4KECA

Sbhct-complex form
Total Genus 117
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
117
sequence length
448
structure length
434
Chain Sequence
b'MKITVRGSEMVYPAAETPRRRLWNSGPDLVVPRFHTPSVYFFRRRDADGNDLTAADGSFFDGARMRRALAEALVPFYPMAGRLARDEDGRVEIDCNAAGVLFQEADAPDATIDYFGDFAPTMELKRLIPTVDFSDDTAFPLLVLQVTHFKCGGVAIGVGMQHHVADGFSGLHFINSWADLCRGVPIAVMPFIDRSLLRARDPPAPVYPHVEYQPAPAMLTPPAAVAIFKLSRAELGRLRSQVPAREREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCATDGRQRLQPPLPEGYFGNVIFTATPLANAGTVTAGVAEGAAVIQAALDRMDDGYCRSALDYLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSANRDGSLSVAISLQAEHMEKFRKLIYDF'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Hydroxycinnamoyl-CoA:shikimate hydroxycinnamoyl transferase
publication title Elucidation of the structure and reaction mechanism of sorghum hydroxycinnamoyltransferase and its structural relationship to other coenzyme a-dependent transferases and synthases.
pubmed doi rcsb
source organism Sorghum bicolor
molecule tags Transferase
total genus 117
structure length 434
sequence length 448
ec nomenclature
pdb deposition date 2013-04-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02458 Transferase Transferase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 4kecA02
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 4kecA01
1SCZA 4KE4A 5KJVA 1CLAA 3FP0A 4JN3A 1C4TA 5DUAA 5KJUA 1L5AA 4N72A 2JGPA 4HVMA 1EAAA 1DPBA 2II3A 2II5A 4JN5A 5KJTA 3CLAA 3U9BA 4CLAA 5FALA 2E1UA 2ZBAA 1XL7A 2XR7A 1E2OA 2CLAA 1Q9JA 2BGHA 2RKVA 2I9DA 4G2MA 3FOTA 1CIAA 5FANA 3B30A 1EAFA 1Q23A 1XL8A 2E1VA 2RKTA 1EABA 1EADA 5T3EA 1QCAA 4G0BA 2E1TA 4KECA 5KJWA 2VSQA 5DU9A 1XMCA 3B2SA 1EACA 1NOCB 5KJSA 2XHGA 2IHWA 4G22A 1DPDA 3U9FA 1DPCA 1XMDA 1EAEA 1PD5A 3L60A 3MAEA 2II4A
chains in the Genus database with same CATH superfamily
5KJVA 2DEBA 1NM8A 2E1UA 2ZBAA 1XL7A 2CLAA 2I9DA 2FW3A 5FANA 1T7QA 2FY3A 1NDBA 1EAFA 1Q23A 2E1VA 1EADA 5T3EA 1QCAA 2H3UA 2VSQA 1XMCA 2XHGA 1PD5A 3L60A 3MAEA 1SCZA 2H3WA 3FP0A 1C4TA 1S5OA 4N72A 5KJTA 1EAAA 4JN5A 3CLAA 4CLAA 1E2OA 1Q9JA 2BGHA 1CIAA 1XL8A 1EABA 4G0BA 1T1UA 2E1TA 5KJWA 1T7NA 1NOCB 1Q6XA 2IHWA 1DPCA 1XMDA 1DPBA 2FY4A 1CLAA 4JN3A 5KJUA 5DUAA 2JGPA 2II5A 3U9BA 5FALA 2FY5A 2RKVA 4EYWA 4G2MA 3FOTA 4EPHA 1T7OA 2RKTA 4EP9A 4KECA 1EACA 5KJSA 4G22A 2FY2A 1EAEA 4KE4A 1L5AA 4HVMA 2II3A 2RCUA 2H3PA 2XR7A 1NDIA 2FYOA 3B30A 5DU9A 1NDFA 2H4TA 3B2SA 1DPDA 3U9FA 2II4A
chains in the Genus database with same CATH topology
1SCZA 4KE4A 5KJVA 1CLAA 3FP0A 4JN3A 1C4TA 5DUAA 5KJUA 1L5AA 4N72A 2JGPA 4HVMA 1EAAA 1DPBA 2II3A 2II5A 4JN5A 5KJTA 3CLAA 3U9BA 4CLAA 5FALA 2E1UA 2ZBAA 1XL7A 2XR7A 1E2OA 2CLAA 1Q9JA 2BGHA 2RKVA 2I9DA 4G2MA 3FOTA 1CIAA 5FANA 3B30A 1EAFA 1Q23A 1XL8A 2E1VA 2RKTA 1EABA 1EADA 5T3EA 1QCAA 4G0BA 2E1TA 4KECA 5KJWA 2VSQA 5DU9A 1XMCA 3B2SA 1EACA 1NOCB 5KJSA 2XHGA 2IHWA 4G22A 1DPDA 3U9FA 1DPCA 1XMDA 1EAEA 1PD5A 3L60A 3MAEA 2II4A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1SCZ A;  4KE4 A;  5KJV A;  1CLA A;  3FP0 A;  4JN3 A;  1C4T A;  5DUA A;  5KJU A;  1L5A A;  4N72 A;  2JGP A;  4HVM A;  1EAA A;  1DPB A;  2II3 A;  2II5 A;  4JN5 A;  5KJT A;  3CLA A;  3U9B A;  4CLA A;  5FAL A;  2E1U A;  2ZBA A;  1XL7 A;  2XR7 A;  1E2O A;  2CLA A;  1Q9J A;  2BGH A;  2RKV A;  2I9D A;  4G2M A;  3FOT A;  1CIA A;  5FAN A;  3B30 A;  1EAF A;  1Q23 A;  1XL8 A;  2E1V A;  2RKT A;  1EAB A;  1EAD A;  5T3E A;  1QCA A;  4G0B A;  2E1T A;  4KEC A;  5KJW A;  2VSQ A;  5DU9 A;  1XMC A;  3B2S A;  1EAC A;  1NOC B;  5KJS A;  2XHG A;  2IHW A;  4G22 A;  1DPD A;  3U9F A;  1DPC A;  1XMD A;  1EAE A;  1PD5 A;  3L60 A;  3MAE A;  2II4 A; 
#chains in the Genus database with same CATH topology
 5KJV A;  2DEB A;  1NM8 A;  2E1U A;  2ZBA A;  1XL7 A;  2CLA A;  2I9D A;  2FW3 A;  5FAN A;  1T7Q A;  2FY3 A;  1NDB A;  1EAF A;  1Q23 A;  2E1V A;  1EAD A;  5T3E A;  1QCA A;  2H3U A;  2VSQ A;  1XMC A;  2XHG A;  1PD5 A;  3L60 A;  3MAE A;  1SCZ A;  2H3W A;  3FP0 A;  1C4T A;  1S5O A;  4N72 A;  5KJT A;  1EAA A;  4JN5 A;  3CLA A;  4CLA A;  1E2O A;  1Q9J A;  2BGH A;  1CIA A;  1XL8 A;  1EAB A;  4G0B A;  1T1U A;  2E1T A;  5KJW A;  1T7N A;  1NOC B;  1Q6X A;  2IHW A;  1DPC A;  1XMD A;  1DPB A;  2FY4 A;  1CLA A;  4JN3 A;  5KJU A;  5DUA A;  2JGP A;  2II5 A;  3U9B A;  5FAL A;  2FY5 A;  2RKV A;  4EYW A;  4G2M A;  3FOT A;  4EPH A;  1T7O A;  2RKT A;  4EP9 A;  4KEC A;  1EAC A;  5KJS A;  4G22 A;  2FY2 A;  1EAE A;  4KE4 A;  1L5A A;  4HVM A;  2II3 A;  2RCU A;  2H3P A;  2XR7 A;  1NDI A;  2FYO A;  3B30 A;  5DU9 A;  1NDF A;  2H4T A;  3B2S A;  1DPD A;  3U9F A;  2II4 A; 
#chains in the Genus database with same CATH homology
 1SCZ A;  4KE4 A;  5KJV A;  1CLA A;  3FP0 A;  4JN3 A;  1C4T A;  5DUA A;  5KJU A;  1L5A A;  4N72 A;  2JGP A;  4HVM A;  1EAA A;  1DPB A;  2II3 A;  2II5 A;  4JN5 A;  5KJT A;  3CLA A;  3U9B A;  4CLA A;  5FAL A;  2E1U A;  2ZBA A;  1XL7 A;  2XR7 A;  1E2O A;  2CLA A;  1Q9J A;  2BGH A;  2RKV A;  2I9D A;  4G2M A;  3FOT A;  1CIA A;  5FAN A;  3B30 A;  1EAF A;  1Q23 A;  1XL8 A;  2E1V A;  2RKT A;  1EAB A;  1EAD A;  5T3E A;  1QCA A;  4G0B A;  2E1T A;  4KEC A;  5KJW A;  2VSQ A;  5DU9 A;  1XMC A;  3B2S A;  1EAC A;  1NOC B;  5KJS A;  2XHG A;  2IHW A;  4G22 A;  1DPD A;  3U9F A;  1DPC A;  1XMD A;  1EAE A;  1PD5 A;  3L60 A;  3MAE A;  2II4 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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