4JWEA

Crystal structure of the substrate binding domain of e.coli dnak in complex with sheep bac7(1-21)
Total Genus 62
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
62
sequence length
213
structure length
213
Chain Sequence
VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEI
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Chaperone/antibiotic
source organism Escherichia coli
publication title Structural Identification of DnaK Binding Sites within Bovine and Sheep Bactenecin Bac7.
pubmed rcsb
molecule keywords Chaperone protein DnaK
total genus 62
structure length 213
sequence length 213
chains with identical sequence B
ec nomenclature
pdb deposition date 2013-03-27
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1270.10 Mainly Alpha Up-down Bundle Substrate Binding Domain Of Dnak; Chain:A; Domain 2 Substrate Binding Domain Of Dnak; Chain:A; Domain 2 4jweA02
2.60.34.10 Mainly Beta Sandwich Substrate Binding Domain Of DNAk; Chain A, domain 1 Substrate Binding Domain Of DNAk; Chain A, domain 1 4jweA01
2V7YA 4HYBA 3C7NA 2BPRA 3L3OM 2WINM 4JWCA 4EZVA 4F01A 5TKYA 3T48A 1YUWA 4B9QA 1DKZA 3DOBA 3DPOA 4FL9A 3DQGA 3T46A 4R5KA 4EZQA 3T4AG 4H6IA 4R5GA 4H6HA 3D2FA 4JNFA 2OP6A 4EZXA 4EZSA 4JWIA 3T47A 3C7NB 3QNJA 4JN4A 7HSCA 4JWDA 4E81A 4EZZA 4PO2A 4JWEA 4R5IA 4WV7A 2QXLA 1Q5LA 1U00A 3N8EA 4R5LA 4EZPA 1DKYA 2QFFA 3T49A 4R5JA 5E84A 4EZTA 4EZUA 3OHXM 4WV5A 1BPRA 2KHOA 4EZYA 4EZOA 4HY9A 4F00A 4JNEA 1CKRA 4EZWA 3DPPA 4EZRA 3H0XA 1DG4A 4EZNA 3D2EA 3DPQA 1DKXA
chains in the Genus database with same CATH superfamily
2F1BA 4AZ6A 4IWQA 1YUWA 1ZWWA 2Q13A 2EWFA 4FM3A 2OP6A 4EZSA 1YWMA 4UDXX 4PO2A 3BUDA 3CAZA 2X3VA 1X04A 3CKDA 4M0MA 2NCZA 3DDFA 3EJSA 2ND0A 4UDYX 4BNEA 4FL9A 2YIVX 4JNFA 4ILHB 1GN9A 2X3WA 3SBTB 2EFLA 2F18A 3CVRA 2C08A 1CKRA 4F00A 3DPPA 1OA0A 2ELBA 3DX2A 4AZGA 3CZSA 2JNKA 3RPMA 3I04A 1SU6A 4NQIA 4EZVA 3T48A 3ER8C 3QWEA 3T46A 2YLLA 3ACOA 3DX3A 5KBPA 2YL6A 3C7NB 1GNLA 3D50A 1UPXA 2Z0NA 3D4YA 3DX0A 3BVXA 2Q12A 3BVUA 5TKYA 4MQDA 4AZHA 4WPCA 4AZ5A 3B53X 3D51A 4E81A 2LM0A 3EJRA 3BUIA 4EZPA 2MI7A 4EZUA 2PMRA 5E84A 3T49A 1PS3A 2V0OA 3CV5A 4KIKA 3ZEDA 3D2EA 2O0I1 2V7YA 2LXYA 1I4LA 1OAOA 4I43A 1SU7A 1TQWA 2FICA 2OW6A 3G9GA 3Q0KA 3EJTA 3OK8A 4HY9A 4JNEA 4FZOA 5FIGA 4I1QA 5FLEX 4JLCA 3DPOA 3T4AG 3BUQA 3ZEFA 2RAKA 3EJPA 3N8EA 1GNTA 3QE6A 3QA8A 1OA1A 4AKVA 4E3CA 4EZOA 2RT6A 4EZWA 4EZRA 2YIBA 1DG4A 1E9VA 3DPQA 2FYVA 3LVTA 1HWWA 2OZNB 3FD9A 1DKZA 3DX4A 3ER9B 4IWOA 7HSCA 2YL8A 1TQVA 4WV5A 3OHXM 2EX3B 2ALWA 1SU8A 2JNSA 1HXKA 1QWNA 3EJQA 2GAFD 2ZXQA 4JL9A 2GF4A 1JQKA 3C7NA 3HAIA 2WINM 2EFKA 4R5KA 1I49A 4JN4A 2OBMA 4JWDA 3LMFA 3BUBA 4R5LA 2WYHA 2RAIA 4EZNA 4HR1B 4HYBA 3CZNA 4IW0A 5C5BB 1TQSA 3DOBA 3BVVA 2OBLA 4NPHA 3QNJA 1MJGA 1X03A 2QKWA 4AZCB 4WV7A 1U00A 3ABHA 3SBSA 1QX1A 4G6QA 1I4DA 3VEBA 1TQTA 3F7WA 3O3MB 3DDGA 2Z0OA 3RV1A 3B51X 3D2FA 3HAHA 4JWEA 3LLLA 3L3PA 4R5JA 2Z0VA 4IWPA 3SOGA 2RAJA 3KDRA 3VEAA 1I4TA 2WYIA 2OO2A 4B9QA 3D4ZA 1QWUA 4R5GA 4NSWA 4AZIA 1Q5LA 1DKYA 3BLBA 1BPRA 3DX1A 2X3XA 3BVWA 1W9MA 1DKXA 3O3NB 3PLTA 1O7DC 2ND1A 2GA9D 1E2UA 1Y2OA 2YL9A 3ERCC 3RV0A 3VKHA 4EZTA 2KHOA 3QNIA 2F7PA 2X5CA 2OW7A 4IM2A 4DCNC 3DYTA 4ATMA 1R34A 2YI8A 2YLAA 4AZBA 4AVMA 2YKTA 3I2WA 4HR1A 2D4CA 2QXLA 3Q84A 5C5BA 3M3WA 1LQ7A 4ILIA 1SUFA 3B52X 2N3KA 3L3OM 2BPRA 4AZCA 4IM3A 4FZSA 2PY6A 2F7OA 3O3OB 4H6IA 2YL5A 1R33A 4H6HA 3KAWA 4D8JA 2D1LA 2QFFA 3EJUA 4EZYA 3BVTA 4JWCA 3BUPA 2F7QA 3DQGA 1E1DA 3A98A 2F1AA 1HTYA 3HAJA 1WDZA 4EZZA 2YI9A 3SYVA 4ILGA 4FZPA 3H0XA 3D52A 2Z8YA 3GI7A 3KAVA 3I39X 4F01A 3I01A 4KIKB 4EZQA 1R5EA 4IM0A 2F7RA 3OWGA 1O7DB 4WPEA 4H8SA 4EZXA 4JWIA 3T47A 1ZYLA 4R5IA 4AZ7A 1URUA 1TQUA 2YIAA 4DYLA 3UITA
chains in the Genus database with same CATH topology
2V7YA 4HYBA 4IM2A 4IW0A 4IWQA 1YUWA 3DOBA 1OAOA 2EWFA 4I43A 2OBLA 1SU7A 4NPHA 2YI8A 4FM3A 2OP6A 4EZSA 3QNJA 4UDXX 1MJGA 4PO2A 4HR1A 4WV7A 2QXLA 1U00A 3UITA 4M0MA 3SBSA 4G6QA 4HY9A 2NCZA 4JNEA 4ILIA 2ND0A 3VEBA 1SUFA 3B52X 3F7WA 5FIGA 2N3KA 3L3OM 3O3MB 4UDYX 2BPRA 5FLEX 4FL9A 4IM3A 4JLCA 3DPOA 2PY6A 2YIVX 3T4AG 3O3OB 4H6IA 3RV1A 3B51X 4H6HA 3D2FA 4JNFA 3KAWA 3ZEFA 4ILHB 1GN9A 4JWEA 4D8JA 3N8EA 1GNTA 3SBTB 2QFFA 4R5JA 3QA8A 1OA1A 4IWPA 4E3CA 1CKRA 4EZYA 2RT6A 4EZOA 4F00A 4EZWA 3DPPA 4EZRA 1OA0A 3KDRA 2YIBA 1DG4A 1E9VA 3VEAA 3DPQA 3I04A 1SU6A 3FD9A 4JWCA 4EZVA 3T48A 4B9QA 1DKZA 3ER8C 3DQGA 3T46A 1E1DA 3A98A 4R5GA 3ER9B 4IWOA 3C7NB 7HSCA 4EZZA 2YI9A 4ILGA 1GNLA 1Q5LA 1DKYA 1UPXA 4WV5A 3OHXM 1BPRA 2EX3B 3H0XA 1SU8A 1W9MA 2JNSA 2Z8YA 3GI7A 3KAVA 3I39X 2GAFD 4JL9A 1DKXA 1JQKA 3C7NA 2WINM 4F01A 5TKYA 4MQDA 3O3NB 3I01A 4KIKB 4R5KA 4EZQA 4IM0A 2ND1A 2GA9D 3OWGA 3B53X 1E2UA 4EZXA 4JWIA 3T47A 4JN4A 3ERCC 2OBMA 2LM0A 1ZYLA 3LMFA 4JWDA 4R5IA 4E81A 3RV0A 3VKHA 4R5LA 4EZPA 4EZUA 4EZTA 3T49A 5E84A 2KHOA 2YIAA 4KIKA 3ZEDA 4EZNA 3D2EA 2X5CA 4HR1B
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2V7Y A;  4HYB A;  3C7N A;  2BPR A;  3L3O M;  2WIN M;  4JWC A;  4EZV A;  4F01 A;  5TKY A;  3T48 A;  1YUW A;  4B9Q A;  1DKZ A;  3DOB A;  3DPO A;  4FL9 A;  3DQG A;  3T46 A;  4R5K A;  4EZQ A;  3T4A G;  4H6I A;  4R5G A;  4H6H A;  3D2F A;  4JNF A;  2OP6 A;  4EZX A;  4EZS A;  4JWI A;  3T47 A;  3C7N B;  3QNJ A;  4JN4 A;  7HSC A;  4JWD A;  4E81 A;  4EZZ A;  4PO2 A;  4JWE A;  4R5I A;  4WV7 A;  2QXL A;  1Q5L A;  1U00 A;  3N8E A;  4R5L A;  4EZP A;  1DKY A;  2QFF A;  3T49 A;  4R5J A;  5E84 A;  4EZT A;  4EZU A;  3OHX M;  4WV5 A;  1BPR A;  2KHO A;  4EZY A;  4EZO A;  4HY9 A;  4F00 A;  4JNE A;  1CKR A;  4EZW A;  3DPP A;  4EZR A;  3H0X A;  1DG4 A;  4EZN A;  3D2E A;  3DPQ A;  1DKX A; 
#chains in the Genus database with same CATH topology
 2F1B A;  4AZ6 A;  4IWQ A;  1YUW A;  1ZWW A;  2Q13 A;  2EWF A;  4FM3 A;  2OP6 A;  4EZS A;  1YWM A;  4UDX X;  4PO2 A;  3BUD A;  3CAZ A;  2X3V A;  1X04 A;  3CKD A;  4M0M A;  2NCZ A;  3DDF A;  3EJS A;  2ND0 A;  4UDY X;  4BNE A;  4FL9 A;  2YIV X;  4JNF A;  4ILH B;  1GN9 A;  2X3W A;  3SBT B;  2EFL A;  2F18 A;  3CVR A;  2C08 A;  1CKR A;  4F00 A;  3DPP A;  1OA0 A;  2ELB A;  3DX2 A;  4AZG A;  3CZS A;  2JNK A;  3RPM A;  3I04 A;  1SU6 A;  4NQI A;  4EZV A;  3T48 A;  3ER8 C;  3QWE A;  3T46 A;  2YLL A;  3ACO A;  3DX3 A;  5KBP A;  2YL6 A;  3C7N B;  1GNL A;  3D50 A;  1UPX A;  2Z0N A;  3D4Y A;  3DX0 A;  3BVX A;  2Q12 A;  3BVU A;  5TKY A;  4MQD A;  4AZH A;  4WPC A;  4AZ5 A;  3B53 X;  3D51 A;  4E81 A;  2LM0 A;  3EJR A;  3BUI A;  4EZP A;  2MI7 A;  4EZU A;  2PMR A;  5E84 A;  3T49 A;  1PS3 A;  2V0O A;  3CV5 A;  4KIK A;  3ZED A;  3D2E A;  2O0I 1;  2V7Y A;  2LXY A;  1I4L A;  1OAO A;  4I43 A;  1SU7 A;  1TQW A;  2FIC A;  2OW6 A;  3G9G A;  3Q0K A;  3EJT A;  3OK8 A;  4HY9 A;  4JNE A;  4FZO A;  5FIG A;  4I1Q A;  5FLE X;  4JLC A;  3DPO A;  3T4A G;  3BUQ A;  3ZEF A;  2RAK A;  3EJP A;  3N8E A;  1GNT A;  3QE6 A;  3QA8 A;  1OA1 A;  4AKV A;  4E3C A;  4EZO A;  2RT6 A;  4EZW A;  4EZR A;  2YIB A;  1DG4 A;  1E9V A;  3DPQ A;  2FYV A;  3LVT A;  1HWW A;  2OZN B;  3FD9 A;  1DKZ A;  3DX4 A;  3ER9 B;  4IWO A;  7HSC A;  2YL8 A;  1TQV A;  4WV5 A;  3OHX M;  2EX3 B;  2ALW A;  1SU8 A;  2JNS A;  1HXK A;  1QWN A;  3EJQ A;  2GAF D;  2ZXQ A;  4JL9 A;  2GF4 A;  1JQK A;  3C7N A;  3HAI A;  2WIN M;  2EFK A;  4R5K A;  1I49 A;  4JN4 A;  2OBM A;  4JWD A;  3LMF A;  3BUB A;  4R5L A;  2WYH A;  2RAI A;  4EZN A;  4HR1 B;  4HYB A;  3CZN A;  4IW0 A;  5C5B B;  1TQS A;  3DOB A;  3BVV A;  2OBL A;  4NPH A;  3QNJ A;  1MJG A;  1X03 A;  2QKW A;  4AZC B;  4WV7 A;  1U00 A;  3ABH A;  3SBS A;  1QX1 A;  4G6Q A;  1I4D A;  3VEB A;  1TQT A;  3F7W A;  3O3M B;  3DDG A;  2Z0O A;  3RV1 A;  3B51 X;  3D2F A;  3HAH A;  4JWE A;  3LLL A;  3L3P A;  4R5J A;  2Z0V A;  4IWP A;  3SOG A;  2RAJ A;  3KDR A;  3VEA A;  1I4T A;  2WYI A;  2OO2 A;  4B9Q A;  3D4Z A;  1QWU A;  4R5G A;  4NSW A;  4AZI A;  1Q5L A;  1DKY A;  3BLB A;  1BPR A;  3DX1 A;  2X3X A;  3BVW A;  1W9M A;  1DKX A;  3O3N B;  3PLT A;  1O7D C;  2ND1 A;  2GA9 D;  1E2U A;  1Y2O A;  2YL9 A;  3ERC C;  3RV0 A;  3VKH A;  4EZT A;  2KHO A;  3QNI A;  2F7P A;  2X5C A;  2OW7 A;  4IM2 A;  4DCN C;  3DYT A;  4ATM A;  1R34 A;  2YI8 A;  2YLA A;  4AZB A;  4AVM A;  2YKT A;  3I2W A;  4HR1 A;  2D4C A;  2QXL A;  3Q84 A;  5C5B A;  3M3W A;  1LQ7 A;  4ILI A;  1SUF A;  3B52 X;  2N3K A;  3L3O M;  2BPR A;  4AZC A;  4IM3 A;  4FZS A;  2PY6 A;  2F7O A;  3O3O B;  4H6I A;  2YL5 A;  1R33 A;  4H6H A;  3KAW A;  4D8J A;  2D1L A;  2QFF A;  3EJU A;  4EZY A;  3BVT A;  4JWC A;  3BUP A;  2F7Q A;  3DQG A;  1E1D A;  3A98 A;  2F1A A;  1HTY A;  3HAJ A;  1WDZ A;  4EZZ A;  2YI9 A;  3SYV A;  4ILG A;  4FZP A;  3H0X A;  3D52 A;  2Z8Y A;  3GI7 A;  3KAV A;  3I39 X;  4F01 A;  3I01 A;  4KIK B;  4EZQ A;  1R5E A;  4IM0 A;  2F7R A;  3OWG A;  1O7D B;  4WPE A;  4H8S A;  4EZX A;  4JWI A;  3T47 A;  1ZYL A;  4R5I A;  4AZ7 A;  1URU A;  1TQU A;  2YIA A;  4DYL A;  3UIT A; 
#chains in the Genus database with same CATH homology
 2V7Y A;  4HYB A;  4IM2 A;  4IW0 A;  4IWQ A;  1YUW A;  3DOB A;  1OAO A;  2EWF A;  4I43 A;  2OBL A;  1SU7 A;  4NPH A;  2YI8 A;  4FM3 A;  2OP6 A;  4EZS A;  3QNJ A;  4UDX X;  1MJG A;  4PO2 A;  4HR1 A;  4WV7 A;  2QXL A;  1U00 A;  3UIT A;  4M0M A;  3SBS A;  4G6Q A;  4HY9 A;  2NCZ A;  4JNE A;  4ILI A;  2ND0 A;  3VEB A;  1SUF A;  3B52 X;  3F7W A;  5FIG A;  2N3K A;  3L3O M;  3O3M B;  4UDY X;  2BPR A;  5FLE X;  4FL9 A;  4IM3 A;  4JLC A;  3DPO A;  2PY6 A;  2YIV X;  3T4A G;  3O3O B;  4H6I A;  3RV1 A;  3B51 X;  4H6H A;  3D2F A;  4JNF A;  3KAW A;  3ZEF A;  4ILH B;  1GN9 A;  4JWE A;  4D8J A;  3N8E A;  1GNT A;  3SBT B;  2QFF A;  4R5J A;  3QA8 A;  1OA1 A;  4IWP A;  4E3C A;  1CKR A;  4EZY A;  2RT6 A;  4EZO A;  4F00 A;  4EZW A;  3DPP A;  4EZR A;  1OA0 A;  3KDR A;  2YIB A;  1DG4 A;  1E9V A;  3VEA A;  3DPQ A;  3I04 A;  1SU6 A;  3FD9 A;  4JWC A;  4EZV A;  3T48 A;  4B9Q A;  1DKZ A;  3ER8 C;  3DQG A;  3T46 A;  1E1D A;  3A98 A;  4R5G A;  3ER9 B;  4IWO A;  3C7N B;  7HSC A;  4EZZ A;  2YI9 A;  4ILG A;  1GNL A;  1Q5L A;  1DKY A;  1UPX A;  4WV5 A;  3OHX M;  1BPR A;  2EX3 B;  3H0X A;  1SU8 A;  1W9M A;  2JNS A;  2Z8Y A;  3GI7 A;  3KAV A;  3I39 X;  2GAF D;  4JL9 A;  1DKX A;  1JQK A;  3C7N A;  2WIN M;  4F01 A;  5TKY A;  4MQD A;  3O3N B;  3I01 A;  4KIK B;  4R5K A;  4EZQ A;  4IM0 A;  2ND1 A;  2GA9 D;  3OWG A;  3B53 X;  1E2U A;  4EZX A;  4JWI A;  3T47 A;  4JN4 A;  3ERC C;  2OBM A;  2LM0 A;  1ZYL A;  3LMF A;  4JWD A;  4R5I A;  4E81 A;  3RV0 A;  3VKH A;  4R5L A;  4EZP A;  4EZU A;  4EZT A;  3T49 A;  5E84 A;  2KHO A;  2YIA A;  4KIK A;  3ZED A;  4EZN A;  3D2E A;  2X5C A;  4HR1 B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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