F07A 4IRAA 1G77A 1I0RA 1NRGA 3FKHA 3HE1A 1I0SA 4R82A 1XHNA 3H96A 4Y9IA 3ZOGA 4HMSA 1RZ0A 4QVBA 4HMTA 3AMFA 1T9MA 2X1KA 3RH7A 3E4VA 4HX6A 3EAAA 4ZKYA 3SWJA 2P5ZX 3DB0A 3DMBA 3R5LA 1FLMA 3F7EA 3KYGA 2D38A 3BA3A 3R5WA 2A2JA 4HMXA 2GUJA 2D37A 5CHEC 2I51A 3U5WA 4MTKA 1USFA 2Q9KA 1XXOA 2IMLA 1AXJA 2OL5A 3ZOCA 3CB0A 2OU5A 3ZOHA 1Y12A 4HKHA 5BNCA 1G78A 1TY9A 4XHYA 3ZOFA 2PTFA 3BNKA 1W9AA 3R5PA 2HTDA 3A20A 1W3RA 2ARZA 4N7RC 2IG6A 1EJEA 3IN6A 5CHOA 1JNWA 3R5YA 1YOAA 1DNLA 4L82A 3U35A 1WV4A 2QEAA 2X1JA 2HQ7A 2HQ9A 3R5RA 4HMUA 1RFEA 2VPAA 4YBNA 1VL7A 3DNHA 1W3PA 4Z85A
chains in the Genus database with same CATH topology
3NFWA 2ED4A 2FG9A 5ESCA 2HTIA 1YLNA 3A6RA 4XJ2A 3VY5A 3AWHA 2RE7A 4YWNA 3FGEA 4HMVA 2HHZA 2ECUA 4HMWA 2GJGA 1USCA 3EC6A 3PFTA 1WGBA 3HMZA 3TGVA 3K87A 2R0XA 2D36A 2FHQA 3U0IA 3VYAA 2D5MA 2R6VA 3U34A 1G76A 2ASFA 2ECRA 3BPKA 2AQ6A 2E83A 1W3OA 1WLKA 3VY2A 1WLIA 3ZODA 3ZOEA 3HY8A 3B5MA 3GASA 3K88A 3R5ZA 2RDEA 2QCKA 3KYFA 1CI0A 2IABA 5JABA 1RZ1A 1Y30A 3A6QA 2FURA 1G79A 2NR4A 2I02A 3CP3A 1W3QA 3K86A 4F07A 4IRAA 1G77A 1I0RA 1NRGA 3FKHA 1I0SA 4R82A 1XHNA 3H96A 4Y9IA 3ZOGA 4HMSA 1RZ0A 4QVBA 4HMTA 3AMFA 1T9MA 2X1KA 3RH7A 3E4VA 4HX6A 4ZKYA 3SWJA 3DB0A 3DMBA 3R5LA 1FLMA 3F7EA 3KYGA 2D38A 3BA3A 3R5WA 2A2JA 4HMXA 2D37A 5CHEC 2I51A 3U5WA 1USFA 2Q9KA 1XXOA 2IMLA 1AXJA 2OL5A 3ZOCA 3CB0A 2OU5A 3ZOHA 5BNCA 1G78A 1TY9A 4XHYA 3ZOFA 2PTFA 3BNKA 1W9AA 3R5PA 2HTDA 3A20A 1W3RA 2ARZA 4N7RC 2IG6A 1EJEA 3IN6A 5CHOA 1JNWA 3R5YA 1YOAA 1DNLA 4L82A 3U35A 1WV4A 2QEAA 2X1JA 2HQ7A 2HQ9A 3R5RA 4HMUA 1RFEA 2VPAA 4YBNA 1VL7A 3DNHA 1W3PA 4Z85A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3NFW A;  2ED4 A;  2FG9 A;  5ESC A;  2HTI A;  1YLN A;  3A6R A;  4XJ2 A;  3VY5 A;  3AWH A;  2RE7 A;  4YWN A;  3FGE A;  4HMV A;  2HHZ A;  2ECU A;  4HMW A;  2GJG A;  1USC A;  3EC6 A;  3PFT A;  1WGB A;  3HMZ A;  3TGV A;  3K87 A;  2R0X A;  2D36 A;  2FHQ A;  3U0I A;  3VYA A;  2D5M A;  2R6V A;  3U34 A;  1G76 A;  2ASF A;  2ECR A;  3BPK A;  2AQ6 A;  2E83 A;  1W3O A;  1WLK A;  3VY2 A;  1WLI A;  3ZOD A;  3ZOE A;  3HY8 A;  3B5M A;  3GAS A;  3K88 A;  3R5Z A;  2RDE A;  2QCK A;  3KYF A;  1CI0 A;  2IAB A;  5JAB A;  1RZ1 A;  1Y30 A;  3A6Q A;  2FUR A;  1G79 A;  2NR4 A;  2I02 A;  3CP3 A;  1W3Q A;  3K86 A;  4F07 A;  4IRA A;  1G77 A;  1I0R A;  1NRG A;  3FKH A;  1I0S A;  4R82 A;  1XHN A;  3H96 A;  4Y9I A;  3ZOG A;  4HMS A;  1RZ0 A;  4QVB A;  4HMT A;  3AMF A;  1T9M A;  2X1K A;  3RH7 A;  3E4V A;  4HX6 A;  4ZKY A;  3SWJ A;  3DB0 A;  3DMB A;  3R5L A;  1FLM A;  3F7E A;  3KYG A;  2D38 A;  3BA3 A;  3R5W A;  2A2J A;  4HMX A;  2D37 A;  5CHE C;  2I51 A;  3U5W A;  1USF A;  2Q9K A;  1XXO A;  2IML A;  1AXJ A;  2OL5 A;  3ZOC A;  3CB0 A;  2OU5 A;  3ZOH A;  5BNC A;  1G78 A;  1TY9 A;  4XHY A;  3ZOF A;  2PTF A;  3BNK A;  1W9A A;  3R5P A;  2HTD A;  3A20 A;  1W3R A;  2ARZ A;  4N7R C;  2IG6 A;  1EJE A;  3IN6 A;  5CHO A;  1JNW A;  3R5Y A;  1YOA A;  1DNL A;  4L82 A;  3U35 A;  1WV4 A;  2QEA A;  2X1J A;  2HQ7 A;  2HQ9 A;  3R5R A;  4HMU A;  1RFE A;  2VPA A;  4YBN A;  1VL7 A;  3DNH A;  1W3P A;  4Z85 A; 
#chains in the Genus database with same CATH topology
 3NFW A;  2ED4 A;  4TV4 A;  2FG9 A;  5ESC A;  2HTI A;  1YLN A;  3A6R A;  4XJ2 A;  3VY5 A;  3AWH A;  2RE7 A;  4YWN A;  3FGE A;  4HMV A;  2HHZ A;  2ECU A;  4HMW A;  2GJG A;  1USC A;  3EC6 A;  3PFT A;  1WGB A;  3HMZ A;  3TGV A;  3K87 A;  2K4Q A;  2R0X A;  2D36 A;  2FHQ A;  2L1T A;  3U0I A;  3VYA A;  3V4H A;  2D5M A;  2R6V A;  3U34 A;  1G76 A;  2ASF A;  2ECR A;  3BPK A;  2AQ6 A;  2E83 A;  1W3O A;  1WLK A;  3VY2 A;  1WLI A;  3ZOD A;  3ZOE A;  3HY8 A;  3B5M A;  3GAS A;  3K88 A;  3R5Z A;  2RDE A;  2QCK A;  3KYF A;  1CI0 A;  2IAB A;  4W64 A;  4UHV A;  5JAB A;  1RZ1 A;  1Y30 A;  3A6Q A;  2FUR A;  1G79 A;  2NR4 A;  2I02 A;  3CP3 A;  1W3Q A;  3K86 A;  4F07 A;  4IRA A;  1G77 A;  1I0R A;  1NRG A;  3FKH A;  3HE1 A;  1I0S A;  4R82 A;  1XHN A;  3H96 A;  4Y9I A;  3ZOG A;  4HMS A;  1RZ0 A;  4QVB A;  4HMT A;  3AMF A;  1T9M A;  2X1K A;  3RH7 A;  3E4V A;  4HX6 A;  3EAA A;  4ZKY A;  3SWJ A;  2P5Z X;  3DB0 A;  3DMB A;  3R5L A;  1FLM A;  3F7E A;  3KYG A;  2D38 A;  3BA3 A;  3R5W A;  2A2J A;  4HMX A;  2GUJ A;  2D37 A;  5CHE C;  2I51 A;  3U5W A;  4MTK A;  1USF A;  2Q9K A;  1XXO A;  2IML A;  1AXJ A;  2OL5 A;  3ZOC A;  3CB0 A;  2OU5 A;  3ZOH A;  1Y12 A;  4HKH A;  5BNC A;  1G78 A;  1TY9 A;  4XHY A;  3ZOF A;  2PTF A;  3BNK A;  1W9A A;  3R5P A;  2HTD A;  3A20 A;  1W3R A;  2ARZ A;  4N7R C;  2IG6 A;  1EJE A;  3IN6 A;  5CHO A;  1JNW A;  3R5Y A;  1YOA A;  1DNL A;  4L82 A;  3U35 A;  1WV4 A;  2QEA A;  2X1J A;  2HQ7 A;  2HQ9 A;  3R5R A;  4HMU A;  1RFE A;  2VPA A;  4YBN A;  1VL7 A;  3DNH A;  1W3P A;  4Z85 A; 
#chains in the Genus database with same CATH homology
 3NFW A;  2ED4 A;  2FG9 A;  5ESC A;  2HTI A;  1YLN A;  3A6R A;  4XJ2 A;  3VY5 A;  3AWH A;  2RE7 A;  4YWN A;  3FGE A;  4HMV A;  2HHZ A;  2ECU A;  4HMW A;  2GJG A;  1USC A;  3EC6 A;  3PFT A;  1WGB A;  3HMZ A;  3TGV A;  3K87 A;  2R0X A;  2D36 A;  2FHQ A;  3U0I A;  3VYA A;  2D5M A;  2R6V A;  3U34 A;  1G76 A;  2ASF A;  2ECR A;  3BPK A;  2AQ6 A;  2E83 A;  1W3O A;  1WLK A;  3VY2 A;  1WLI A;  3ZOD A;  3ZOE A;  3HY8 A;  3B5M A;  3GAS A;  3K88 A;  3R5Z A;  2RDE A;  2QCK A;  3KYF A;  1CI0 A;  2IAB A;  5JAB A;  1RZ1 A;  1Y30 A;  3A6Q A;  2FUR A;  1G79 A;  2NR4 A;  2I02 A;  3CP3 A;  1W3Q A;  3K86 A;  4F07 A;  4IRA A;  1G77 A;  1I0R A;  1NRG A;  3FKH A;  1I0S A;  4R82 A;  1XHN A;  3H96 A;  4Y9I A;  3ZOG A;  4HMS A;  1RZ0 A;  4QVB A;  4HMT A;  3AMF A;  1T9M A;  2X1K A;  3RH7 A;  3E4V A;  4HX6 A;  4ZKY A;  3SWJ A;  3DB0 A;  3DMB A;  3R5L A;  1FLM A;  3F7E A;  3KYG A;  2D38 A;  3BA3 A;  3R5W A;  2A2J A;  4HMX A;  2D37 A;  5CHE C;  2I51 A;  3U5W A;  1USF A;  2Q9K A;  1XXO A;  2IML A;  1AXJ A;  2OL5 A;  3ZOC A;  3CB0 A;  2OU5 A;  3ZOH A;  5BNC A;  1G78 A;  1TY9 A;  4XHY A;  3ZOF A;  2PTF A;  3BNK A;  1W9A A;  3R5P A;  2HTD A;  3A20 A;  1W3R A;  2ARZ A;  4N7R C;  2IG6 A;  1EJE A;  3IN6 A;  5CHO A;  1JNW A;  3R5Y A;  1YOA A;  1DNL A;  4L82 A;  3U35 A;  1WV4 A;  2QEA A;  2X1J A;  2HQ7 A;  2HQ9 A;  3R5R A;  4HMU A;  1RFE A;  2VPA A;  4YBN A;  1VL7 A;  3DNH A;  1W3P A;  4Z85 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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