4J5RA

Targ1 (c6orf130), terminal adp-ribose glycohydrolase 1 bound to adp-hpd
Total Genus 48
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
48
sequence length
141
structure length
141
Chain Sequence
SRITYVKGDLFACPKTDSLAHCISEDCRMGAGIAVLFKKKFGGVQELLNQQKKSGEVAVLKRDGRYIYYLITKKRASHKPTYENLQKSLEAMKSHCLKNGVTDLSMPRIGCGLDRLQWENVSAMIEEVFEATDIKITVYTL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords O-acetyl-ADP-ribose deacetylase 1
publication title Deficiency of terminal ADP-ribose protein glycohydrolase TARG1/C6orf130 in neurodegenerative disease.
pubmed doi rcsb
source organism Homo sapiens
total genus 48
structure length 141
sequence length 141
chains with identical sequence B
ec nomenclature ec 3.5.1.-:
pdb deposition date 2013-02-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01661 Macro Macro domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.220.10 Alpha Beta 3-Layer(aba) Sandwich Leucine Aminopeptidase, subunit E; domain 1 Leucine Aminopeptidase, subunit E, domain 1 4j5rA00
3KR4A 4R76A 4X2TA 4J5QA 4GVVA 1HJZA 3EJFA 3GPGA 4GVWA 3H8EA 5CBMA 5CB5A 4ZY0A 3KQXA 4ETJA 4ZX8A 2AFCA 2FAVA 3SIGA 3V2BA 3IIDA 3T8WA 4ZY2A 5DUSA 3GPOA 1ZR5A 4R6TA 1SPVA 2BFQA 3ETIA 2DX6A 2EWBA 3EWQA 1NJRA 2EEEA 3H8GA 3EWRA 3KZWA 4JLLA 3IJ3A 4ZYQA 4ABKA 4JCAA 3JRUA 3KR5A 1VHUA 5E3BA 2X47A 4R7MA 4IQYA 5HOLA 5FSVA 1LAMA 4KYBA 4ETKA 4ZI6A 1TXZA 5HIHA 3SIJA 1BLLE 4J5RA 5CMSA 5FSXA 3EWPA 3Q6ZA 3EWOA 3SIHA 3IIFA 3SIIA 1LAPA 4JGKA 3GPQA 3EW5A 1LCPA 3GQEA 3VFQA 2VRIA 3KQZA 2XD7A 4TU0A 4ESSA 5FSUA 3EJGA 4ZX9A 4ABLA 3V45A 4K3NA 3PEIA 5FSYA 4JVVA 3GQOA 3H8FA 4K0CA 2J9AA 3Q71A 3EKEA 4GUAA 5FSZA 1BPNA 4D86A 4ZY1A 2LGRA 1BPMA 1TY8A 5D8NA 1GYTA 5CB3A 2FXKA 2L8RA 4J5SA 3JZTA 1YD9A 4J4ZA 2FG1A 2BFRA 1LANA 1ZR3A 4UMLA 4KSIA 2ACFA 5AILA
chains in the Genus database with same CATH superfamily
2JZEA 3KR4A 4R76A 4X2TA 4J5QA 4GVVA 1HJZA 3EJFA 3GPGA 4GVWA 3H8EA 5CBMA 5CB5A 4ZY0A 3KQXA 4ETJA 4ZX8A 2AFCA 2FAVA 2KQVA 3SIGA 3V2BA 3IIDA 3T8WA 4ZY2A 5DUSA 3GPOA 2WCTA 1ZR5A 4R6TA 1SPVA 2BFQA 3ETIA 2DX6A 2W2GA 2EWBA 3EWQA 1NJRA 2EEEA 3H8GA 3EWRA 3KZWA 4JLLA 3IJ3A 4ZYQA 4ABKA 4JCAA 3JRUA 3KR5A 1VHUA 5E3BA 2X47A 4R7MA 4IQYA 5HOLA 5FSVA 1LAMA 4KYBA 4ETKA 4ZI6A 1TXZA 5HIHA 3SIJA 1BLLE 4J5RA 5CMSA 5FSXA 2RNKA 3EWPA 3Q6ZA 3EWOA 3SIHA 3IIFA 3SIIA 1LAPA 4JGKA 3GPQA 3EW5A 1LCPA 3GQEA 3VFQA 2JZDA 2VRIA 3KQZA 2XD7A 4TU0A 4ESSA 5FSUA 3EJGA 4ZX9A 4ABLA 3V45A 4K3NA 3PEIA 5FSYA 4JVVA 3GQOA 3H8FA 4K0CA 2J9AA 3Q71A 3EKEA 4GUAA 5FSZA 1BPNA 4D86A 4ZY1A 2LGRA 1BPMA 1TY8A 5D8NA 1GYTA 5CB3A 2FXKA 2L8RA 4J5SA 3JZTA 1YD9A 4J4ZA 2FG1A 2BFRA 1LANA 1ZR3A 4UMLA 4KSIA 2ACFA 2JZFA 5AILA
chains in the Genus database with same CATH topology
3KR4A 4R76A 4X2TA 4J5QA 4GVVA 1HJZA 3EJFA 3GPGA 4GVWA 3H8EA 5CBMA 5CB5A 4ZY0A 3KQXA 4ETJA 4ZX8A 2AFCA 2FAVA 3SIGA 3V2BA 3IIDA 3T8WA 4ZY2A 5DUSA 3GPOA 1ZR5A 4R6TA 1SPVA 2BFQA 3ETIA 2DX6A 2EWBA 3EWQA 1NJRA 2EEEA 3H8GA 3EWRA 3KZWA 4JLLA 3IJ3A 4ZYQA 4ABKA 4JCAA 3JRUA 3KR5A 1VHUA 5E3BA 2X47A 4R7MA 4IQYA 5HOLA 5FSVA 1LAMA 4KYBA 4ETKA 4ZI6A 1TXZA 5HIHA 3SIJA 1BLLE 4J5RA 5CMSA 5FSXA 3EWPA 3Q6ZA 3EWOA 3SIHA 3IIFA 3SIIA 1LAPA 4JGKA 3GPQA 3EW5A 1LCPA 3GQEA 3VFQA 2VRIA 3KQZA 2XD7A 4TU0A 4ESSA 5FSUA 3EJGA 4ZX9A 4ABLA 3V45A 4K3NA 3PEIA 5FSYA 4JVVA 3GQOA 3H8FA 4K0CA 2J9AA 3Q71A 3EKEA 4GUAA 5FSZA 1BPNA 4D86A 4ZY1A 2LGRA 1BPMA 1TY8A 5D8NA 1GYTA 5CB3A 2FXKA 2L8RA 4J5SA 3JZTA 1YD9A 4J4ZA 2FG1A 2BFRA 1LANA 1ZR3A 4UMLA 4KSIA 2ACFA 5AILA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3KR4 A;  4R76 A;  4X2T A;  4J5Q A;  4GVV A;  1HJZ A;  3EJF A;  3GPG A;  4GVW A;  3H8E A;  5CBM A;  5CB5 A;  4ZY0 A;  3KQX A;  4ETJ A;  4ZX8 A;  2AFC A;  2FAV A;  3SIG A;  3V2B A;  3IID A;  3T8W A;  4ZY2 A;  5DUS A;  3GPO A;  1ZR5 A;  4R6T A;  1SPV A;  2BFQ A;  3ETI A;  2DX6 A;  2EWB A;  3EWQ A;  1NJR A;  2EEE A;  3H8G A;  3EWR A;  3KZW A;  4JLL A;  3IJ3 A;  4ZYQ A;  4ABK A;  4JCA A;  3JRU A;  3KR5 A;  1VHU A;  5E3B A;  2X47 A;  4R7M A;  4IQY A;  5HOL A;  5FSV A;  1LAM A;  4KYB A;  4ETK A;  4ZI6 A;  1TXZ A;  5HIH A;  3SIJ A;  1BLL E;  4J5R A;  5CMS A;  5FSX A;  3EWP A;  3Q6Z A;  3EWO A;  3SIH A;  3IIF A;  3SII A;  1LAP A;  4JGK A;  3GPQ A;  3EW5 A;  1LCP A;  3GQE A;  3VFQ A;  2VRI A;  3KQZ A;  2XD7 A;  4TU0 A;  4ESS A;  5FSU A;  3EJG A;  4ZX9 A;  4ABL A;  3V45 A;  4K3N A;  3PEI A;  5FSY A;  4JVV A;  3GQO A;  3H8F A;  4K0C A;  2J9A A;  3Q71 A;  3EKE A;  4GUA A;  5FSZ A;  1BPN A;  4D86 A;  4ZY1 A;  2LGR A;  1BPM A;  1TY8 A;  5D8N A;  1GYT A;  5CB3 A;  2FXK A;  2L8R A;  4J5S A;  3JZT A;  1YD9 A;  4J4Z A;  2FG1 A;  2BFR A;  1LAN A;  1ZR3 A;  4UML A;  4KSI A;  2ACF A;  5AIL A; 
#chains in the Genus database with same CATH topology
 2JZE A;  3KR4 A;  4R76 A;  4X2T A;  4J5Q A;  4GVV A;  1HJZ A;  3EJF A;  3GPG A;  4GVW A;  3H8E A;  5CBM A;  5CB5 A;  4ZY0 A;  3KQX A;  4ETJ A;  4ZX8 A;  2AFC A;  2FAV A;  2KQV A;  3SIG A;  3V2B A;  3IID A;  3T8W A;  4ZY2 A;  5DUS A;  3GPO A;  2WCT A;  1ZR5 A;  4R6T A;  1SPV A;  2BFQ A;  3ETI A;  2DX6 A;  2W2G A;  2EWB A;  3EWQ A;  1NJR A;  2EEE A;  3H8G A;  3EWR A;  3KZW A;  4JLL A;  3IJ3 A;  4ZYQ A;  4ABK A;  4JCA A;  3JRU A;  3KR5 A;  1VHU A;  5E3B A;  2X47 A;  4R7M A;  4IQY A;  5HOL A;  5FSV A;  1LAM A;  4KYB A;  4ETK A;  4ZI6 A;  1TXZ A;  5HIH A;  3SIJ A;  1BLL E;  4J5R A;  5CMS A;  5FSX A;  2RNK A;  3EWP A;  3Q6Z A;  3EWO A;  3SIH A;  3IIF A;  3SII A;  1LAP A;  4JGK A;  3GPQ A;  3EW5 A;  1LCP A;  3GQE A;  3VFQ A;  2JZD A;  2VRI A;  3KQZ A;  2XD7 A;  4TU0 A;  4ESS A;  5FSU A;  3EJG A;  4ZX9 A;  4ABL A;  3V45 A;  4K3N A;  3PEI A;  5FSY A;  4JVV A;  3GQO A;  3H8F A;  4K0C A;  2J9A A;  3Q71 A;  3EKE A;  4GUA A;  5FSZ A;  1BPN A;  4D86 A;  4ZY1 A;  2LGR A;  1BPM A;  1TY8 A;  5D8N A;  1GYT A;  5CB3 A;  2FXK A;  2L8R A;  4J5S A;  3JZT A;  1YD9 A;  4J4Z A;  2FG1 A;  2BFR A;  1LAN A;  1ZR3 A;  4UML A;  4KSI A;  2ACF A;  2JZF A;  5AIL A; 
#chains in the Genus database with same CATH homology
 3KR4 A;  4R76 A;  4X2T A;  4J5Q A;  4GVV A;  1HJZ A;  3EJF A;  3GPG A;  4GVW A;  3H8E A;  5CBM A;  5CB5 A;  4ZY0 A;  3KQX A;  4ETJ A;  4ZX8 A;  2AFC A;  2FAV A;  3SIG A;  3V2B A;  3IID A;  3T8W A;  4ZY2 A;  5DUS A;  3GPO A;  1ZR5 A;  4R6T A;  1SPV A;  2BFQ A;  3ETI A;  2DX6 A;  2EWB A;  3EWQ A;  1NJR A;  2EEE A;  3H8G A;  3EWR A;  3KZW A;  4JLL A;  3IJ3 A;  4ZYQ A;  4ABK A;  4JCA A;  3JRU A;  3KR5 A;  1VHU A;  5E3B A;  2X47 A;  4R7M A;  4IQY A;  5HOL A;  5FSV A;  1LAM A;  4KYB A;  4ETK A;  4ZI6 A;  1TXZ A;  5HIH A;  3SIJ A;  1BLL E;  4J5R A;  5CMS A;  5FSX A;  3EWP A;  3Q6Z A;  3EWO A;  3SIH A;  3IIF A;  3SII A;  1LAP A;  4JGK A;  3GPQ A;  3EW5 A;  1LCP A;  3GQE A;  3VFQ A;  2VRI A;  3KQZ A;  2XD7 A;  4TU0 A;  4ESS A;  5FSU A;  3EJG A;  4ZX9 A;  4ABL A;  3V45 A;  4K3N A;  3PEI A;  5FSY A;  4JVV A;  3GQO A;  3H8F A;  4K0C A;  2J9A A;  3Q71 A;  3EKE A;  4GUA A;  5FSZ A;  1BPN A;  4D86 A;  4ZY1 A;  2LGR A;  1BPM A;  1TY8 A;  5D8N A;  1GYT A;  5CB3 A;  2FXK A;  2L8R A;  4J5S A;  3JZT A;  1YD9 A;  4J4Z A;  2FG1 A;  2BFR A;  1LAN A;  1ZR3 A;  4UML A;  4KSI A;  2ACF A;  5AIL A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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