4J2VA

Crystal structure of equine serum albumin in complex with 3,5-diiodosalicylic acid
Total Genus 256
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
256
sequence length
581
structure length
581
Chain Sequence
HKSEIAHRFNDLGEKHFKGLVLVAFSQYLQQCPFEDHVKLVNEVTEFAKKCAADESAENCDKSLHTLFGDKLCTVATLRATYGELADCCEKQEPERNECFLTHKDDHPNLPKLKPEPDAQCAAFQEDPDKFLGKYLYEVARRHPYFYGPELLFHAEEYKADFTECCPADDKLACLIPKLDALKERILLSSAKERLKCSSFQNFGERAVKAWSVARLSQKFPKADFAEVSKIVTDLTKVHKECCHGDLLECADDRADLAKYICEHQDSISGKLKACCDKPLLQKSHCIAEVKEDDLPSDLPALAADFAEDKEICKHYKDAKDVFLGTFLYEYSRRHPDYSVSLLLRIAKTYEATLEKCCAEADPPACYRTVFDQFTPLVEEPKSLVKKNCDLFEEVGEYDFQNALIVRYTKKAPQVSTPTLVEIGRTLGKVGSRCCKLPESERLPCSENHLALALNRLCVLHEKTPVSEKITKCCTDSLAERRPCFSALELDEGYVPKEFKAETFTFHADICTLPEDEKQIKKQSALAELVKHKPKATKEQLKTVLGNFSAFVAKCCGREDKEACFAEEGPKLVASSQLALA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transport protein
molecule keywords Serum albumin
publication title Crystallographic studies of the complexes of bovine and equine serum albumin with 3,5-diiodosalicylic acid.
pubmed doi rcsb
total genus 256
structure length 581
sequence length 581
ec nomenclature
pdb deposition date 2013-02-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4j2vA03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4j2vA02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4j2vA04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4j2vA01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4j2vA06
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4j2vA05
1HK1A 3TDLA 2XW1A 2XVWA 3V08A 5FUOA 2XVQA 4BKEA 1N5UA 2BXAA 3SQJA 3LU8A 3JRYA 1LOTA 1HK3A 4LUFA 2XW0A 2BXEA 1E7IA 5IJ5A 4Z69A 2VUEA 4F5UA 4G03A 4K2CA 4LUHA 4S1YA 4ZBQA 4F5SA 1E7FA 2XVVA 5IIHA 1E7CA 2I30A 2VUFA 3B9LA 5DQFA 2BXNA 4HGMB 5IJFA 1E7BA 1HK2A 3V03A 2BX8A 5IJEA 4HGKA 1J78A 2I2ZA 1J7EA 1E7AA 2BXBA 3LU7A 1O9XA 2BXIA 1HK5A 3JQZA 3V09A 5GHKA 1MA9A 2BXLA 1GNJA 4IW1A 2BXCA 2BXQA 1BKEA 4JK4A 4E99A 1HA2A 2XVUA 4F5TA 2XSIA 1KXPD 4L9QA 1E7EA 4G04A 5IFOA 2BXDA 3UIVA 1TF0A 2BXFA 4ZBRA 4LB2A 4F5VA 1HK4A 3A73A 3CX9A 4J2VA 4L9KA 3B9MA 4N0UD 4LB9A 1H9ZA 1E7GA 2VDBA 2BXGA 1KW2A 5DBYA 4PO0A 1BJ5A 2BXHA 2BXKA 1GNIA 1E7HA 2BXMA 1AO6A 4IW2A 4N0FD 4L8UA 4OR0A 4EMXA 1UORA 4LA0A 5IIUA 2BXPA 5ID9A 4OT2A 5HOZA 5IIXA 1E78A 1BM0A 4K71A 2YDFA 2BXOA 3LU6A 5ID7A
chains in the Genus database with same CATH superfamily
1HK1A 1MUHA 3TDLA 2XW1A 1LNSA 2XVWA 3V08A 5FUOA 2XVQA 1SB0A 4BKEA 1N5UA 4WA6B 4FJCB 4ZC6A 2BXAA 1MIWA 3SQJA 1TXUA 2DBUA 3LU8A 2KBZA 3JRYA 1LOTA 3WHSA 3NVKA 3BPJA 1HK3A 3SIVB 4LUFA 2XW0A 2BXEA 1E7IA 2GUTA 2LQHA 5IJ5A 4TQ0A 3NVIA 4Z69A 3SIUB 4GG2A 4TQ1A 2VUEA 3MHSB 2EFHA 4F5UA 2V36A 4G03A 4G01A 3G9KD 1JNBA 5GIOA 4K2CA 2CKXA 4LUHA 4S1YA 4ZBQA 1MIYA 4F5SA 1E7FA 2XVVA 5IIHA 3ECPA 2K0NA 3VQIA 4C31B 3MHHB 1E7CA 2DYOA 4DHXB 2I30A 4N3ZA 2VUFA 3B9LA 5DQFA 2BXNA 4HGMB 5IJFA 3NVMA 1E7BA 1HK2A 3FNMA 3V03A 2BX8A 5IJEA 4HGKA 1J78A 2I2ZA 1H5WA 2NQOA 2OZBB 1J7EA 2ROHA 1E7AA 2BXBA 2LOQA 2Z8KA 1NT2B 1O9XA 2BXIA 3LU7A 1HK5A 3JQZA 2OT3A 3V09A 5GHKA 1MA9A 2BXLA 3GQUA 3LU6A 4BY9C 2QMCA 2JUHA 4NAWB 4OTTA 1GNJA 3M99C 2EFDA 3FWBC 4IW1A 2BXCA 3W1SA 5BPKA 2BXQA 1BKEA 1IJGA 1FOUA 4MBEC 4JK4A 4ZCGA 3KIKA 4GDKB 4E99A 1HA2A 2XVUA 2NNWA 4I9OA 4FIPB 4F5TA 1KXPD 2XSIA 2KWFA 4L9QA 1E7EA 2DYMA 3FWCC 3ICXA 4G04A 5GIPA 4ZBKA 5IFOA 2BXDA 5D7GA 3UIVA 1TF0A 2DBWA 3GA9L 4ZUXV 2BXFA 4ZBRA 4LB2A 3NMUA 4W4UB 1HK4A 3A73A 3CX9A 4GDLB 3GQXA 4J2VA 4L9KA 1VZSA 4F5VA 2QHBA 3B9MA 2AGHB 2Z8JA 4D7XA 5GINA 4N0UD 1VFIA 4LB9A 4OTUA 1H9ZA 1E7GA 4M70B 2AJEA 4GDXA 2BXGA 2VDBA 1KW2A 3H3AA 5DBYA 3WHRA 1MM8A 4PO0A 4FK5B 1BJ5A 2BXHA 2LQIA 2BXKA 1GNIA 2E0YA 2EFEA 3PLAA 2E0XA 2QM6A 1E7HA 2BXMA 2DBXA 2Z8IA 2XMOA 4IW2A 4N0FD 4L8UA 1AO6A 2DG5A 3WHQA 4OR0A 4EMXA 3A75A 1UORA 1MIVA 2EFCA 4Z9OA 2LXTA 4LA0A 3KJLA 5IIUA 2BXPA 5ID9A 4OT2A 5HOZA 5IIXA 1MUSA 3H37A 1E78A 1KDXA 4DM0A 5B5TA 1BM0A 4K71A 2YDFA 2BXOA 2LXSA 5ID7A
chains in the Genus database with same CATH topology
1HK1A 3TDLA 2XW1A 1LNSA 2XVWA 3V08A 5FUOA 2XVQA 4BKEA 1N5UA 4WA6B 4FJCB 4ZC6A 2BXAA 1MIWA 3SQJA 1TXUA 2DBUA 3LU8A 2KBZA 3JRYA 1LOTA 3WHSA 3NVKA 3SIVB 1HK3A 4LUFA 2XW0A 2BXEA 1E7IA 5IJ5A 4TQ0A 3SIUB 3NVIA 4Z69A 4GG2A 4TQ1A 2VUEA 3MHSB 2EFHA 4F5UA 2V36A 4G03A 4G01A 3G9KD 1JNBA 5GIOA 4K2CA 2CKXA 4LUHA 4S1YA 4ZBQA 1MIYA 4F5SA 1E7FA 2XVVA 5IIHA 3VQIA 4C31B 3MHHB 1E7CA 2DYOA 4DHXB 2I30A 4N3ZA 2VUFA 3B9LA 5DQFA 2BXNA 4HGMB 5IJFA 3NVMA 1E7BA 1HK2A 3FNMA 3V03A 2BX8A 5IJEA 4HGKA 1J78A 2I2ZA 1H5WA 2NQOA 2OZBB 1J7EA 2ROHA 1E7AA 2BXBA 2LOQA 2Z8KA 1NT2B 1O9XA 2BXIA 3LU7A 1HK5A 3JQZA 2OT3A 3V09A 5GHKA 1MA9A 2BXLA 3GQUA 4BY9C 2QMCA 2JUHA 4NAWB 4OTTA 1GNJA 3M99C 2EFDA 3FWBC 4IW1A 2BXCA 3W1SA 5BPKA 2BXQA 1BKEA 1IJGA 1FOUA 4MBEC 4JK4A 4ZCGA 3KIKA 4GDKB 4E99A 1HA2A 2XVUA 2NNWA 4FIPB 4F5TA 1KXPD 2XSIA 4L9QA 1E7EA 2DYMA 3FWCC 3ICXA 4G04A 5GIPA 4ZBKA 5IFOA 2BXDA 5D7GA 3UIVA 1TF0A 2DBWA 3GA9L 4ZUXV 2BXFA 4ZBRA 4LB2A 3NMUA 4W4UB 1HK4A 3A73A 3CX9A 4GDLB 3GQXA 4J2VA 4L9KA 1VZSA 4F5VA 2QHBA 3B9MA 2Z8JA 5GINA 4N0UD 1VFIA 4LB9A 4OTUA 1H9ZA 1E7GA 4M70B 2AJEA 4GDXA 2BXGA 2VDBA 1KW2A 3H3AA 5DBYA 3WHRA 4PO0A 4FK5B 1BJ5A 2BXHA 2BXKA 1GNIA 2E0YA 2EFEA 3PLAA 2E0XA 2QM6A 1E7HA 2BXMA 2DBXA 2Z8IA 2XMOA 4IW2A 4N0FD 4L8UA 1AO6A 2DG5A 3WHQA 4OR0A 4EMXA 3A75A 1UORA 1MIVA 2EFCA 4Z9OA 4LA0A 3KJLA 5IIUA 2BXPA 5ID9A 4OT2A 5HOZA 5IIXA 3H37A 1E78A 5B5TA 1BM0A 4K71A 2YDFA 2BXOA 3LU6A 5ID7A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1HK1 A;  3TDL A;  2XW1 A;  2XVW A;  3V08 A;  5FUO A;  2XVQ A;  4BKE A;  1N5U A;  2BXA A;  3SQJ A;  3LU8 A;  3JRY A;  1LOT A;  1HK3 A;  4LUF A;  2XW0 A;  2BXE A;  1E7I A;  5IJ5 A;  4Z69 A;  2VUE A;  4F5U A;  4G03 A;  4K2C A;  4LUH A;  4S1Y A;  4ZBQ A;  4F5S A;  1E7F A;  2XVV A;  5IIH A;  1E7C A;  2I30 A;  2VUF A;  3B9L A;  5DQF A;  2BXN A;  4HGM B;  5IJF A;  1E7B A;  1HK2 A;  3V03 A;  2BX8 A;  5IJE A;  4HGK A;  1J78 A;  2I2Z A;  1J7E A;  1E7A A;  2BXB A;  3LU7 A;  1O9X A;  2BXI A;  1HK5 A;  3JQZ A;  3V09 A;  5GHK A;  1MA9 A;  2BXL A;  1GNJ A;  4IW1 A;  2BXC A;  2BXQ A;  1BKE A;  4JK4 A;  4E99 A;  1HA2 A;  2XVU A;  4F5T A;  2XSI A;  1KXP D;  4L9Q A;  1E7E A;  4G04 A;  5IFO A;  2BXD A;  3UIV A;  1TF0 A;  2BXF A;  4ZBR A;  4LB2 A;  4F5V A;  1HK4 A;  3A73 A;  3CX9 A;  4J2V A;  4L9K A;  3B9M A;  4N0U D;  4LB9 A;  1H9Z A;  1E7G A;  2VDB A;  2BXG A;  1KW2 A;  5DBY A;  4PO0 A;  1BJ5 A;  2BXH A;  2BXK A;  1GNI A;  1E7H A;  2BXM A;  1AO6 A;  4IW2 A;  4N0F D;  4L8U A;  4OR0 A;  4EMX A;  1UOR A;  4LA0 A;  5IIU A;  2BXP A;  5ID9 A;  4OT2 A;  5HOZ A;  5IIX A;  1E78 A;  1BM0 A;  4K71 A;  2YDF A;  2BXO A;  3LU6 A;  5ID7 A; 
#chains in the Genus database with same CATH topology
 1HK1 A;  1MUH A;  3TDL A;  2XW1 A;  1LNS A;  2XVW A;  3V08 A;  5FUO A;  2XVQ A;  1SB0 A;  4BKE A;  1N5U A;  4WA6 B;  4FJC B;  4ZC6 A;  2BXA A;  1MIW A;  3SQJ A;  1TXU A;  2DBU A;  3LU8 A;  2KBZ A;  3JRY A;  1LOT A;  3WHS A;  3NVK A;  3BPJ A;  1HK3 A;  3SIV B;  4LUF A;  2XW0 A;  2BXE A;  1E7I A;  2GUT A;  2LQH A;  5IJ5 A;  4TQ0 A;  3NVI A;  4Z69 A;  3SIU B;  4GG2 A;  4TQ1 A;  2VUE A;  3MHS B;  2EFH A;  4F5U A;  2V36 A;  4G03 A;  4G01 A;  3G9K D;  1JNB A;  5GIO A;  4K2C A;  2CKX A;  4LUH A;  4S1Y A;  4ZBQ A;  1MIY A;  4F5S A;  1E7F A;  2XVV A;  5IIH A;  3ECP A;  2K0N A;  3VQI A;  4C31 B;  3MHH B;  1E7C A;  2DYO A;  4DHX B;  2I30 A;  4N3Z A;  2VUF A;  3B9L A;  5DQF A;  2BXN A;  4HGM B;  5IJF A;  3NVM A;  1E7B A;  1HK2 A;  3FNM A;  3V03 A;  2BX8 A;  5IJE A;  4HGK A;  1J78 A;  2I2Z A;  1H5W A;  2NQO A;  2OZB B;  1J7E A;  2ROH A;  1E7A A;  2BXB A;  2LOQ A;  2Z8K A;  1NT2 B;  1O9X A;  2BXI A;  3LU7 A;  1HK5 A;  3JQZ A;  2OT3 A;  3V09 A;  5GHK A;  1MA9 A;  2BXL A;  3GQU A;  3LU6 A;  4BY9 C;  2QMC A;  2JUH A;  4NAW B;  4OTT A;  1GNJ A;  3M99 C;  2EFD A;  3FWB C;  4IW1 A;  2BXC A;  3W1S A;  5BPK A;  2BXQ A;  1BKE A;  1IJG A;  1FOU A;  4MBE C;  4JK4 A;  4ZCG A;  3KIK A;  4GDK B;  4E99 A;  1HA2 A;  2XVU A;  2NNW A;  4I9O A;  4FIP B;  4F5T A;  1KXP D;  2XSI A;  2KWF A;  4L9Q A;  1E7E A;  2DYM A;  3FWC C;  3ICX A;  4G04 A;  5GIP A;  4ZBK A;  5IFO A;  2BXD A;  5D7G A;  3UIV A;  1TF0 A;  2DBW A;  3GA9 L;  4ZUX V;  2BXF A;  4ZBR A;  4LB2 A;  3NMU A;  4W4U B;  1HK4 A;  3A73 A;  3CX9 A;  4GDL B;  3GQX A;  4J2V A;  4L9K A;  1VZS A;  4F5V A;  2QHB A;  3B9M A;  2AGH B;  2Z8J A;  4D7X A;  5GIN A;  4N0U D;  1VFI A;  4LB9 A;  4OTU A;  1H9Z A;  1E7G A;  4M70 B;  2AJE A;  4GDX A;  2BXG A;  2VDB A;  1KW2 A;  3H3A A;  5DBY A;  3WHR A;  1MM8 A;  4PO0 A;  4FK5 B;  1BJ5 A;  2BXH A;  2LQI A;  2BXK A;  1GNI A;  2E0Y A;  2EFE A;  3PLA A;  2E0X A;  2QM6 A;  1E7H A;  2BXM A;  2DBX A;  2Z8I A;  2XMO A;  4IW2 A;  4N0F D;  4L8U A;  1AO6 A;  2DG5 A;  3WHQ A;  4OR0 A;  4EMX A;  3A75 A;  1UOR A;  1MIV A;  2EFC A;  4Z9O A;  2LXT A;  4LA0 A;  3KJL A;  5IIU A;  2BXP A;  5ID9 A;  4OT2 A;  5HOZ A;  5IIX A;  1MUS A;  3H37 A;  1E78 A;  1KDX A;  4DM0 A;  5B5T A;  1BM0 A;  4K71 A;  2YDF A;  2BXO A;  2LXS A;  5ID7 A; 
#chains in the Genus database with same CATH homology
 1HK1 A;  3TDL A;  2XW1 A;  1LNS A;  2XVW A;  3V08 A;  5FUO A;  2XVQ A;  4BKE A;  1N5U A;  4WA6 B;  4FJC B;  4ZC6 A;  2BXA A;  1MIW A;  3SQJ A;  1TXU A;  2DBU A;  3LU8 A;  2KBZ A;  3JRY A;  1LOT A;  3WHS A;  3NVK A;  3SIV B;  1HK3 A;  4LUF A;  2XW0 A;  2BXE A;  1E7I A;  5IJ5 A;  4TQ0 A;  3SIU B;  3NVI A;  4Z69 A;  4GG2 A;  4TQ1 A;  2VUE A;  3MHS B;  2EFH A;  4F5U A;  2V36 A;  4G03 A;  4G01 A;  3G9K D;  1JNB A;  5GIO A;  4K2C A;  2CKX A;  4LUH A;  4S1Y A;  4ZBQ A;  1MIY A;  4F5S A;  1E7F A;  2XVV A;  5IIH A;  3VQI A;  4C31 B;  3MHH B;  1E7C A;  2DYO A;  4DHX B;  2I30 A;  4N3Z A;  2VUF A;  3B9L A;  5DQF A;  2BXN A;  4HGM B;  5IJF A;  3NVM A;  1E7B A;  1HK2 A;  3FNM A;  3V03 A;  2BX8 A;  5IJE A;  4HGK A;  1J78 A;  2I2Z A;  1H5W A;  2NQO A;  2OZB B;  1J7E A;  2ROH A;  1E7A A;  2BXB A;  2LOQ A;  2Z8K A;  1NT2 B;  1O9X A;  2BXI A;  3LU7 A;  1HK5 A;  3JQZ A;  2OT3 A;  3V09 A;  5GHK A;  1MA9 A;  2BXL A;  3GQU A;  4BY9 C;  2QMC A;  2JUH A;  4NAW B;  4OTT A;  1GNJ A;  3M99 C;  2EFD A;  3FWB C;  4IW1 A;  2BXC A;  3W1S A;  5BPK A;  2BXQ A;  1BKE A;  1IJG A;  1FOU A;  4MBE C;  4JK4 A;  4ZCG A;  3KIK A;  4GDK B;  4E99 A;  1HA2 A;  2XVU A;  2NNW A;  4FIP B;  4F5T A;  1KXP D;  2XSI A;  4L9Q A;  1E7E A;  2DYM A;  3FWC C;  3ICX A;  4G04 A;  5GIP A;  4ZBK A;  5IFO A;  2BXD A;  5D7G A;  3UIV A;  1TF0 A;  2DBW A;  3GA9 L;  4ZUX V;  2BXF A;  4ZBR A;  4LB2 A;  3NMU A;  4W4U B;  1HK4 A;  3A73 A;  3CX9 A;  4GDL B;  3GQX A;  4J2V A;  4L9K A;  1VZS A;  4F5V A;  2QHB A;  3B9M A;  2Z8J A;  5GIN A;  4N0U D;  1VFI A;  4LB9 A;  4OTU A;  1H9Z A;  1E7G A;  4M70 B;  2AJE A;  4GDX A;  2BXG A;  2VDB A;  1KW2 A;  3H3A A;  5DBY A;  3WHR A;  4PO0 A;  4FK5 B;  1BJ5 A;  2BXH A;  2BXK A;  1GNI A;  2E0Y A;  2EFE A;  3PLA A;  2E0X A;  2QM6 A;  1E7H A;  2BXM A;  2DBX A;  2Z8I A;  2XMO A;  4IW2 A;  4N0F D;  4L8U A;  1AO6 A;  2DG5 A;  3WHQ A;  4OR0 A;  4EMX A;  3A75 A;  1UOR A;  1MIV A;  2EFC A;  4Z9O A;  4LA0 A;  3KJL A;  5IIU A;  2BXP A;  5ID9 A;  4OT2 A;  5HOZ A;  5IIX A;  3H37 A;  1E78 A;  5B5T A;  1BM0 A;  4K71 A;  2YDF A;  2BXO A;  3LU6 A;  5ID7 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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