4IRAA

Cobr in complex with fad
Total Genus 34
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
34
sequence length
162
structure length
162
Chain Sequence
STVESKAYRDAMSHYAGAVQIVTTAGAAGRRGLTLTAACSVSDNPPTILICLQKIHEENRIFIENGVFAINTLAGPHQQLADAFSGRIGLTQDERFELAAWEILATGAPVLKGALAAFDCRVVSVQDHSTHHVLFGEVVGLSSHAEEEALIYLNRRYHKLEL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase
molecule keywords 4-hydroxyphenylacetate 3-monooxygenase
publication title Biophysical characterisation and structure-function analysis of Brucella melitensis CobR: Protein-flavin interactions determine function and stability
rcsb
source organism Brucella melitensis bv. 1
total genus 34
structure length 162
sequence length 162
ec nomenclature ec 1.14.13.3: Transferred entry: 1.14.14.9.
pdb deposition date 2013-01-14

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01613 Flavin_Reduct Flavin reductase like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.110.10 Mainly Beta Roll Pnp Oxidase; Chain A Electron Transport, Fmn-binding Protein; Chain A 4iraA00
2E83A 1DNLA 3R5WA 4HMTA 3ZOCA 4QVBA 2HQ9A 1RZ1A 1XHNA 2OL5A 3BPKA 2R6VA 3R5ZA 3ZOFA 3B5MA 4R82A 4F07A 2ECRA 3KYGA 4HMXA 4HMWA 4XJ2A 3K86A 2PTFA 3FKHA 3A6RA 1CI0A 1USFA 2ED4A 2RDEA 3PFTA 4HMVA 4XHYA 3A6QA 3DB0A 3HY8A 2FURA 3AMFA 3HMZA 2A2JA 1RZ0A 1G79A 2HQ7A 3K88A 5JABA 2IG6A 1VL7A 3R5YA 2NR4A 3K87A 4YWNA 1YOAA 1USCA 3RH7A 3EC6A 3DNHA 4N7RC 3H96A 3VY2A 1I0RA 1WLIA 1I0SA 3A20A 3VY5A 1JNWA 5ESCA 1G76A 2Q9KA 2D5MA 2ASFA 2D38A 3CP3A 3GASA 3IN6A 5CHEC 3NFWA 2R0XA 2FG9A 3DMBA 1G77A 3BNKA 2D37A 4HMSA 2ARZA 3AWHA 2IMLA 3KYFA 2VPAA 3U0IA 2HTIA 1RFEA 1G78A 3U35A 1XXOA 4Y9IA 3FGEA 1EJEA 4IRAA 4YBNA 4ZKYA 3ZOHA 3SWJA 1Y30A 2D36A 3F7EA 2X1JA 1T9MA 1W3QA 2OU5A 5CHOA 2QEAA 1WLKA 1NRGA 1W3RA 3R5RA 3E4VA 4HX6A 3TGVA 3ZODA 2I51A 2GJGA 3ZOEA 1FLMA 4HMUA 4L82A 2ECUA 3R5LA 2HHZA 1W3OA 3VYAA 3ZOGA 2FHQA 3R5PA 1TY9A 1AXJA 3BA3A 5BNCA 1YLNA 1W9AA 1W3PA 2AQ6A 3U5WA 2RE7A 2X1KA 1WV4A 4Z85A 3U34A 2HTDA 1WGBA 3CB0A 2IABA 2QCKA 2I02A
chains in the Genus database with same CATH superfamily
2E83A 1DNLA 3R5WA 4HMTA 3ZOCA 4QVBA 2HQ9A 1RZ1A 1XHNA 2OL5A 3BPKA 2R6VA 3R5ZA 3ZOFA 3B5MA 4R82A 4F07A 2ECRA 3KYGA 4HMXA 4HMWA 4XJ2A 3K86A 2PTFA 2P5ZX 3FKHA 3A6RA 1CI0A 1USFA 2ED4A 2RDEA 3PFTA 4HMVA 4XHYA 3A6QA 3DB0A 3HY8A 2FURA 3AMFA 3HMZA 2A2JA 1RZ0A 1G79A 2HQ7A 3K88A 5JABA 2IG6A 3EAAA 1VL7A 3R5YA 2NR4A 3K87A 4YWNA 4UHVA 1YOAA 1USCA 3RH7A 3EC6A 3DNHA 4N7RC 3H96A 3VY2A 1I0RA 1WLIA 1I0SA 3A20A 3VY5A 1JNWA 5ESCA 1G76A 2Q9KA 2D5MA 2ASFA 2D38A 3CP3A 3GASA 3IN6A 5CHEC 3NFWA 2R0XA 2FG9A 1Y12A 3DMBA 1G77A 2GUJA 2D37A 3BNKA 2ARZA 3AWHA 2IMLA 4HMSA 3V4HA 3KYFA 2VPAA 3U0IA 2HTIA 2L1TA 1RFEA 1G78A 3U35A 1XXOA 4Y9IA 3FGEA 1EJEA 4W64A 4MTKA 4IRAA 4YBNA 4ZKYA 3ZOHA 3SWJA 1Y30A 2D36A 3F7EA 1T9MA 2X1JA 1W3QA 2OU5A 2K4QA 5CHOA 2QEAA 4TV4A 1WLKA 1NRGA 1W3RA 3R5RA 3E4VA 4HX6A 3TGVA 3ZODA 2I51A 2GJGA 3ZOEA 1FLMA 4HMUA 4L82A 2ECUA 3R5LA 3HE1A 2HHZA 1W3OA 3VYAA 3ZOGA 2FHQA 3R5PA 1TY9A 1AXJA 3BA3A 5BNCA 1YLNA 1W9AA 1W3PA 2AQ6A 3U5WA 2RE7A 4HKHA 2X1KA 1WV4A 4Z85A 3U34A 2HTDA 1WGBA 3CB0A 2IABA 2QCKA 2I02A
chains in the Genus database with same CATH topology
2E83A 1DNLA 3R5WA 4HMTA 3ZOCA 4QVBA 2HQ9A 1RZ1A 1XHNA 2OL5A 3BPKA 2R6VA 3R5ZA 3ZOFA 3B5MA 4R82A 4F07A 2ECRA 3KYGA 4HMXA 4HMWA 4XJ2A 3K86A 2PTFA 3FKHA 3A6RA 1CI0A 1USFA 2ED4A 2RDEA 3PFTA 4HMVA 4XHYA 3A6QA 3DB0A 3HY8A 2FURA 3AMFA 3HMZA 2A2JA 1RZ0A 1G79A 2HQ7A 3K88A 5JABA 2IG6A 1VL7A 3R5YA 2NR4A 3K87A 4YWNA 1YOAA 1USCA 3RH7A 3EC6A 3DNHA 4N7RC 3H96A 3VY2A 1I0RA 1WLIA 1I0SA 3A20A 3VY5A 1JNWA 5ESCA 1G76A 2Q9KA 2D5MA 2ASFA 2D38A 3CP3A 3GASA 3IN6A 5CHEC 3NFWA 2R0XA 2FG9A 3DMBA 1G77A 3BNKA 2D37A 4HMSA 2ARZA 3AWHA 2IMLA 3KYFA 2VPAA 3U0IA 2HTIA 1RFEA 1G78A 3U35A 1XXOA 4Y9IA 3FGEA 1EJEA 4IRAA 4YBNA 4ZKYA 3ZOHA 3SWJA 1Y30A 2D36A 3F7EA 2X1JA 1T9MA 1W3QA 2OU5A 5CHOA 2QEAA 1WLKA 1NRGA 1W3RA 3R5RA 3E4VA 4HX6A 3TGVA 3ZODA 2I51A 2GJGA 3ZOEA 1FLMA 4HMUA 4L82A 2ECUA 3R5LA 2HHZA 1W3OA 3VYAA 3ZOGA 2FHQA 3R5PA 1TY9A 1AXJA 3BA3A 5BNCA 1YLNA 1W9AA 1W3PA 2AQ6A 3U5WA 2RE7A 2X1KA 1WV4A 4Z85A 3U34A 2HTDA 1WGBA 3CB0A 2IABA 2QCKA 2I02A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2E83 A;  1DNL A;  3R5W A;  4HMT A;  3ZOC A;  4QVB A;  2HQ9 A;  1RZ1 A;  1XHN A;  2OL5 A;  3BPK A;  2R6V A;  3R5Z A;  3ZOF A;  3B5M A;  4R82 A;  4F07 A;  2ECR A;  3KYG A;  4HMX A;  4HMW A;  4XJ2 A;  3K86 A;  2PTF A;  3FKH A;  3A6R A;  1CI0 A;  1USF A;  2ED4 A;  2RDE A;  3PFT A;  4HMV A;  4XHY A;  3A6Q A;  3DB0 A;  3HY8 A;  2FUR A;  3AMF A;  3HMZ A;  2A2J A;  1RZ0 A;  1G79 A;  2HQ7 A;  3K88 A;  5JAB A;  2IG6 A;  1VL7 A;  3R5Y A;  2NR4 A;  3K87 A;  4YWN A;  1YOA A;  1USC A;  3RH7 A;  3EC6 A;  3DNH A;  4N7R C;  3H96 A;  3VY2 A;  1I0R A;  1WLI A;  1I0S A;  3A20 A;  3VY5 A;  1JNW A;  5ESC A;  1G76 A;  2Q9K A;  2D5M A;  2ASF A;  2D38 A;  3CP3 A;  3GAS A;  3IN6 A;  5CHE C;  3NFW A;  2R0X A;  2FG9 A;  3DMB A;  1G77 A;  3BNK A;  2D37 A;  4HMS A;  2ARZ A;  3AWH A;  2IML A;  3KYF A;  2VPA A;  3U0I A;  2HTI A;  1RFE A;  1G78 A;  3U35 A;  1XXO A;  4Y9I A;  3FGE A;  1EJE A;  4IRA A;  4YBN A;  4ZKY A;  3ZOH A;  3SWJ A;  1Y30 A;  2D36 A;  3F7E A;  2X1J A;  1T9M A;  1W3Q A;  2OU5 A;  5CHO A;  2QEA A;  1WLK A;  1NRG A;  1W3R A;  3R5R A;  3E4V A;  4HX6 A;  3TGV A;  3ZOD A;  2I51 A;  2GJG A;  3ZOE A;  1FLM A;  4HMU A;  4L82 A;  2ECU A;  3R5L A;  2HHZ A;  1W3O A;  3VYA A;  3ZOG A;  2FHQ A;  3R5P A;  1TY9 A;  1AXJ A;  3BA3 A;  5BNC A;  1YLN A;  1W9A A;  1W3P A;  2AQ6 A;  3U5W A;  2RE7 A;  2X1K A;  1WV4 A;  4Z85 A;  3U34 A;  2HTD A;  1WGB A;  3CB0 A;  2IAB A;  2QCK A;  2I02 A; 
#chains in the Genus database with same CATH topology
 2E83 A;  1DNL A;  3R5W A;  4HMT A;  3ZOC A;  4QVB A;  2HQ9 A;  1RZ1 A;  1XHN A;  2OL5 A;  3BPK A;  2R6V A;  3R5Z A;  3ZOF A;  3B5M A;  4R82 A;  4F07 A;  2ECR A;  3KYG A;  4HMX A;  4HMW A;  4XJ2 A;  3K86 A;  2PTF A;  2P5Z X;  3FKH A;  3A6R A;  1CI0 A;  1USF A;  2ED4 A;  2RDE A;  3PFT A;  4HMV A;  4XHY A;  3A6Q A;  3DB0 A;  3HY8 A;  2FUR A;  3AMF A;  3HMZ A;  2A2J A;  1RZ0 A;  1G79 A;  2HQ7 A;  3K88 A;  5JAB A;  2IG6 A;  3EAA A;  1VL7 A;  3R5Y A;  2NR4 A;  3K87 A;  4YWN A;  4UHV A;  1YOA A;  1USC A;  3RH7 A;  3EC6 A;  3DNH A;  4N7R C;  3H96 A;  3VY2 A;  1I0R A;  1WLI A;  1I0S A;  3A20 A;  3VY5 A;  1JNW A;  5ESC A;  1G76 A;  2Q9K A;  2D5M A;  2ASF A;  2D38 A;  3CP3 A;  3GAS A;  3IN6 A;  5CHE C;  3NFW A;  2R0X A;  2FG9 A;  1Y12 A;  3DMB A;  1G77 A;  2GUJ A;  2D37 A;  3BNK A;  2ARZ A;  3AWH A;  2IML A;  4HMS A;  3V4H A;  3KYF A;  2VPA A;  3U0I A;  2HTI A;  2L1T A;  1RFE A;  1G78 A;  3U35 A;  1XXO A;  4Y9I A;  3FGE A;  1EJE A;  4W64 A;  4MTK A;  4IRA A;  4YBN A;  4ZKY A;  3ZOH A;  3SWJ A;  1Y30 A;  2D36 A;  3F7E A;  1T9M A;  2X1J A;  1W3Q A;  2OU5 A;  2K4Q A;  5CHO A;  2QEA A;  4TV4 A;  1WLK A;  1NRG A;  1W3R A;  3R5R A;  3E4V A;  4HX6 A;  3TGV A;  3ZOD A;  2I51 A;  2GJG A;  3ZOE A;  1FLM A;  4HMU A;  4L82 A;  2ECU A;  3R5L A;  3HE1 A;  2HHZ A;  1W3O A;  3VYA A;  3ZOG A;  2FHQ A;  3R5P A;  1TY9 A;  1AXJ A;  3BA3 A;  5BNC A;  1YLN A;  1W9A A;  1W3P A;  2AQ6 A;  3U5W A;  2RE7 A;  4HKH A;  2X1K A;  1WV4 A;  4Z85 A;  3U34 A;  2HTD A;  1WGB A;  3CB0 A;  2IAB A;  2QCK A;  2I02 A; 
#chains in the Genus database with same CATH homology
 2E83 A;  1DNL A;  3R5W A;  4HMT A;  3ZOC A;  4QVB A;  2HQ9 A;  1RZ1 A;  1XHN A;  2OL5 A;  3BPK A;  2R6V A;  3R5Z A;  3ZOF A;  3B5M A;  4R82 A;  4F07 A;  2ECR A;  3KYG A;  4HMX A;  4HMW A;  4XJ2 A;  3K86 A;  2PTF A;  3FKH A;  3A6R A;  1CI0 A;  1USF A;  2ED4 A;  2RDE A;  3PFT A;  4HMV A;  4XHY A;  3A6Q A;  3DB0 A;  3HY8 A;  2FUR A;  3AMF A;  3HMZ A;  2A2J A;  1RZ0 A;  1G79 A;  2HQ7 A;  3K88 A;  5JAB A;  2IG6 A;  1VL7 A;  3R5Y A;  2NR4 A;  3K87 A;  4YWN A;  1YOA A;  1USC A;  3RH7 A;  3EC6 A;  3DNH A;  4N7R C;  3H96 A;  3VY2 A;  1I0R A;  1WLI A;  1I0S A;  3A20 A;  3VY5 A;  1JNW A;  5ESC A;  1G76 A;  2Q9K A;  2D5M A;  2ASF A;  2D38 A;  3CP3 A;  3GAS A;  3IN6 A;  5CHE C;  3NFW A;  2R0X A;  2FG9 A;  3DMB A;  1G77 A;  3BNK A;  2D37 A;  4HMS A;  2ARZ A;  3AWH A;  2IML A;  3KYF A;  2VPA A;  3U0I A;  2HTI A;  1RFE A;  1G78 A;  3U35 A;  1XXO A;  4Y9I A;  3FGE A;  1EJE A;  4IRA A;  4YBN A;  4ZKY A;  3ZOH A;  3SWJ A;  1Y30 A;  2D36 A;  3F7E A;  2X1J A;  1T9M A;  1W3Q A;  2OU5 A;  5CHO A;  2QEA A;  1WLK A;  1NRG A;  1W3R A;  3R5R A;  3E4V A;  4HX6 A;  3TGV A;  3ZOD A;  2I51 A;  2GJG A;  3ZOE A;  1FLM A;  4HMU A;  4L82 A;  2ECU A;  3R5L A;  2HHZ A;  1W3O A;  3VYA A;  3ZOG A;  2FHQ A;  3R5P A;  1TY9 A;  1AXJ A;  3BA3 A;  5BNC A;  1YLN A;  1W9A A;  1W3P A;  2AQ6 A;  3U5W A;  2RE7 A;  2X1K A;  1WV4 A;  4Z85 A;  3U34 A;  2HTD A;  1WGB A;  3CB0 A;  2IAB A;  2QCK A;  2I02 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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