4J38B

Structure of borrelia burgdorferi outer surface protein e in complex with factor h domains 19-20
Total Genus 21
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
21
sequence length
123
structure length
123
Chain Sequence
b'TGKCGPPPPIDNGGITSFPLSVYAPASSVEYQCANLYQLEGNKRITCRNGQWSEPPKCLHPCVISREIMENYNIALRWTAKQKLYSRTGESVEFVCKRGYRLSSRSHTLRTTCWDGKLEYPTC'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Outer surface protein E
publication title Structural Basis for Complement Evasion by Lyme Disease Pathogen Borrelia burgdorferi
pubmed doi rcsb
source organism Borrelia burgdorferi
molecule tags Immune system
total genus 21
structure length 123
sequence length 123
ec nomenclature
pdb deposition date 2013-02-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF00084 Sushi Sushi repeat (SCR repeat)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.70.10 Mainly Beta Ribbon Complement Module; domain 1 Complement Module, domain 1 4j38B01
2.10.70.10 Mainly Beta Ribbon Complement Module; domain 1 Complement Module, domain 1 4j38B02
4ONTD 5HYUB 1C1ZA 2JGWA 3ZD1A 2EHFA 4JHSA 2IZ3A 4KKDA 2EC3A 2RKYA 2B5ID 3GOVA 3ERBA 2W81A 3IU3I 5HZPB 3RJ3D 3KZJA 4K12A 4J38B 2YRAA 2LOJA 4CSYA 3IX0A 3INBC 4AYDA 5JPMG 4AYIA 2RLPA 2IZ4A 1LY2A 4B2SA 1H03P 1OK2A 5HYPA 1H04P 1VVCA 3OP8A 1Q3XA 1SRZA 1OJWA 1NWVA 5I0QB 3ZD2A 1E8BA 2WIIC 1QO6A 4WJG2 1HCCA 4ZH1D 2UWNA 3CALA 4LOTA 2KMSA 1FBRA 4B2RA 2CG6A 2CG7A 2YBYA 1MD7A 3MQLA 2MCZA 1E5GA 2XWBF 3OEDC 1CKLA 1QGBA 2XRDA 2XQWC 5FO8C 3T5OA 3R62A 2JRAA 1GKGA 1G4FA 4MUCA 1GHQB 2CKUA 2V8EA 1TPMA 2O39C 1HFIA 1TPNA 4YNXA 4PZ5A 4A5WB 1GKNA 4AYEA 3NFPI 2KRIA 2RKZA 1UOTP 3ZRZA 1OK3A 2XWJI 1HFHA 2ERJA 1O9AA 1SS2A 1QUBA 4IGDA 1H2PP 1E88A 2RL0A 4DJZA 1OK1A 3L89M 4FXGG 1OJYA 3SW0X 4C16A 1U5MA 2A55A 1OJVA 1ZJKA 2XRBA 1OK9A 1GPZA 1ELVA 1PPQA 2QY0A 3GXEA 4LOSA 2BZMA 3TVJA 3EJHA 4AYMA 4F4OC 3OXUD 5HYTB 1H2QP 1MD8A 2G7IA 3KXVA 2W80A 2JGXA 2RLQA 2MCYA 1VVDA 1G4GA 1Z92B 3M7PA 1TPGA 3O8EB
chains in the Genus database with same CATH superfamily
4ONTD 5HYUB 1C1ZA 2JGWA 3ZD1A 2EHFA 4JHSA 2IZ3A 4KKDA 2EC3A 2RKYA 2Y8RA 2B5ID 3GOVA 3K3TA 4APLA 3ERBA 2W81A 3IU3I 5HZPB 4PO7A 5DN5A 3RJ3D 3KZJA 4K12A 2Y8TA 4J38B 2YRAA 2LOJA 4CSYA 2ZYCA 3IX0A 3INBC 4AYDA 5JPMG 4AYIA 2RLPA 2IZ4A 4MSLA 1LY2A 4B2SA 1H03P 1OK2A 5HYPA 1H04P 1VVCA 3OP8A 1Q3XA 1SRZA 3FGRA 1RLHA 3NJAA 1OJWA 1NWVA 5I0QB 3ZD2A 1E8BA 2WIIC 1QO6A 4WJG2 1HCCA 4ZH1D 2UWNA 3CALA 4LOTA 2KMSA 1FBRA 4B2RA 2CG6A 3VWOA 2CG7A 2YBYA 2X2ZA 1MD7A 3MQLA 2MCZA 1E5GA 2XWBF 3OEDC 3ZLDA 1CKLA 1QGBA 2XRDA 2XQWC 5FO8C 3T5OA 3R62A 2JRAA 1GKGA 2I2LA 1G4FA 3F6KA 4MUCA 1GHQB 2CKUA 3WSXA 2V8EA 1TPMA 2O39C 1HFIA 1TPNA 4YNXA 4PZ5A 4A5WB 1GKNA 4AYEA 3NFPI 3WSYA 2KRIA 2RKZA 1UOTP 3ZRZA 1OK3A 2XWJI 1HFHA 2ERJA 1O9AA 4N7EA 1SS2A 3ZLEA 1QUBA 4IGDA 4BWCA 1H2PP 1E88A 2RL0A 4DJZA 3CI0J 3FGTA 1OK1A 3L89M 4FXGG 1OJYA 3SW0X 4C16A 1U5MA 2A55A 1OJVA 2Y8SA 1ZJKA 2XRBA 1OK9A 1GPZA 4YIZA 1ELVA 5DN4A 1PPQA 2QY0A 3GXEA 4LOSA 2BZMA 3TVJA 3EJHA 4AYMA 4F4OC 3OXUD 5HYTB 1H2QP 1MD8A 2G7IA 3KXVA 2W80A 2JGXA 2RLQA 2MCYA 1VVDA 1G4GA 1Z92B 3M7PA 1TPGA 3O8EB
chains in the Genus database with same CATH topology
4ONTD 5HYUB 1C1ZA 2JGWA 3ZD1A 2EHFA 4JHSA 2IZ3A 4KKDA 2EC3A 2RKYA 2B5ID 3GOVA 3ERBA 2W81A 3IU3I 5HZPB 3RJ3D 3KZJA 4K12A 4J38B 2YRAA 2LOJA 4CSYA 3IX0A 3INBC 4AYDA 5JPMG 4AYIA 2RLPA 2IZ4A 1LY2A 4B2SA 1H03P 1OK2A 5HYPA 1H04P 1VVCA 3OP8A 1Q3XA 1SRZA 1OJWA 1NWVA 5I0QB 3ZD2A 1E8BA 2WIIC 1QO6A 4WJG2 1HCCA 4ZH1D 2UWNA 3CALA 4LOTA 2KMSA 1FBRA 4B2RA 2CG6A 2CG7A 2YBYA 1MD7A 3MQLA 2MCZA 1E5GA 2XWBF 3OEDC 1CKLA 1QGBA 2XRDA 2XQWC 5FO8C 3T5OA 3R62A 2JRAA 1GKGA 1G4FA 4MUCA 1GHQB 2CKUA 2V8EA 1TPMA 2O39C 1HFIA 1TPNA 4YNXA 4PZ5A 4A5WB 1GKNA 4AYEA 3NFPI 2KRIA 2RKZA 1UOTP 3ZRZA 1OK3A 2XWJI 1HFHA 2ERJA 1O9AA 1SS2A 1QUBA 4IGDA 1H2PP 1E88A 2RL0A 4DJZA 1OK1A 3L89M 4FXGG 1OJYA 3SW0X 4C16A 1U5MA 2A55A 1OJVA 1ZJKA 2XRBA 1OK9A 1GPZA 1ELVA 1PPQA 2QY0A 3GXEA 4LOSA 2BZMA 3TVJA 3EJHA 4AYMA 4F4OC 3OXUD 5HYTB 1H2QP 1MD8A 2G7IA 3KXVA 2W80A 2JGXA 2RLQA 2MCYA 1VVDA 1G4GA 1Z92B 3M7PA 1TPGA 3O8EB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4ONT D;  5HYU B;  1C1Z A;  2JGW A;  3ZD1 A;  2EHF A;  4JHS A;  2IZ3 A;  4KKD A;  2EC3 A;  2RKY A;  2B5I D;  3GOV A;  3ERB A;  2W81 A;  3IU3 I;  5HZP B;  3RJ3 D;  3KZJ A;  4K12 A;  4J38 B;  2YRA A;  2LOJ A;  4CSY A;  3IX0 A;  3INB C;  4AYD A;  5JPM G;  4AYI A;  2RLP A;  2IZ4 A;  1LY2 A;  4B2S A;  1H03 P;  1OK2 A;  5HYP A;  1H04 P;  1VVC A;  3OP8 A;  1Q3X A;  1SRZ A;  1OJW A;  1NWV A;  5I0Q B;  3ZD2 A;  1E8B A;  2WII C;  1QO6 A;  4WJG 2;  1HCC A;  4ZH1 D;  2UWN A;  3CAL A;  4LOT A;  2KMS A;  1FBR A;  4B2R A;  2CG6 A;  2CG7 A;  2YBY A;  1MD7 A;  3MQL A;  2MCZ A;  1E5G A;  2XWB F;  3OED C;  1CKL A;  1QGB A;  2XRD A;  2XQW C;  5FO8 C;  3T5O A;  3R62 A;  2JRA A;  1GKG A;  1G4F A;  4MUC A;  1GHQ B;  2CKU A;  2V8E A;  1TPM A;  2O39 C;  1HFI A;  1TPN A;  4YNX A;  4PZ5 A;  4A5W B;  1GKN A;  4AYE A;  3NFP I;  2KRI A;  2RKZ A;  1UOT P;  3ZRZ A;  1OK3 A;  2XWJ I;  1HFH A;  2ERJ A;  1O9A A;  1SS2 A;  1QUB A;  4IGD A;  1H2P P;  1E88 A;  2RL0 A;  4DJZ A;  1OK1 A;  3L89 M;  4FXG G;  1OJY A;  3SW0 X;  4C16 A;  1U5M A;  2A55 A;  1OJV A;  1ZJK A;  2XRB A;  1OK9 A;  1GPZ A;  1ELV A;  1PPQ A;  2QY0 A;  3GXE A;  4LOS A;  2BZM A;  3TVJ A;  3EJH A;  4AYM A;  4F4O C;  3OXU D;  5HYT B;  1H2Q P;  1MD8 A;  2G7I A;  3KXV A;  2W80 A;  2JGX A;  2RLQ A;  2MCY A;  1VVD A;  1G4G A;  1Z92 B;  3M7P A;  1TPG A;  3O8E B; 
#chains in the Genus database with same CATH topology
 4ONT D;  5HYU B;  1C1Z A;  2JGW A;  3ZD1 A;  2EHF A;  4JHS A;  2IZ3 A;  4KKD A;  2EC3 A;  2RKY A;  2Y8R A;  2B5I D;  3GOV A;  3K3T A;  4APL A;  3ERB A;  2W81 A;  3IU3 I;  5HZP B;  4PO7 A;  5DN5 A;  3RJ3 D;  3KZJ A;  4K12 A;  2Y8T A;  4J38 B;  2YRA A;  2LOJ A;  4CSY A;  2ZYC A;  3IX0 A;  3INB C;  4AYD A;  5JPM G;  4AYI A;  2RLP A;  2IZ4 A;  4MSL A;  1LY2 A;  4B2S A;  1H03 P;  1OK2 A;  5HYP A;  1H04 P;  1VVC A;  3OP8 A;  1Q3X A;  1SRZ A;  3FGR A;  1RLH A;  3NJA A;  1OJW A;  1NWV A;  5I0Q B;  3ZD2 A;  1E8B A;  2WII C;  1QO6 A;  4WJG 2;  1HCC A;  4ZH1 D;  2UWN A;  3CAL A;  4LOT A;  2KMS A;  1FBR A;  4B2R A;  2CG6 A;  3VWO A;  2CG7 A;  2YBY A;  2X2Z A;  1MD7 A;  3MQL A;  2MCZ A;  1E5G A;  2XWB F;  3OED C;  3ZLD A;  1CKL A;  1QGB A;  2XRD A;  2XQW C;  5FO8 C;  3T5O A;  3R62 A;  2JRA A;  1GKG A;  2I2L A;  1G4F A;  3F6K A;  4MUC A;  1GHQ B;  2CKU A;  3WSX A;  2V8E A;  1TPM A;  2O39 C;  1HFI A;  1TPN A;  4YNX A;  4PZ5 A;  4A5W B;  1GKN A;  4AYE A;  3NFP I;  3WSY A;  2KRI A;  2RKZ A;  1UOT P;  3ZRZ A;  1OK3 A;  2XWJ I;  1HFH A;  2ERJ A;  1O9A A;  4N7E A;  1SS2 A;  3ZLE A;  1QUB A;  4IGD A;  4BWC A;  1H2P P;  1E88 A;  2RL0 A;  4DJZ A;  3CI0 J;  3FGT A;  1OK1 A;  3L89 M;  4FXG G;  1OJY A;  3SW0 X;  4C16 A;  1U5M A;  2A55 A;  1OJV A;  2Y8S A;  1ZJK A;  2XRB A;  1OK9 A;  1GPZ A;  4YIZ A;  1ELV A;  5DN4 A;  1PPQ A;  2QY0 A;  3GXE A;  4LOS A;  2BZM A;  3TVJ A;  3EJH A;  4AYM A;  4F4O C;  3OXU D;  5HYT B;  1H2Q P;  1MD8 A;  2G7I A;  3KXV A;  2W80 A;  2JGX A;  2RLQ A;  2MCY A;  1VVD A;  1G4G A;  1Z92 B;  3M7P A;  1TPG A;  3O8E B; 
#chains in the Genus database with same CATH homology
 4ONT D;  5HYU B;  1C1Z A;  2JGW A;  3ZD1 A;  2EHF A;  4JHS A;  2IZ3 A;  4KKD A;  2EC3 A;  2RKY A;  2B5I D;  3GOV A;  3ERB A;  2W81 A;  3IU3 I;  5HZP B;  3RJ3 D;  3KZJ A;  4K12 A;  4J38 B;  2YRA A;  2LOJ A;  4CSY A;  3IX0 A;  3INB C;  4AYD A;  5JPM G;  4AYI A;  2RLP A;  2IZ4 A;  1LY2 A;  4B2S A;  1H03 P;  1OK2 A;  5HYP A;  1H04 P;  1VVC A;  3OP8 A;  1Q3X A;  1SRZ A;  1OJW A;  1NWV A;  5I0Q B;  3ZD2 A;  1E8B A;  2WII C;  1QO6 A;  4WJG 2;  1HCC A;  4ZH1 D;  2UWN A;  3CAL A;  4LOT A;  2KMS A;  1FBR A;  4B2R A;  2CG6 A;  2CG7 A;  2YBY A;  1MD7 A;  3MQL A;  2MCZ A;  1E5G A;  2XWB F;  3OED C;  1CKL A;  1QGB A;  2XRD A;  2XQW C;  5FO8 C;  3T5O A;  3R62 A;  2JRA A;  1GKG A;  1G4F A;  4MUC A;  1GHQ B;  2CKU A;  2V8E A;  1TPM A;  2O39 C;  1HFI A;  1TPN A;  4YNX A;  4PZ5 A;  4A5W B;  1GKN A;  4AYE A;  3NFP I;  2KRI A;  2RKZ A;  1UOT P;  3ZRZ A;  1OK3 A;  2XWJ I;  1HFH A;  2ERJ A;  1O9A A;  1SS2 A;  1QUB A;  4IGD A;  1H2P P;  1E88 A;  2RL0 A;  4DJZ A;  1OK1 A;  3L89 M;  4FXG G;  1OJY A;  3SW0 X;  4C16 A;  1U5M A;  2A55 A;  1OJV A;  1ZJK A;  2XRB A;  1OK9 A;  1GPZ A;  1ELV A;  1PPQ A;  2QY0 A;  3GXE A;  4LOS A;  2BZM A;  3TVJ A;  3EJH A;  4AYM A;  4F4O C;  3OXU D;  5HYT B;  1H2Q P;  1MD8 A;  2G7I A;  3KXV A;  2W80 A;  2JGX A;  2RLQ A;  2MCY A;  1VVD A;  1G4G A;  1Z92 B;  3M7P A;  1TPG A;  3O8E B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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