4J38B

Structure of borrelia burgdorferi outer surface protein e in complex with factor h domains 19-20
Total Genus 21
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
21
sequence length
123
structure length
123
Chain Sequence
TGKCGPPPPIDNGGITSFPLSVYAPASSVEYQCANLYQLEGNKRITCRNGQWSEPPKCLHPCVISREIMENYNIALRWTAKQKLYSRTGESVEFVCKRGYRLSSRSHTLRTTCWDGKLEYPTC
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Outer surface protein E
publication title Structural Basis for Complement Evasion by Lyme Disease Pathogen Borrelia burgdorferi
pubmed doi rcsb
source organism Borrelia burgdorferi
molecule tags Immune system
total genus 21
structure length 123
sequence length 123
ec nomenclature
pdb deposition date 2013-02-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF00084 Sushi Sushi repeat (SCR repeat)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.70.10 Mainly Beta Ribbon Complement Module; domain 1 Complement Module, domain 1 4j38B01
2.10.70.10 Mainly Beta Ribbon Complement Module; domain 1 Complement Module, domain 1 4j38B02
3OEDC 1H2QP 1GPZA 1QO6A 1UOTP 3T5OA 2O39C 5JPMG 1OK3A 4AYEA 1HFHA 1GKNA 3O8EB 2YBYA 2KRIA 4PZ5A 1PPQA 1H04P 4JHSA 1O9AA 4KKDA 1NWVA 4IGDA 2EHFA 2LOJA 1OJWA 1MD7A 1VVDA 1FBRA 1LY2A 2ERJA 1OK9A 3OP8A 3IX0A 2V8EA 4C16A 2BZMA 3L89M 2XQWC 2YRAA 3TVJA 1E8BA 3KZJA 4WJG2 4LOTA 3RJ3D 1ZJKA 2CG7A 1Z92B 4B2RA 1MD8A 1TPNA 2RL0A 4ZH1D 3M7PA 4AYMA 2EC3A 1GHQB 4DJZA 5FO8C 2A55A 1H2PP 2RKYA 4F4OC 3ZRZA 1U5MA 2XRBA 1HFIA 2CKUA 5HYUB 1HCCA 3IU3I 2MCYA 2UWNA 2JRAA 1SRZA 2JGWA 5HYPA 5HYTB 2W80A 2MCZA 1GKGA 4AYIA 1QGBA 3ZD1A 2XRDA 3GXEA 1OJYA 1VVCA 1G4GA 2XWJI 4FXGG 2RLQA 3R62A 5I0QB 4A5WB 2IZ3A 1TPMA 2KMSA 1OK1A 2IZ4A 4J38B 1Q3XA 4YNXA 3KXVA 2G7IA 3OXUD 3ERBA 3NFPI 2QY0A 1H03P 1C1ZA 4CSYA 1E5GA 1G4FA 2RLPA 1OJVA 2B5ID 4B2SA 1SS2A 1OK2A 4AYDA 1CKLA 3SW0X 2WIIC 5HZPB 1QUBA 3INBC 1E88A 4K12A 4LOSA 2CG6A 2RKZA 2XWBF 3ZD2A 3CALA 1ELVA 2W81A 4ONTD 3GOVA 2JGXA 4MUCA 1TPGA 3MQLA 3EJHA
chains in the Genus database with same CATH superfamily
3OEDC 1H2QP 1GPZA 1QO6A 1UOTP 3T5OA 2O39C 5JPMG 1OK3A 4AYEA 1HFHA 1GKNA 3O8EB 2YBYA 2KRIA 4PZ5A 1PPQA 1H04P 4JHSA 1O9AA 1RLHA 4YIZA 4N7EA 3VWOA 4KKDA 1NWVA 4IGDA 2EHFA 2LOJA 2Y8SA 1OJWA 1MD7A 1VVDA 1FBRA 1LY2A 2X2ZA 2ERJA 1OK9A 3OP8A 3IX0A 2V8EA 4PO7A 4C16A 3NJAA 2BZMA 3L89M 2XQWC 2YRAA 3TVJA 1E8BA 3FGTA 3KZJA 4WJG2 4LOTA 3RJ3D 1ZJKA 2CG7A 1Z92B 4B2RA 1MD8A 1TPNA 2RL0A 4ZH1D 3M7PA 5DN4A 4AYMA 3K3TA 2EC3A 1GHQB 4DJZA 5FO8C 2A55A 1H2PP 2RKYA 4F4OC 2ZYCA 3ZRZA 1U5MA 2XRBA 3ZLDA 1HFIA 2CKUA 5HYUB 1HCCA 2Y8RA 3IU3I 2MCYA 2UWNA 2JRAA 1SRZA 2JGWA 5HYPA 5HYTB 2W80A 3WSXA 2MCZA 1GKGA 4AYIA 1QGBA 3ZD1A 2XRDA 3GXEA 1OJYA 1VVCA 1G4GA 2XWJI 3CI0J 4FXGG 2RLQA 3R62A 5I0QB 2Y8TA 4A5WB 2IZ3A 1TPMA 3ZLEA 2KMSA 1OK1A 2IZ4A 4J38B 1Q3XA 4YNXA 3KXVA 3WSYA 2G7IA 3F6KA 4BWCA 3OXUD 3ERBA 3NFPI 2QY0A 1H03P 1C1ZA 4CSYA 1E5GA 1G4FA 2RLPA 1OJVA 2B5ID 3FGRA 4B2SA 1SS2A 1OK2A 4AYDA 1CKLA 2I2LA 3SW0X 2WIIC 5HZPB 1QUBA 3INBC 1E88A 4K12A 4LOSA 2CG6A 2RKZA 2XWBF 3ZD2A 3CALA 1ELVA 2W81A 4ONTD 3GOVA 2JGXA 4MUCA 4MSLA 1TPGA 3MQLA 5DN5A 3EJHA 4APLA
chains in the Genus database with same CATH topology
3OEDC 1H2QP 1GPZA 1QO6A 1UOTP 3T5OA 2O39C 5JPMG 1OK3A 4AYEA 1HFHA 1GKNA 3O8EB 2YBYA 2KRIA 4PZ5A 1PPQA 1H04P 4JHSA 1O9AA 4KKDA 1NWVA 4IGDA 2EHFA 2LOJA 1OJWA 1MD7A 1VVDA 1FBRA 1LY2A 2ERJA 1OK9A 3OP8A 3IX0A 2V8EA 4C16A 2BZMA 3L89M 2XQWC 2YRAA 3TVJA 1E8BA 3KZJA 4WJG2 4LOTA 3RJ3D 1ZJKA 2CG7A 1Z92B 4B2RA 1MD8A 1TPNA 2RL0A 4ZH1D 3M7PA 4AYMA 2EC3A 1GHQB 4DJZA 5FO8C 2A55A 1H2PP 2RKYA 4F4OC 3ZRZA 1U5MA 2XRBA 1HFIA 2CKUA 5HYUB 1HCCA 3IU3I 2MCYA 2UWNA 2JRAA 1SRZA 2JGWA 5HYPA 5HYTB 2W80A 2MCZA 1GKGA 4AYIA 1QGBA 3ZD1A 2XRDA 3GXEA 1OJYA 1VVCA 1G4GA 2XWJI 4FXGG 2RLQA 3R62A 5I0QB 4A5WB 2IZ3A 1TPMA 2KMSA 1OK1A 2IZ4A 4J38B 1Q3XA 4YNXA 3KXVA 2G7IA 3OXUD 3ERBA 3NFPI 2QY0A 1H03P 1C1ZA 4CSYA 1E5GA 1G4FA 2RLPA 1OJVA 2B5ID 4B2SA 1SS2A 1OK2A 4AYDA 1CKLA 3SW0X 2WIIC 5HZPB 1QUBA 3INBC 1E88A 4K12A 4LOSA 2CG6A 2RKZA 2XWBF 3ZD2A 3CALA 1ELVA 2W81A 4ONTD 3GOVA 2JGXA 4MUCA 1TPGA 3MQLA 3EJHA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3OED C;  1H2Q P;  1GPZ A;  1QO6 A;  1UOT P;  3T5O A;  2O39 C;  5JPM G;  1OK3 A;  4AYE A;  1HFH A;  1GKN A;  3O8E B;  2YBY A;  2KRI A;  4PZ5 A;  1PPQ A;  1H04 P;  4JHS A;  1O9A A;  4KKD A;  1NWV A;  4IGD A;  2EHF A;  2LOJ A;  1OJW A;  1MD7 A;  1VVD A;  1FBR A;  1LY2 A;  2ERJ A;  1OK9 A;  3OP8 A;  3IX0 A;  2V8E A;  4C16 A;  2BZM A;  3L89 M;  2XQW C;  2YRA A;  3TVJ A;  1E8B A;  3KZJ A;  4WJG 2;  4LOT A;  3RJ3 D;  1ZJK A;  2CG7 A;  1Z92 B;  4B2R A;  1MD8 A;  1TPN A;  2RL0 A;  4ZH1 D;  3M7P A;  4AYM A;  2EC3 A;  1GHQ B;  4DJZ A;  5FO8 C;  2A55 A;  1H2P P;  2RKY A;  4F4O C;  3ZRZ A;  1U5M A;  2XRB A;  1HFI A;  2CKU A;  5HYU B;  1HCC A;  3IU3 I;  2MCY A;  2UWN A;  2JRA A;  1SRZ A;  2JGW A;  5HYP A;  5HYT B;  2W80 A;  2MCZ A;  1GKG A;  4AYI A;  1QGB A;  3ZD1 A;  2XRD A;  3GXE A;  1OJY A;  1VVC A;  1G4G A;  2XWJ I;  4FXG G;  2RLQ A;  3R62 A;  5I0Q B;  4A5W B;  2IZ3 A;  1TPM A;  2KMS A;  1OK1 A;  2IZ4 A;  4J38 B;  1Q3X A;  4YNX A;  3KXV A;  2G7I A;  3OXU D;  3ERB A;  3NFP I;  2QY0 A;  1H03 P;  1C1Z A;  4CSY A;  1E5G A;  1G4F A;  2RLP A;  1OJV A;  2B5I D;  4B2S A;  1SS2 A;  1OK2 A;  4AYD A;  1CKL A;  3SW0 X;  2WII C;  5HZP B;  1QUB A;  3INB C;  1E88 A;  4K12 A;  4LOS A;  2CG6 A;  2RKZ A;  2XWB F;  3ZD2 A;  3CAL A;  1ELV A;  2W81 A;  4ONT D;  3GOV A;  2JGX A;  4MUC A;  1TPG A;  3MQL A;  3EJH A; 
#chains in the Genus database with same CATH topology
 3OED C;  1H2Q P;  1GPZ A;  1QO6 A;  1UOT P;  3T5O A;  2O39 C;  5JPM G;  1OK3 A;  4AYE A;  1HFH A;  1GKN A;  3O8E B;  2YBY A;  2KRI A;  4PZ5 A;  1PPQ A;  1H04 P;  4JHS A;  1O9A A;  1RLH A;  4YIZ A;  4N7E A;  3VWO A;  4KKD A;  1NWV A;  4IGD A;  2EHF A;  2LOJ A;  2Y8S A;  1OJW A;  1MD7 A;  1VVD A;  1FBR A;  1LY2 A;  2X2Z A;  2ERJ A;  1OK9 A;  3OP8 A;  3IX0 A;  2V8E A;  4PO7 A;  4C16 A;  3NJA A;  2BZM A;  3L89 M;  2XQW C;  2YRA A;  3TVJ A;  1E8B A;  3FGT A;  3KZJ A;  4WJG 2;  4LOT A;  3RJ3 D;  1ZJK A;  2CG7 A;  1Z92 B;  4B2R A;  1MD8 A;  1TPN A;  2RL0 A;  4ZH1 D;  3M7P A;  5DN4 A;  4AYM A;  3K3T A;  2EC3 A;  1GHQ B;  4DJZ A;  5FO8 C;  2A55 A;  1H2P P;  2RKY A;  4F4O C;  2ZYC A;  3ZRZ A;  1U5M A;  2XRB A;  3ZLD A;  1HFI A;  2CKU A;  5HYU B;  1HCC A;  2Y8R A;  3IU3 I;  2MCY A;  2UWN A;  2JRA A;  1SRZ A;  2JGW A;  5HYP A;  5HYT B;  2W80 A;  3WSX A;  2MCZ A;  1GKG A;  4AYI A;  1QGB A;  3ZD1 A;  2XRD A;  3GXE A;  1OJY A;  1VVC A;  1G4G A;  2XWJ I;  3CI0 J;  4FXG G;  2RLQ A;  3R62 A;  5I0Q B;  2Y8T A;  4A5W B;  2IZ3 A;  1TPM A;  3ZLE A;  2KMS A;  1OK1 A;  2IZ4 A;  4J38 B;  1Q3X A;  4YNX A;  3KXV A;  3WSY A;  2G7I A;  3F6K A;  4BWC A;  3OXU D;  3ERB A;  3NFP I;  2QY0 A;  1H03 P;  1C1Z A;  4CSY A;  1E5G A;  1G4F A;  2RLP A;  1OJV A;  2B5I D;  3FGR A;  4B2S A;  1SS2 A;  1OK2 A;  4AYD A;  1CKL A;  2I2L A;  3SW0 X;  2WII C;  5HZP B;  1QUB A;  3INB C;  1E88 A;  4K12 A;  4LOS A;  2CG6 A;  2RKZ A;  2XWB F;  3ZD2 A;  3CAL A;  1ELV A;  2W81 A;  4ONT D;  3GOV A;  2JGX A;  4MUC A;  4MSL A;  1TPG A;  3MQL A;  5DN5 A;  3EJH A;  4APL A; 
#chains in the Genus database with same CATH homology
 3OED C;  1H2Q P;  1GPZ A;  1QO6 A;  1UOT P;  3T5O A;  2O39 C;  5JPM G;  1OK3 A;  4AYE A;  1HFH A;  1GKN A;  3O8E B;  2YBY A;  2KRI A;  4PZ5 A;  1PPQ A;  1H04 P;  4JHS A;  1O9A A;  4KKD A;  1NWV A;  4IGD A;  2EHF A;  2LOJ A;  1OJW A;  1MD7 A;  1VVD A;  1FBR A;  1LY2 A;  2ERJ A;  1OK9 A;  3OP8 A;  3IX0 A;  2V8E A;  4C16 A;  2BZM A;  3L89 M;  2XQW C;  2YRA A;  3TVJ A;  1E8B A;  3KZJ A;  4WJG 2;  4LOT A;  3RJ3 D;  1ZJK A;  2CG7 A;  1Z92 B;  4B2R A;  1MD8 A;  1TPN A;  2RL0 A;  4ZH1 D;  3M7P A;  4AYM A;  2EC3 A;  1GHQ B;  4DJZ A;  5FO8 C;  2A55 A;  1H2P P;  2RKY A;  4F4O C;  3ZRZ A;  1U5M A;  2XRB A;  1HFI A;  2CKU A;  5HYU B;  1HCC A;  3IU3 I;  2MCY A;  2UWN A;  2JRA A;  1SRZ A;  2JGW A;  5HYP A;  5HYT B;  2W80 A;  2MCZ A;  1GKG A;  4AYI A;  1QGB A;  3ZD1 A;  2XRD A;  3GXE A;  1OJY A;  1VVC A;  1G4G A;  2XWJ I;  4FXG G;  2RLQ A;  3R62 A;  5I0Q B;  4A5W B;  2IZ3 A;  1TPM A;  2KMS A;  1OK1 A;  2IZ4 A;  4J38 B;  1Q3X A;  4YNX A;  3KXV A;  2G7I A;  3OXU D;  3ERB A;  3NFP I;  2QY0 A;  1H03 P;  1C1Z A;  4CSY A;  1E5G A;  1G4F A;  2RLP A;  1OJV A;  2B5I D;  4B2S A;  1SS2 A;  1OK2 A;  4AYD A;  1CKL A;  3SW0 X;  2WII C;  5HZP B;  1QUB A;  3INB C;  1E88 A;  4K12 A;  4LOS A;  2CG6 A;  2RKZ A;  2XWB F;  3ZD2 A;  3CAL A;  1ELV A;  2W81 A;  4ONT D;  3GOV A;  2JGX A;  4MUC A;  1TPG A;  3MQL A;  3EJH A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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