4I5NC

Structural mechanism of trimeric pp2a holoenzyme involving pr70: insight for cdc6 dephosphorylation
Total Genus 104
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
104
sequence length
293
structure length
293
Chain Sequence
DEKVFTKELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase/toxin
source organism Homo sapiens
publication title Structure of the Ca(2+)-dependent PP2A heterotrimer and insights into Cdc6 dephosphorylation.
pubmed doi rcsb
molecule keywords Serine/threonine-protein phosphatase 2A 65 kDa regulatory su
total genus 104
structure length 293
sequence length 293
chains with identical sequence F
ec nomenclature ec 3.1.3.16: Protein-serine/threonine phosphatase.
pdb deposition date 2012-11-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF00149 Metallophos Calcineurin-like phosphoesterase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 4i5nC00
2Z06A 3K7WC 4H2GA 4ORAA 2Q8UA 2O8GA 5JPFA 5JPEA 2R17A 3H64A 4MOYA 5C1VA 3GVEA 2BDXA 4V0VA 1Z2XA 1NNWA 2WDEA 3ICFA 2HY1A 4LU9A 1G5BA 4B2OA 1UF3A 3RL5A 1IT6A 1XZWA 4H2BA 4ZX2A 3H63A 4V0WA 4O4KA 3AUZA 1S95A 3DSCA 3THNA 2Z1AA 1UTEA 1S8EA 1S3LA 4UT2A 3T1IA 3ZTVA 2O8AA 2QJCA 3C5WC 3E7AA 3H66A 3C9FA 4IYPC 3IVDA 4JA7A 5GTUA 1FJMA 2USHA 2ZBMA 4H1SA 2AHDA 1OIDA 4I5NC 3QFMA 4MOVA 4MP0A 4DT2A 5F3WA 1JK7A 3FGAC 4JA9A 1V73A 2WDDA 3IVEA 3QG5C 4O24A 1KBPA 3KBPA 3QFNA 4FBWA 2CV9A 2WDFA 1WARA 1USHA 3DSDA 2A22A 2IAEC 1T71A 3N5UA 4J6OA 1M63A 5INBA 4G9JA 3ZU0A 4HD0A 1II7A 4F0ZA 4FCXA 4V0XA 3EGGA 2NYLC 2BCDA 4ORCA 2IE4C 4O5GA 1QFCA 3H68A 4WWLA 1T70A 3TGHA 5DNYA 2IE3C 4H1YP 1S70A 3RQZA 4DHLA 2YVTA 3H61A 3JYFA 4Q7FA 4XPNA 4TUIA 4DSYA 1S3MA 1TCOA 3RL3A 4IL1A 3H67A 3EGHA 1MF8A 4UT3A 3THOB 1WAO1 5EQVA 1Z2WA 3RL4A 5B8IA 5JJTA 1HO5A 4NZVA 4TUGA 1HP1A 5IOHA 4UWQA 1OIEA 1S3NA 4H2IA 4O43A 4FBQA 2BQ8X 2XMOA 3PSOA 2NPPC 3H60A 3H62B 4KKZA 1AUIA 1HPUA 1U32A 2JOGA 3H69A 1W24A 2WDCA 5HPEA 4KBPA 3CK2A 4I5LC 2P6BA 3V4YA 4M0VA 3DW8C 2QFPA 1OI8A 1QHWA 2NXFA 1XM7A 4OR9A 3QFKA 2Z72A 4YKEA 3HVQA 4LTYA 2QFRA 4FBKA 4ORBA 2GJUA 2HYPA 3AV0A 3E7BA 2HYOA 3IB8A 2NYMC 3LL8A 3P71C 4ZVZA 2DFJA 2KKNA 4UT3B 3IB7A 3K7VC 3PSNA 4LACC 1SU1A 5J28A 4H2FA 3QFOA
chains in the Genus database with same CATH superfamily
2Z06A 3K7WC 4H2GA 4ORAA 2Q8UA 2O8GA 2YEQA 5JPFA 5JPEA 2R17A 3FLOA 3H64A 4MOYA 5C1VA 3GVEA 2BDXA 4V0VA 1Z2XA 1NNWA 2WDEA 3ICFA 2HY1A 4LU9A 1G5BA 4B2OA 1UF3A 3RL5A 1IT6A 1XZWA 4H2BA 4ZX2A 3H63A 4V0WA 4O4KA 3AUZA 1S95A 3DSCA 3THNA 2Z1AA 1UTEA 1S8EA 1S3LA 4UT2A 3T1IA 3ZTVA 2O8AA 2QJCA 3C5WC 3E7AA 3H66A 3C9FA 4IYPC 3IVDA 4JA7A 5GTUA 1FJMA 2ZOAA 2USHA 2ZBMA 4H1SA 2AHDA 1OIDA 4I5NC 2DXNA 3QFMA 4MOVA 4MP0A 4DT2A 5F3WA 1JK7A 3FGAC 4JA9A 1V73A 2WDDA 3IVEA 3QG5C 4O24A 1KBPA 3KBPA 3QFNA 4FBWA 2CV9A 2WDFA 1WARA 1USHA 3DSDA 2A22A 2IAEC 1T71A 3N5UA 4J6OA 1M63A 5INBA 4G9JA 3ZU0A 4HD0A 1II7A 4F0ZA 4FCXA 4V0XA 3EGGA 2NYLC 2BCDA 4ORCA 2IE4C 4O5GA 1QFCA 3H68A 4WWLA 1T70A 3TGHA 5DNYA 2IE3C 4H1YP 1S70A 3RQZA 4DHLA 2YVTA 3H61A 3JYFA 4Q7FA 4XPNA 4TUIA 4DSYA 1S3MA 1TCOA 3RL3A 4IL1A 3H67A 3EGHA 1MF8A 3D03A 4UT3A 3THOB 1WAO1 5EQVA 1Z2WA 3RL4A 5B8IA 3E0JA 1HO5A 4NZVA 5JJTA 4TUGA 1HP1A 5IOHA 4UWQA 1OIEA 1S3NA 4H2IA 4O43A 4FBQA 2BQ8X 2DXLA 2XMOA 3PSOA 2NPPC 3H60A 3H62B 4KKZA 1AUIA 1HPUA 1U32A 2JOGA 3H69A 1W24A 2WDCA 5HPEA 4KBPA 3CK2A 4I5LC 2P6BA 3V4YA 4M0VA 3DW8C 2QFPA 1OI8A 1QHWA 2NXFA 1XM7A 4OR9A 3QFKA 2Z72A 4YKEA 3HVQA 4LTYA 2QFRA 4FBKA 4ORBA 2ZO9B 2GJUA 2HYPA 3AV0A 3E7BA 2HYOA 3IB8A 2NYMC 3LL8A 3P71C 4ZVZA 2DFJA 2KKNA 4UT3B 3IB7A 3K7VC 3PSNA 4LACC 1SU1A 5J28A 4H2FA 3QFOA
chains in the Genus database with same CATH topology
2Z06A 3K7WC 4H2GA 4ORAA 2Q8UA 2O8GA 2YEQA 5JPFA 5JPEA 2R17A 3FLOA 3H64A 4MOYA 5C1VA 3GVEA 2BDXA 4V0VA 1Z2XA 1NNWA 2WDEA 3ICFA 2HY1A 4LU9A 1G5BA 4B2OA 1UF3A 3RL5A 1IT6A 1XZWA 4H2BA 4ZX2A 3H63A 4V0WA 4O4KA 3AUZA 1S95A 3DSCA 3THNA 2Z1AA 1UTEA 1S8EA 1S3LA 4UT2A 3T1IA 3ZTVA 2O8AA 2QJCA 3C5WC 3E7AA 3H66A 3C9FA 4IYPC 3IVDA 4JA7A 5GTUA 1FJMA 2ZOAA 2USHA 2ZBMA 4H1SA 2AHDA 1OIDA 4I5NC 2DXNA 3QFMA 4MOVA 4MP0A 4DT2A 5F3WA 1JK7A 3FGAC 4JA9A 1V73A 2WDDA 3IVEA 3QG5C 4O24A 1KBPA 3KBPA 3QFNA 4FBWA 2CV9A 2WDFA 1WARA 1USHA 3DSDA 2A22A 2IAEC 1T71A 3N5UA 4J6OA 1M63A 5INBA 4G9JA 3ZU0A 4HD0A 1II7A 4F0ZA 4FCXA 4V0XA 3EGGA 2NYLC 2BCDA 4ORCA 2IE4C 4O5GA 1QFCA 3H68A 4WWLA 1T70A 3TGHA 5DNYA 2IE3C 4H1YP 1S70A 3RQZA 4DHLA 2YVTA 3H61A 3JYFA 4Q7FA 4XPNA 4TUIA 4DSYA 1S3MA 1TCOA 3RL3A 4IL1A 3H67A 3EGHA 1MF8A 3D03A 4UT3A 3THOB 1WAO1 5EQVA 1Z2WA 3RL4A 5B8IA 3E0JA 1HO5A 4NZVA 5JJTA 4TUGA 1HP1A 5IOHA 4UWQA 1OIEA 1S3NA 4H2IA 4O43A 4FBQA 2BQ8X 2DXLA 2XMOA 3PSOA 2NPPC 3H60A 3H62B 4KKZA 1AUIA 1HPUA 1U32A 2JOGA 3H69A 1W24A 2WDCA 5HPEA 4KBPA 3CK2A 4I5LC 2P6BA 3V4YA 4M0VA 3DW8C 2QFPA 1OI8A 1QHWA 2NXFA 1XM7A 4OR9A 3QFKA 2Z72A 4YKEA 3HVQA 4LTYA 2QFRA 4FBKA 4ORBA 2ZO9B 2GJUA 2HYPA 3AV0A 3E7BA 2HYOA 3IB8A 2NYMC 3LL8A 3P71C 4ZVZA 2DFJA 2KKNA 4UT3B 3IB7A 3K7VC 3PSNA 4LACC 1SU1A 5J28A 4H2FA 3QFOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2Z06 A;  3K7W C;  4H2G A;  4ORA A;  2Q8U A;  2O8G A;  5JPF A;  5JPE A;  2R17 A;  3H64 A;  4MOY A;  5C1V A;  3GVE A;  2BDX A;  4V0V A;  1Z2X A;  1NNW A;  2WDE A;  3ICF A;  2HY1 A;  4LU9 A;  1G5B A;  4B2O A;  1UF3 A;  3RL5 A;  1IT6 A;  1XZW A;  4H2B A;  4ZX2 A;  3H63 A;  4V0W A;  4O4K A;  3AUZ A;  1S95 A;  3DSC A;  3THN A;  2Z1A A;  1UTE A;  1S8E A;  1S3L A;  4UT2 A;  3T1I A;  3ZTV A;  2O8A A;  2QJC A;  3C5W C;  3E7A A;  3H66 A;  3C9F A;  4IYP C;  3IVD A;  4JA7 A;  5GTU A;  1FJM A;  2USH A;  2ZBM A;  4H1S A;  2AHD A;  1OID A;  4I5N C;  3QFM A;  4MOV A;  4MP0 A;  4DT2 A;  5F3W A;  1JK7 A;  3FGA C;  4JA9 A;  1V73 A;  2WDD A;  3IVE A;  3QG5 C;  4O24 A;  1KBP A;  3KBP A;  3QFN A;  4FBW A;  2CV9 A;  2WDF A;  1WAR A;  1USH A;  3DSD A;  2A22 A;  2IAE C;  1T71 A;  3N5U A;  4J6O A;  1M63 A;  5INB A;  4G9J A;  3ZU0 A;  4HD0 A;  1II7 A;  4F0Z A;  4FCX A;  4V0X A;  3EGG A;  2NYL C;  2BCD A;  4ORC A;  2IE4 C;  4O5G A;  1QFC A;  3H68 A;  4WWL A;  1T70 A;  3TGH A;  5DNY A;  2IE3 C;  4H1Y P;  1S70 A;  3RQZ A;  4DHL A;  2YVT A;  3H61 A;  3JYF A;  4Q7F A;  4XPN A;  4TUI A;  4DSY A;  1S3M A;  1TCO A;  3RL3 A;  4IL1 A;  3H67 A;  3EGH A;  1MF8 A;  4UT3 A;  3THO B;  1WAO 1;  5EQV A;  1Z2W A;  3RL4 A;  5B8I A;  5JJT A;  1HO5 A;  4NZV A;  4TUG A;  1HP1 A;  5IOH A;  4UWQ A;  1OIE A;  1S3N A;  4H2I A;  4O43 A;  4FBQ A;  2BQ8 X;  2XMO A;  3PSO A;  2NPP C;  3H60 A;  3H62 B;  4KKZ A;  1AUI A;  1HPU A;  1U32 A;  2JOG A;  3H69 A;  1W24 A;  2WDC A;  5HPE A;  4KBP A;  3CK2 A;  4I5L C;  2P6B A;  3V4Y A;  4M0V A;  3DW8 C;  2QFP A;  1OI8 A;  1QHW A;  2NXF A;  1XM7 A;  4OR9 A;  3QFK A;  2Z72 A;  4YKE A;  3HVQ A;  4LTY A;  2QFR A;  4FBK A;  4ORB A;  2GJU A;  2HYP A;  3AV0 A;  3E7B A;  2HYO A;  3IB8 A;  2NYM C;  3LL8 A;  3P71 C;  4ZVZ A;  2DFJ A;  2KKN A;  4UT3 B;  3IB7 A;  3K7V C;  3PSN A;  4LAC C;  1SU1 A;  5J28 A;  4H2F A;  3QFO A; 
#chains in the Genus database with same CATH topology
 2Z06 A;  3K7W C;  4H2G A;  4ORA A;  2Q8U A;  2O8G A;  2YEQ A;  5JPF A;  5JPE A;  2R17 A;  3FLO A;  3H64 A;  4MOY A;  5C1V A;  3GVE A;  2BDX A;  4V0V A;  1Z2X A;  1NNW A;  2WDE A;  3ICF A;  2HY1 A;  4LU9 A;  1G5B A;  4B2O A;  1UF3 A;  3RL5 A;  1IT6 A;  1XZW A;  4H2B A;  4ZX2 A;  3H63 A;  4V0W A;  4O4K A;  3AUZ A;  1S95 A;  3DSC A;  3THN A;  2Z1A A;  1UTE A;  1S8E A;  1S3L A;  4UT2 A;  3T1I A;  3ZTV A;  2O8A A;  2QJC A;  3C5W C;  3E7A A;  3H66 A;  3C9F A;  4IYP C;  3IVD A;  4JA7 A;  5GTU A;  1FJM A;  2ZOA A;  2USH A;  2ZBM A;  4H1S A;  2AHD A;  1OID A;  4I5N C;  2DXN A;  3QFM A;  4MOV A;  4MP0 A;  4DT2 A;  5F3W A;  1JK7 A;  3FGA C;  4JA9 A;  1V73 A;  2WDD A;  3IVE A;  3QG5 C;  4O24 A;  1KBP A;  3KBP A;  3QFN A;  4FBW A;  2CV9 A;  2WDF A;  1WAR A;  1USH A;  3DSD A;  2A22 A;  2IAE C;  1T71 A;  3N5U A;  4J6O A;  1M63 A;  5INB A;  4G9J A;  3ZU0 A;  4HD0 A;  1II7 A;  4F0Z A;  4FCX A;  4V0X A;  3EGG A;  2NYL C;  2BCD A;  4ORC A;  2IE4 C;  4O5G A;  1QFC A;  3H68 A;  4WWL A;  1T70 A;  3TGH A;  5DNY A;  2IE3 C;  4H1Y P;  1S70 A;  3RQZ A;  4DHL A;  2YVT A;  3H61 A;  3JYF A;  4Q7F A;  4XPN A;  4TUI A;  4DSY A;  1S3M A;  1TCO A;  3RL3 A;  4IL1 A;  3H67 A;  3EGH A;  1MF8 A;  3D03 A;  4UT3 A;  3THO B;  1WAO 1;  5EQV A;  1Z2W A;  3RL4 A;  5B8I A;  3E0J A;  1HO5 A;  4NZV A;  5JJT A;  4TUG A;  1HP1 A;  5IOH A;  4UWQ A;  1OIE A;  1S3N A;  4H2I A;  4O43 A;  4FBQ A;  2BQ8 X;  2DXL A;  2XMO A;  3PSO A;  2NPP C;  3H60 A;  3H62 B;  4KKZ A;  1AUI A;  1HPU A;  1U32 A;  2JOG A;  3H69 A;  1W24 A;  2WDC A;  5HPE A;  4KBP A;  3CK2 A;  4I5L C;  2P6B A;  3V4Y A;  4M0V A;  3DW8 C;  2QFP A;  1OI8 A;  1QHW A;  2NXF A;  1XM7 A;  4OR9 A;  3QFK A;  2Z72 A;  4YKE A;  3HVQ A;  4LTY A;  2QFR A;  4FBK A;  4ORB A;  2ZO9 B;  2GJU A;  2HYP A;  3AV0 A;  3E7B A;  2HYO A;  3IB8 A;  2NYM C;  3LL8 A;  3P71 C;  4ZVZ A;  2DFJ A;  2KKN A;  4UT3 B;  3IB7 A;  3K7V C;  3PSN A;  4LAC C;  1SU1 A;  5J28 A;  4H2F A;  3QFO A; 
#chains in the Genus database with same CATH homology
 2Z06 A;  3K7W C;  4H2G A;  4ORA A;  2Q8U A;  2O8G A;  2YEQ A;  5JPF A;  5JPE A;  2R17 A;  3FLO A;  3H64 A;  4MOY A;  5C1V A;  3GVE A;  2BDX A;  4V0V A;  1Z2X A;  1NNW A;  2WDE A;  3ICF A;  2HY1 A;  4LU9 A;  1G5B A;  4B2O A;  1UF3 A;  3RL5 A;  1IT6 A;  1XZW A;  4H2B A;  4ZX2 A;  3H63 A;  4V0W A;  4O4K A;  3AUZ A;  1S95 A;  3DSC A;  3THN A;  2Z1A A;  1UTE A;  1S8E A;  1S3L A;  4UT2 A;  3T1I A;  3ZTV A;  2O8A A;  2QJC A;  3C5W C;  3E7A A;  3H66 A;  3C9F A;  4IYP C;  3IVD A;  4JA7 A;  5GTU A;  1FJM A;  2ZOA A;  2USH A;  2ZBM A;  4H1S A;  2AHD A;  1OID A;  4I5N C;  2DXN A;  3QFM A;  4MOV A;  4MP0 A;  4DT2 A;  5F3W A;  1JK7 A;  3FGA C;  4JA9 A;  1V73 A;  2WDD A;  3IVE A;  3QG5 C;  4O24 A;  1KBP A;  3KBP A;  3QFN A;  4FBW A;  2CV9 A;  2WDF A;  1WAR A;  1USH A;  3DSD A;  2A22 A;  2IAE C;  1T71 A;  3N5U A;  4J6O A;  1M63 A;  5INB A;  4G9J A;  3ZU0 A;  4HD0 A;  1II7 A;  4F0Z A;  4FCX A;  4V0X A;  3EGG A;  2NYL C;  2BCD A;  4ORC A;  2IE4 C;  4O5G A;  1QFC A;  3H68 A;  4WWL A;  1T70 A;  3TGH A;  5DNY A;  2IE3 C;  4H1Y P;  1S70 A;  3RQZ A;  4DHL A;  2YVT A;  3H61 A;  3JYF A;  4Q7F A;  4XPN A;  4TUI A;  4DSY A;  1S3M A;  1TCO A;  3RL3 A;  4IL1 A;  3H67 A;  3EGH A;  1MF8 A;  3D03 A;  4UT3 A;  3THO B;  1WAO 1;  5EQV A;  1Z2W A;  3RL4 A;  5B8I A;  3E0J A;  1HO5 A;  4NZV A;  5JJT A;  4TUG A;  1HP1 A;  5IOH A;  4UWQ A;  1OIE A;  1S3N A;  4H2I A;  4O43 A;  4FBQ A;  2BQ8 X;  2DXL A;  2XMO A;  3PSO A;  2NPP C;  3H60 A;  3H62 B;  4KKZ A;  1AUI A;  1HPU A;  1U32 A;  2JOG A;  3H69 A;  1W24 A;  2WDC A;  5HPE A;  4KBP A;  3CK2 A;  4I5L C;  2P6B A;  3V4Y A;  4M0V A;  3DW8 C;  2QFP A;  1OI8 A;  1QHW A;  2NXF A;  1XM7 A;  4OR9 A;  3QFK A;  2Z72 A;  4YKE A;  3HVQ A;  4LTY A;  2QFR A;  4FBK A;  4ORB A;  2ZO9 B;  2GJU A;  2HYP A;  3AV0 A;  3E7B A;  2HYO A;  3IB8 A;  2NYM C;  3LL8 A;  3P71 C;  4ZVZ A;  2DFJ A;  2KKN A;  4UT3 B;  3IB7 A;  3K7V C;  3PSN A;  4LAC C;  1SU1 A;  5J28 A;  4H2F A;  3QFO A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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