4IYSA

Structural and ligand binding properties of the bateman domain of human magnesium transporters cnnm2 and cnnm4
Total Genus 44
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
44
sequence length
156
structure length
155
Chain Sequence
MEELNIIQGALELRTKTVEDVMTPLRDCFMITGEAILDFNTMSEIMESGYTRIPVFEGERSNIVDLLFVKDLAFVDPDDCTPLKTITKFYNHPLHFVFNDTKLDAMLEEFKKGKSHLAIVQRVNNEGEDPFYEVLGIVTLEDVIEEIIKSEILDE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Metal transport
molecule keywords Metal transporter CNNM2
publication title Structural and ligand binding properties of the Bateman domain of human magnesium transporters CNNM2 and CNNM4
rcsb
source organism Homo sapiens
total genus 44
structure length 155
sequence length 156
ec nomenclature
pdb deposition date 2013-01-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00571 CBS CBS domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.10.580.10 Alpha Beta Roll CBS-domain CBS-domain 4iysA00
3OI8A 2YVZA 2ZY9A 3LHHA 4GQWA 3T4NC 4UUUA 3KH5A 4IYSA 3ORGA 2EMQA 4P1OA 2QH1A 3PC2A 3PC3A 4DQWA 2RIFA 3FNAA 3LV9A 4FRYA 4IY2A 3TDHC 1PBJA 3FHMA 3PC4A 2UV5A 4NOCA 5K25C 2QR1E 3HF7A 4IY4A 3KPCA 2OOXE 4O9KA 2OOYE 2RC3A 3GBYA 2RIHA 2O16A 2YVYA 2NYEA 2EF7A 4FXSA 5LXQA 3L31A 4PCUA 2UV7A 2QRDE 4ESYB 1XKFA 1PVMA 3SL7A 2YZIA 3KPDA 3KXRA 4L28A 4L0DA 3K6EA 3FV6A 2QRCE 3FWSA 3I8NA 4ESYA 2PFIA 4IY3A 4COOA 2NYCA 3K2VA 3OCMA 5KS7A 2QLVC 2YZQA 5K22B 3OCOA 5K24C 3TE5C 2YVXA 2OUXA 3DDJA 3FWRA 5MMZA 4L3VA 2P9MA 5K23C 3LFZA 4GQYA 2QREE 2UV6A 4P1GA 1Y5HA 3L2BA 2D4ZA 4GQVA 1O50A 4HG0A 2UV4A 4L27A 5IIPA 1YAVA 4IY0A 3KPBA 3LQNA
chains in the Genus database with same CATH superfamily
3OI8A 2YVZA 2ZY9A 3LHHA 4GQWA 3T4NC 2JA3A 4UUUA 3KH5A 4IYSA 3ORGA 2EMQA 4P1OA 2QH1A 3PC2A 3PC3A 4DQWA 2RIFA 3FNAA 3LV9A 4FRYA 4IY2A 3TDHC 1PBJA 3FHMA 3PC4A 2UV5A 4NOCA 5K25C 2QR1E 3HF7A 4IY4A 3KPCA 2OOXE 4O9KA 2OOYE 2RC3A 3GBYA 2RIHA 2O16A 2YVYA 2NYEA 2EF7A 4FXSA 5LXQA 3L31A 4PCUA 2UV7A 2QRDE 4ESYB 1XKFA 1PVMA 3SL7A 2YZIA 3KPDA 3KXRA 4L28A 4L0DA 3K6EA 3FV6A 2QRCE 3FWSA 3I8NA 4ESYA 2PFIA 4IY3A 4COOA 2NYCA 3K2VA 3OCMA 5KS7A 2QLVC 2YZQA 5K22B 3OCOA 5K24C 3TE5C 2J9LA 2YVXA 2OUXA 3DDJA 3FWRA 5MMZA 4L3VA 2P9MA 5K23C 3LFZA 4GQYA 2QREE 2UV6A 4P1GA 1Y5HA 3L2BA 2D4ZA 4GQVA 1O50A 4HG0A 2UV4A 4L27A 5IIPA 1YAVA 4IY0A 3KPBA 3LQNA
chains in the Genus database with same CATH topology
3OI8A 2YVZA 2ZY9A 3LHHA 4GQWA 3T4NC 2JA3A 4UUUA 3KH5A 4IYSA 3ORGA 2EMQA 4P1OA 2QH1A 3PC2A 3PC3A 4DQWA 2RIFA 3FNAA 3LV9A 4FRYA 4IY2A 3TDHC 1PBJA 3FHMA 3PC4A 2UV5A 4NOCA 5K25C 2QR1E 3HF7A 4IY4A 3KPCA 2OOXE 4O9KA 2OOYE 2RC3A 3GBYA 2RIHA 2O16A 2YVYA 2NYEA 2EF7A 4FXSA 5LXQA 3L31A 4PCUA 2UV7A 2QRDE 4ESYB 1XKFA 1PVMA 3SL7A 2YZIA 3KPDA 3KXRA 4L28A 4L0DA 3K6EA 3FV6A 2QRCE 3FWSA 3I8NA 4ESYA 2PFIA 4IY3A 4COOA 2NYCA 3K2VA 3OCMA 5KS7A 2QLVC 2YZQA 5K22B 3OCOA 5K24C 3TE5C 2J9LA 2YVXA 2OUXA 3DDJA 3FWRA 5MMZA 4L3VA 2P9MA 5K23C 3LFZA 4GQYA 2QREE 2UV6A 4P1GA 1Y5HA 3L2BA 2D4ZA 4GQVA 1O50A 4HG0A 2UV4A 4L27A 5IIPA 1YAVA 4IY0A 3KPBA 3LQNA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3OI8 A;  2YVZ A;  2ZY9 A;  3LHH A;  4GQW A;  3T4N C;  4UUU A;  3KH5 A;  4IYS A;  3ORG A;  2EMQ A;  4P1O A;  2QH1 A;  3PC2 A;  3PC3 A;  4DQW A;  2RIF A;  3FNA A;  3LV9 A;  4FRY A;  4IY2 A;  3TDH C;  1PBJ A;  3FHM A;  3PC4 A;  2UV5 A;  4NOC A;  5K25 C;  2QR1 E;  3HF7 A;  4IY4 A;  3KPC A;  2OOX E;  4O9K A;  2OOY E;  2RC3 A;  3GBY A;  2RIH A;  2O16 A;  2YVY A;  2NYE A;  2EF7 A;  4FXS A;  5LXQ A;  3L31 A;  4PCU A;  2UV7 A;  2QRD E;  4ESY B;  1XKF A;  1PVM A;  3SL7 A;  2YZI A;  3KPD A;  3KXR A;  4L28 A;  4L0D A;  3K6E A;  3FV6 A;  2QRC E;  3FWS A;  3I8N A;  4ESY A;  2PFI A;  4IY3 A;  4COO A;  2NYC A;  3K2V A;  3OCM A;  5KS7 A;  2QLV C;  2YZQ A;  5K22 B;  3OCO A;  5K24 C;  3TE5 C;  2YVX A;  2OUX A;  3DDJ A;  3FWR A;  5MMZ A;  4L3V A;  2P9M A;  5K23 C;  3LFZ A;  4GQY A;  2QRE E;  2UV6 A;  4P1G A;  1Y5H A;  3L2B A;  2D4Z A;  4GQV A;  1O50 A;  4HG0 A;  2UV4 A;  4L27 A;  5IIP A;  1YAV A;  4IY0 A;  3KPB A;  3LQN A; 
#chains in the Genus database with same CATH topology
 3OI8 A;  2YVZ A;  2ZY9 A;  3LHH A;  4GQW A;  3T4N C;  2JA3 A;  4UUU A;  3KH5 A;  4IYS A;  3ORG A;  2EMQ A;  4P1O A;  2QH1 A;  3PC2 A;  3PC3 A;  4DQW A;  2RIF A;  3FNA A;  3LV9 A;  4FRY A;  4IY2 A;  3TDH C;  1PBJ A;  3FHM A;  3PC4 A;  2UV5 A;  4NOC A;  5K25 C;  2QR1 E;  3HF7 A;  4IY4 A;  3KPC A;  2OOX E;  4O9K A;  2OOY E;  2RC3 A;  3GBY A;  2RIH A;  2O16 A;  2YVY A;  2NYE A;  2EF7 A;  4FXS A;  5LXQ A;  3L31 A;  4PCU A;  2UV7 A;  2QRD E;  4ESY B;  1XKF A;  1PVM A;  3SL7 A;  2YZI A;  3KPD A;  3KXR A;  4L28 A;  4L0D A;  3K6E A;  3FV6 A;  2QRC E;  3FWS A;  3I8N A;  4ESY A;  2PFI A;  4IY3 A;  4COO A;  2NYC A;  3K2V A;  3OCM A;  5KS7 A;  2QLV C;  2YZQ A;  5K22 B;  3OCO A;  5K24 C;  3TE5 C;  2J9L A;  2YVX A;  2OUX A;  3DDJ A;  3FWR A;  5MMZ A;  4L3V A;  2P9M A;  5K23 C;  3LFZ A;  4GQY A;  2QRE E;  2UV6 A;  4P1G A;  1Y5H A;  3L2B A;  2D4Z A;  4GQV A;  1O50 A;  4HG0 A;  2UV4 A;  4L27 A;  5IIP A;  1YAV A;  4IY0 A;  3KPB A;  3LQN A; 
#chains in the Genus database with same CATH homology
 3OI8 A;  2YVZ A;  2ZY9 A;  3LHH A;  4GQW A;  3T4N C;  2JA3 A;  4UUU A;  3KH5 A;  4IYS A;  3ORG A;  2EMQ A;  4P1O A;  2QH1 A;  3PC2 A;  3PC3 A;  4DQW A;  2RIF A;  3FNA A;  3LV9 A;  4FRY A;  4IY2 A;  3TDH C;  1PBJ A;  3FHM A;  3PC4 A;  2UV5 A;  4NOC A;  5K25 C;  2QR1 E;  3HF7 A;  4IY4 A;  3KPC A;  2OOX E;  4O9K A;  2OOY E;  2RC3 A;  3GBY A;  2RIH A;  2O16 A;  2YVY A;  2NYE A;  2EF7 A;  4FXS A;  5LXQ A;  3L31 A;  4PCU A;  2UV7 A;  2QRD E;  4ESY B;  1XKF A;  1PVM A;  3SL7 A;  2YZI A;  3KPD A;  3KXR A;  4L28 A;  4L0D A;  3K6E A;  3FV6 A;  2QRC E;  3FWS A;  3I8N A;  4ESY A;  2PFI A;  4IY3 A;  4COO A;  2NYC A;  3K2V A;  3OCM A;  5KS7 A;  2QLV C;  2YZQ A;  5K22 B;  3OCO A;  5K24 C;  3TE5 C;  2J9L A;  2YVX A;  2OUX A;  3DDJ A;  3FWR A;  5MMZ A;  4L3V A;  2P9M A;  5K23 C;  3LFZ A;  4GQY A;  2QRE E;  2UV6 A;  4P1G A;  1Y5H A;  3L2B A;  2D4Z A;  4GQV A;  1O50 A;  4HG0 A;  2UV4 A;  4L27 A;  5IIP A;  1YAV A;  4IY0 A;  3KPB A;  3LQN A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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