4HREA

Crystal structure of p11/annexin a2 heterotetramer in complex with smarca3 peptide
Total Genus 131
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
131
sequence length
338
structure length
338
Chain Sequence
STVHEILCKLSLEGDHSTPPSAYGSVKPYTNFDAERDALNIETAVKTKGVDEVTIVNILTNRSNVQRQDIAFAYQRRTKKELPSALKSALSGHLETVILGLLKTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIISDTSGDFRKLMVALAKGRRAEDGSVIDYELIDQDARELYDAGVKRKGTDVPKWISIMTERSVCHLQKVFERYKSYSPYDMLESIKKEVKGDLENAFLNLVQCIQNKPLYFADRLYDSMKGKGTRDKVLIRIMVSRSEVDMLKIRSEFKRKYGKSLYYYIQQDTKGDYQKALLYLCGGDD
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Calcium-binding protein
molecule keywords Annexin A2
publication title SMARCA3, a Chromatin-Remodeling Factor, Is Required for p11-Dependent Antidepressant Action.
pubmed doi rcsb
source organism Mus musculus
total genus 131
structure length 338
sequence length 338
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2012-10-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00191 Annexin Annexin
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 4hreA04
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 4hreA01
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 4hreA02
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 4hreA03
1W7BA 2H0LA 1XJLA 2Q4CA 2IE6A 4X9PA 1G5NA 4MDUA 2H0KA 1N44A 1HVDA 1AIIA 1AVRA 2IICA 1DM5A 2HYUA 1BCYA 1A8AA 2II2A 3BRXA 2IE7A 1DK5A 1I4AA 4MDVA 1N42A 4HREA 1BO9A 1BC0A 2HYVA 1YCNA 1AEIA 1A8BA 1BC1A 1W3WA 2ZHIA 1ANNA 1HVGA 1N41A 2ZHJA 2RANA 1BCZA 1W45A 1SAVA 1HVEA 2XO2A 1HVFA 1AVHA 2ZOCA 4EVHA 1AVCA 1ANXA 1YIIA 2H0MA 1M9IA 2HYWA 1AOWA 1HM6A 1ALAA 1HAKA 1ANWA 1BCWA 1MCXA 2XO3A 4EVFA 1BC3A 1AXNA 1N00A 1YJ0A
chains in the Genus database with same CATH superfamily
1W7BA 4JK1X 1N42A 4HREA 1BC0A 2HYVA 2R09A 1XT0B 1AEIA 1ANNA 2RANA 1BCZA 3ABSA 1SAVA 2HSNA 1HVEA 4Q2SA 1RE0B 4EVHA 1ANXA 3SWVA 1QC7A 3ANYA 4EVFA 1ANWA 4C7PA 1AXNA 1N00A 4L5MA 2IE6A 1XSZA 4KN7X 3LTLA 2IICA 1BC9A 1A8AA 4JMIA 1R4AE 3BRXA 2IE7A 3ABOA 4KMUX 1BO9A 2R0DA 1A8BA 1W3WA 1HVGA 1YGMA 1HVFA 4C0AA 4A4PA 1LKVX 3USWA 2OY9A 2HYWA 1AOWA 4D7RA 1ALAA 1BCWA 3AO0A 1YJ0A 2H0LA 2Q4CA 3ABQA 4OIYA 4JWLA 4MDUA 4X9PA 1N44A 1Q8DA 3SOHB 1HVDA 1AIIA 1DM5A 3TW5A 1BCYA 2VXGA 4FQ0C 3AJCA 1DK5A 1I4AA 4MDVA 3ABRA 1BC1A 1W45A 1AVHA 3USYA 1AVCA 1R8SE 2H0MA 1M9IA 1HAKA 1MCXA 1R8ME 1PBVA 1XJLA 2K6XA 1G5NA 2H0KA 1KU1A 4D7QA 1AVRA 2QEZA 2HYUA 2II2A 1S9DE 4KN4X 4JXHA 1YCNA 2ZHIA 1UPTB 4Z21A 1N41A 2ZHJA 3L8NA 2XO2A 2ZOCA 1C1KA 1YIIA 1R8QE 3HJLA 1HM6A 4JMOA 2XO3A 1BC3A 4FHRB
chains in the Genus database with same CATH topology
1W7BA 2H0LA 1XJLA 2Q4CA 2IE6A 4X9PA 1G5NA 4MDUA 2H0KA 1N44A 1HVDA 1AIIA 1AVRA 2IICA 1DM5A 2HYUA 1BCYA 1A8AA 2II2A 3BRXA 2IE7A 1DK5A 1I4AA 4MDVA 1N42A 4HREA 1BO9A 1BC0A 2HYVA 1YCNA 1AEIA 1A8BA 1BC1A 1W3WA 2ZHIA 1ANNA 1HVGA 1N41A 2ZHJA 2RANA 1BCZA 1W45A 1SAVA 1HVEA 2XO2A 1HVFA 1AVHA 2ZOCA 4EVHA 1AVCA 1ANXA 1YIIA 2H0MA 1M9IA 2HYWA 1AOWA 1HM6A 1ALAA 1HAKA 1ANWA 1BCWA 1MCXA 2XO3A 4EVFA 1BC3A 1AXNA 1N00A 1YJ0A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1W7B A;  2H0L A;  1XJL A;  2Q4C A;  2IE6 A;  4X9P A;  1G5N A;  4MDU A;  2H0K A;  1N44 A;  1HVD A;  1AII A;  1AVR A;  2IIC A;  1DM5 A;  2HYU A;  1BCY A;  1A8A A;  2II2 A;  3BRX A;  2IE7 A;  1DK5 A;  1I4A A;  4MDV A;  1N42 A;  4HRE A;  1BO9 A;  1BC0 A;  2HYV A;  1YCN A;  1AEI A;  1A8B A;  1BC1 A;  1W3W A;  2ZHI A;  1ANN A;  1HVG A;  1N41 A;  2ZHJ A;  2RAN A;  1BCZ A;  1W45 A;  1SAV A;  1HVE A;  2XO2 A;  1HVF A;  1AVH A;  2ZOC A;  4EVH A;  1AVC A;  1ANX A;  1YII A;  2H0M A;  1M9I A;  2HYW A;  1AOW A;  1HM6 A;  1ALA A;  1HAK A;  1ANW A;  1BCW A;  1MCX A;  2XO3 A;  4EVF A;  1BC3 A;  1AXN A;  1N00 A;  1YJ0 A; 
#chains in the Genus database with same CATH topology
 1W7B A;  4JK1 X;  1N42 A;  4HRE A;  1BC0 A;  2HYV A;  2R09 A;  1XT0 B;  1AEI A;  1ANN A;  2RAN A;  1BCZ A;  3ABS A;  1SAV A;  2HSN A;  1HVE A;  4Q2S A;  1RE0 B;  4EVH A;  1ANX A;  3SWV A;  1QC7 A;  3ANY A;  4EVF A;  1ANW A;  4C7P A;  1AXN A;  1N00 A;  4L5M A;  2IE6 A;  1XSZ A;  4KN7 X;  3LTL A;  2IIC A;  1BC9 A;  1A8A A;  4JMI A;  1R4A E;  3BRX A;  2IE7 A;  3ABO A;  4KMU X;  1BO9 A;  2R0D A;  1A8B A;  1W3W A;  1HVG A;  1YGM A;  1HVF A;  4C0A A;  4A4P A;  1LKV X;  3USW A;  2OY9 A;  2HYW A;  1AOW A;  4D7R A;  1ALA A;  1BCW A;  3AO0 A;  1YJ0 A;  2H0L A;  2Q4C A;  3ABQ A;  4OIY A;  4JWL A;  4MDU A;  4X9P A;  1N44 A;  1Q8D A;  3SOH B;  1HVD A;  1AII A;  1DM5 A;  3TW5 A;  1BCY A;  2VXG A;  4FQ0 C;  3AJC A;  1DK5 A;  1I4A A;  4MDV A;  3ABR A;  1BC1 A;  1W45 A;  1AVH A;  3USY A;  1AVC A;  1R8S E;  2H0M A;  1M9I A;  1HAK A;  1MCX A;  1R8M E;  1PBV A;  1XJL A;  2K6X A;  1G5N A;  2H0K A;  1KU1 A;  4D7Q A;  1AVR A;  2QEZ A;  2HYU A;  2II2 A;  1S9D E;  4KN4 X;  4JXH A;  1YCN A;  2ZHI A;  1UPT B;  4Z21 A;  1N41 A;  2ZHJ A;  3L8N A;  2XO2 A;  2ZOC A;  1C1K A;  1YII A;  1R8Q E;  3HJL A;  1HM6 A;  4JMO A;  2XO3 A;  1BC3 A;  4FHR B; 
#chains in the Genus database with same CATH homology
 1W7B A;  2H0L A;  1XJL A;  2Q4C A;  2IE6 A;  4X9P A;  1G5N A;  4MDU A;  2H0K A;  1N44 A;  1HVD A;  1AII A;  1AVR A;  2IIC A;  1DM5 A;  2HYU A;  1BCY A;  1A8A A;  2II2 A;  3BRX A;  2IE7 A;  1DK5 A;  1I4A A;  4MDV A;  1N42 A;  4HRE A;  1BO9 A;  1BC0 A;  2HYV A;  1YCN A;  1AEI A;  1A8B A;  1BC1 A;  1W3W A;  2ZHI A;  1ANN A;  1HVG A;  1N41 A;  2ZHJ A;  2RAN A;  1BCZ A;  1W45 A;  1SAV A;  1HVE A;  2XO2 A;  1HVF A;  1AVH A;  2ZOC A;  4EVH A;  1AVC A;  1ANX A;  1YII A;  2H0M A;  1M9I A;  2HYW A;  1AOW A;  1HM6 A;  1ALA A;  1HAK A;  1ANW A;  1BCW A;  1MCX A;  2XO3 A;  4EVF A;  1BC3 A;  1AXN A;  1N00 A;  1YJ0 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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