4KWYA

Crystal structure of a putative lipoprotein (cc_3750) from caulobacter crescentus cb15 at 2.40 a resolution
Total Genus 45
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
45
sequence length
137
structure length
137
Chain Sequence
AGVESGLSSIETVAAEGRGGYLLREQLDDALAHRQGSPAAYKLYLSVNEQRFARGVRLDNVANRFELRMSVDWRLLDAKNGAEVHKGRTDVSVTYDSADQPYAAIAAQQDGQERAAAEAARKIQLDLATWLAGKKPA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transport protein
source organism Caulobacter crescentus
publication title Crystal structure of a hypothetical protein (CC_3750) from Caulobacter crescentus CB15 at 2.40 A resolution (PSI Community Target, Shapiro)
rcsb
molecule keywords Putative uncharacterized protein
total genus 45
structure length 137
sequence length 137
chains with identical sequence B
ec nomenclature
pdb deposition date 2013-05-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF04390 LptE Lipopolysaccharide-assembly
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.160.150 Alpha Beta 2-Layer Sandwich Double Stranded RNA Binding Domain Lipoprotein like domain 4kwyA00
4RHBB 4NHRA 2JXPA 4RH8A 5IV8B 2R76A 3BF2A 4Q35B 5IXMB 4N4RB 5TSEA 4KWYA 2N8XA
chains in the Genus database with same CATH superfamily
1UHZA 1RC7A 1YUIA 2M1SA 2EM8A 1RMDA 2RSMA 2EPPA 1FJGE 2LJUA 1X6EA 4DV1E 1PDAA 2K4VA 2GLIA 3KWRA 4F54A 4JI8E 2EN6A 1GZ6A 4I8OA 2EE8A 1SR9A 1A1HA 1N34E 1YFHA 2ENCA 4ZYGA 2L2MA 3IWDA 1IBLE 2EN3A 2YTPA 4BHCA 2DLKA 4MLQA 1BBGA 4WYQB 2EMZA 1WRJA 2UXCE 3UK3C 4DUYE 2YSOA 2KHXA 2L6MA 2RQLA 5KL7A 1ZU1A 2H36X 4KHPE 3THOB 2ADRA 3C6KA 2DGCA 2EPOA 5FLXC 3AV0A 1WXRA 3MSWA 3BF2A 2EQ0A 2MKDA 2V89A 3RMPA 1JK2A 5KL6A 2PRTA 2NUGA 2JOXA 2EPUA 4IS1C 4DR6E 2MDGA 4R2QA 1WHQA 2EPKX 2LUPB 4F2JC 2B3TB 4F6NA 4M9VC 3KZZA 4KZSA 3EPLA 5LL6R 1T4OA 3AUZA 5F3WA 2LJHA 4F9CB 4NZVA 2EWLA 4Q35B 1RQ0A 1WHNA 2YRHA 4K0KE 2YPNA 2NA2A 5LMUE 1B69A 4JYAE 2EPAA 1O0WA 1EH8A 2EPLX 1EH7A 3DJWA 4L8NA 4DV7E 1XMOE 2DMYA 2ODRC 4WSPA 2JWOA 2VF1A 4R2PA 2IHR1 1UN6B 2EMYA 2EN4A 2R76A 3F6HA 1TF6A 1NCSA 1IMUA 1N3GA 2YZTA 2DIXA 2V88A 5DNYA 2EORA 5AC5A 3L00A 2WZOA 4DV0E 4JI0E 2GHFA 2EOXA 4DMIA 2NUEA 1GQEA 2RS6A 5AC4A 2EM2A 5IXMB 1YPNA 2RSIA 5T6JA 2UUAE 1IQSA 4R2AA 1Z1BA 2EPXA 2CT1A 1N33E 2A25A 4JI2E 2WCC3 2KOUA 4M30A 4BC9A 1L4SA 4WSGA 4R2DA 2EMFA 2EOMA 2LBSB 3EQ1A 1J26A 5A6JA 1KYQA 3HPZA 1JK1A 4B3ME 4JI1E 2FTXB 1P47A 4ZYHA 2CPNA 3J80C 4DUZE 2EM3A 2FGGA 2EL6A 2EJ4A 4TUIA 4FK5C 4LF6E 2E1MA 3F6GA 4DR3E 2UXBE 4WPYA 2EPCA 4JI7E 1YYOA 1T4NA 2EZ6A 4NXME 2EOSA 3C4TA 4GKJE 2L2NA 3K6QA 3VYYA 3T1YE 2LMZA 1A1KA 4LF9E 2EM5A 2EOIA 2LTSA 4AQYE 3ADGA 2V85A 4WX9A 3HTXA 2HHHE 1X6HA 4X9JA 5IV8B 2EN7A 2LVHA 2DB2A 2VRDA 2N3GA 2EMWA 2FV4B 3ZOQB 2EN8A 3EPHA 3VK6A 2L2KB 4X66E 2G7HA 4GKKE 1QU6A 1EKZA 3ECRA 1A1IA 4DR1E 4JI4E 1XMQE 4BS9A 3BBGA 2JXPA 1I94E 2EM7A 2NUFA 2BB8A 2ENHA 2HC5A 2V83A 2YTDA 1X3CA 3M99B 4F9AB 4RHBB 4X64E 1T39A 3C4BA 2B7TA 2J7JA 4RH8A 1YSAC 2F8BA 1IQOA 2LTRA 1ZBQA 1SFEA 3J81C 4DR7E 1F2IG 2V86A 2LE2A 5LLQA 4O43A 2B7VA 4O24A 3THNA 1ZBTA 1YYWA 1PJTA 1T4LB 4LF4E 2EMHA 2E72A 4LF8E 1A1FA 1XNRE 4O5GA 1X47A 4B3TE 2DSYA 2L92A 2MC5A 1N32E 2EP3A 2EMKA 5AASA 2L33A 1MGTA 2JVAA 2EQ1A 2LO3A 2K7IA 4DR5E 3EPJA 1YZ9A 4BMJA 5BR8E 1AH5A 4YHHE 1NEIA 4M0VA 4B3SE 5KL2A 4JI3E 3MHHC 2Q8UA 5AE1A 5CFFE 2EMIA 2EPZA 2ODRD 1DGCA 4J8ZA 1HNXE 2EL4A 2JOBA 2L3JA 2EOOA 4M2ZA 2V8QB 2EQ3A 4DR2E 5KL3A 2EMLA 1IBKE 2EL5A 2MKNA 2ENAA 3JU0A 2YTEA 2ELYA 2WBUA 2ZM6E 1MEYC 4BHBA 5A6BA 1STUA 3ADLA 1HNWE 4LU9A 2I9IA 2LUQA 2M4IA 2EPMX 3BGHA 1PKPA 3LLHA 2MDRA 5TSEA 3IWCA 2UXDE 1X49A 3KZYA 1HR0E 1ZR9A 2EOFA 2EOEA 3VYXA 2EMGA 3BIDA 4ZYDA 1YUJA 3DF6A 4JI6E 2YU5A 1T38A 1TN9A 2EMCA 1J5EE 3OMLA 2EOJA 4OOGC 4LFBE 1IBME 2E5LE 2EOZA 2EM9A 4JI5E 2EOHA 2EMXA 3P1XA 4NXNE 2RTXA 5A6AA 2EN1A 2MC6A 4DV6E 2YTGA 1PJSA 1EH6A 4NHRA 1GTKA 2WBSA 1QNTA 2EOQA 2DMIA 3QG5C 4WXCA 2V87A 2HJJA 2M7QA 2VE7C 2EPRA 4ZYEA 4X8WA 5A6KA 2DRPA 3LMLA 2RPCA 2N3HA 1UBDC 4LFAE 3MHSC 4WXDA 1XNQE 3EPKA 4OX9E 4X62E 2LT7A 3HQ1A 3H09A 2YTFA 5A69A 2YWQA 3J7Yp 3T1HE 2ELZA 3HXLA 4P78A 2RS7A 2EM6A 2R1FA 4N4RB 4JV5E 5LMNE 2YTQA 2JR1A 5AE2A 4L5NC 2BBGA 4BC7A 1N36E 3OTOE 2WBTA 4YY3E 4R03A 2JYAA 2YSPA 2YTJA 2YRMA 2L3CA 3JAMC 4DKKA 1ZAAC 4X65E 2M9AA 1X48A 1G2FC 1HNZE 1BBOA 2JY9A 2LV2A 1TF3A 2UUCE 5IWAE 4O4KA 2D9HA 1FKAE 3FIGA 3VHTB 3IWBA 2EM0A 2UU9E 2YT4A 4DV2E 2UUBE 4HTGA 2EMBA 4BCAA 2EM4A 5KL4A 4TUGA 2LRSA 1LLMC 1YYKA 1A1JA 2YRKA 1UILA 2LCEA 5IT9C 4R2RA 2VQEE 2YTOA 3C6MA 3JTZA 1A1GA 2I13A 4LTYA 4P7DA 2GPIA 2CSHA 2N8XA 5AE3A 1BB8A 4LFCE 2KONA 3TQMA 2JPAA 1DQ3A 4Q28A 3ADJA 2CTDA 5KL5A 1X6FA 1KJKA 2NABA 4MLVA 2EMAA 5A2QC 2B9DA 2YTIA 4R2SA 1X5WA 2EOYA 4R2CA 4GZNC 2YU8A 1DI2A 4DV5E 4BBYA 2JP9A 4DV3E 4KWYA 1AAYA 4F6MA 4LF5E 1PJQA 2YTNA 4DV4E 3HPSA 4GEQB 4HEIA 1A1LA 4LF7E 2EN2A 4F9BB 2DLQA 4DR4E 4R8OA 1WJPA 5A6BD 2HGHA 3ADIA 2F4VE 4IJDA 2L8TA 4WFTA 4R2EA 5ADZA 2VQFE 3J7AG 2EPNA 1G2DC 4B3RE
chains in the Genus database with same CATH topology
4RHBB 4NHRA 2JXPA 4RH8A 5IV8B 2R76A 3BF2A 4Q35B 5IXMB 4N4RB 5TSEA 4KWYA 2N8XA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4RHB B;  4NHR A;  2JXP A;  4RH8 A;  5IV8 B;  2R76 A;  3BF2 A;  4Q35 B;  5IXM B;  4N4R B;  5TSE A;  4KWY A;  2N8X A; 
#chains in the Genus database with same CATH topology
 1UHZ A;  1RC7 A;  1YUI A;  2M1S A;  2EM8 A;  1RMD A;  2RSM A;  2EPP A;  1FJG E;  2LJU A;  1X6E A;  4DV1 E;  1PDA A;  2K4V A;  2GLI A;  3KWR A;  4F54 A;  4JI8 E;  2EN6 A;  1GZ6 A;  4I8O A;  2EE8 A;  1SR9 A;  1A1H A;  1N34 E;  1YFH A;  2ENC A;  4ZYG A;  2L2M A;  3IWD A;  1IBL E;  2EN3 A;  2YTP A;  4BHC A;  2DLK A;  4MLQ A;  1BBG A;  4WYQ B;  2EMZ A;  1WRJ A;  2UXC E;  3UK3 C;  4DUY E;  2YSO A;  2KHX A;  2L6M A;  2RQL A;  5KL7 A;  1ZU1 A;  2H36 X;  4KHP E;  3THO B;  2ADR A;  3C6K A;  2DGC A;  2EPO A;  5FLX C;  3AV0 A;  1WXR A;  3MSW A;  3BF2 A;  2EQ0 A;  2MKD A;  2V89 A;  3RMP A;  1JK2 A;  5KL6 A;  2PRT A;  2NUG A;  2JOX A;  2EPU A;  4IS1 C;  4DR6 E;  2MDG A;  4R2Q A;  1WHQ A;  2EPK X;  2LUP B;  4F2J C;  2B3T B;  4F6N A;  4M9V C;  3KZZ A;  4KZS A;  3EPL A;  5LL6 R;  1T4O A;  3AUZ A;  5F3W A;  2LJH A;  4F9C B;  4NZV A;  2EWL A;  4Q35 B;  1RQ0 A;  1WHN A;  2YRH A;  4K0K E;  2YPN A;  2NA2 A;  5LMU E;  1B69 A;  4JYA E;  2EPA A;  1O0W A;  1EH8 A;  2EPL X;  1EH7 A;  3DJW A;  4L8N A;  4DV7 E;  1XMO E;  2DMY A;  2ODR C;  4WSP A;  2JWO A;  2VF1 A;  4R2P A;  2IHR 1;  1UN6 B;  2EMY A;  2EN4 A;  2R76 A;  3F6H A;  1TF6 A;  1NCS A;  1IMU A;  1N3G A;  2YZT A;  2DIX A;  2V88 A;  5DNY A;  2EOR A;  5AC5 A;  3L00 A;  2WZO A;  4DV0 E;  4JI0 E;  2GHF A;  2EOX A;  4DMI A;  2NUE A;  1GQE A;  2RS6 A;  5AC4 A;  2EM2 A;  5IXM B;  1YPN A;  2RSI A;  5T6J A;  2UUA E;  1IQS A;  4R2A A;  1Z1B A;  2EPX A;  2CT1 A;  1N33 E;  2A25 A;  4JI2 E;  2WCC 3;  2KOU A;  4M30 A;  4BC9 A;  1L4S A;  4WSG A;  4R2D A;  2EMF A;  2EOM A;  2LBS B;  3EQ1 A;  1J26 A;  5A6J A;  1KYQ A;  3HPZ A;  1JK1 A;  4B3M E;  4JI1 E;  2FTX B;  1P47 A;  4ZYH A;  2CPN A;  3J80 C;  4DUZ E;  2EM3 A;  2FGG A;  2EL6 A;  2EJ4 A;  4TUI A;  4FK5 C;  4LF6 E;  2E1M A;  3F6G A;  4DR3 E;  2UXB E;  4WPY A;  2EPC A;  4JI7 E;  1YYO A;  1T4N A;  2EZ6 A;  4NXM E;  2EOS A;  3C4T A;  4GKJ E;  2L2N A;  3K6Q A;  3VYY A;  3T1Y E;  2LMZ A;  1A1K A;  4LF9 E;  2EM5 A;  2EOI A;  2LTS A;  4AQY E;  3ADG A;  2V85 A;  4WX9 A;  3HTX A;  2HHH E;  1X6H A;  4X9J A;  5IV8 B;  2EN7 A;  2LVH A;  2DB2 A;  2VRD A;  2N3G A;  2EMW A;  2FV4 B;  3ZOQ B;  2EN8 A;  3EPH A;  3VK6 A;  2L2K B;  4X66 E;  2G7H A;  4GKK E;  1QU6 A;  1EKZ A;  3ECR A;  1A1I A;  4DR1 E;  4JI4 E;  1XMQ E;  4BS9 A;  3BBG A;  2JXP A;  1I94 E;  2EM7 A;  2NUF A;  2BB8 A;  2ENH A;  2HC5 A;  2V83 A;  2YTD A;  1X3C A;  3M99 B;  4F9A B;  4RHB B;  4X64 E;  1T39 A;  3C4B A;  2B7T A;  2J7J A;  4RH8 A;  1YSA C;  2F8B A;  1IQO A;  2LTR A;  1ZBQ A;  1SFE A;  3J81 C;  4DR7 E;  1F2I G;  2V86 A;  2LE2 A;  5LLQ A;  4O43 A;  2B7V A;  4O24 A;  3THN A;  1ZBT A;  1YYW A;  1PJT A;  1T4L B;  4LF4 E;  2EMH A;  2E72 A;  4LF8 E;  1A1F A;  1XNR E;  4O5G A;  1X47 A;  4B3T E;  2DSY A;  2L92 A;  2MC5 A;  1N32 E;  2EP3 A;  2EMK A;  5AAS A;  2L33 A;  1MGT A;  2JVA A;  2EQ1 A;  2LO3 A;  2K7I A;  4DR5 E;  3EPJ A;  1YZ9 A;  4BMJ A;  5BR8 E;  1AH5 A;  4YHH E;  1NEI A;  4M0V A;  4B3S E;  5KL2 A;  4JI3 E;  3MHH C;  2Q8U A;  5AE1 A;  5CFF E;  2EMI A;  2EPZ A;  2ODR D;  1DGC A;  4J8Z A;  1HNX E;  2EL4 A;  2JOB A;  2L3J A;  2EOO A;  4M2Z A;  2V8Q B;  2EQ3 A;  4DR2 E;  5KL3 A;  2EML A;  1IBK E;  2EL5 A;  2MKN A;  2ENA A;  3JU0 A;  2YTE A;  2ELY A;  2WBU A;  2ZM6 E;  1MEY C;  4BHB A;  5A6B A;  1STU A;  3ADL A;  1HNW E;  4LU9 A;  2I9I A;  2LUQ A;  2M4I A;  2EPM X;  3BGH A;  1PKP A;  3LLH A;  2MDR A;  5TSE A;  3IWC A;  2UXD E;  1X49 A;  3KZY A;  1HR0 E;  1ZR9 A;  2EOF A;  2EOE A;  3VYX A;  2EMG A;  3BID A;  4ZYD A;  1YUJ A;  3DF6 A;  4JI6 E;  2YU5 A;  1T38 A;  1TN9 A;  2EMC A;  1J5E E;  3OML A;  2EOJ A;  4OOG C;  4LFB E;  1IBM E;  2E5L E;  2EOZ A;  2EM9 A;  4JI5 E;  2EOH A;  2EMX A;  3P1X A;  4NXN E;  2RTX A;  5A6A A;  2EN1 A;  2MC6 A;  4DV6 E;  2YTG A;  1PJS A;  1EH6 A;  4NHR A;  1GTK A;  2WBS A;  1QNT A;  2EOQ A;  2DMI A;  3QG5 C;  4WXC A;  2V87 A;  2HJJ A;  2M7Q A;  2VE7 C;  2EPR A;  4ZYE A;  4X8W A;  5A6K A;  2DRP A;  3LML A;  2RPC A;  2N3H A;  1UBD C;  4LFA E;  3MHS C;  4WXD A;  1XNQ E;  3EPK A;  4OX9 E;  4X62 E;  2LT7 A;  3HQ1 A;  3H09 A;  2YTF A;  5A69 A;  2YWQ A;  3J7Y p;  3T1H E;  2ELZ A;  3HXL A;  4P78 A;  2RS7 A;  2EM6 A;  2R1F A;  4N4R B;  4JV5 E;  5LMN E;  2YTQ A;  2JR1 A;  5AE2 A;  4L5N C;  2BBG A;  4BC7 A;  1N36 E;  3OTO E;  2WBT A;  4YY3 E;  4R03 A;  2JYA A;  2YSP A;  2YTJ A;  2YRM A;  2L3C A;  3JAM C;  4DKK A;  1ZAA C;  4X65 E;  2M9A A;  1X48 A;  1G2F C;  1HNZ E;  1BBO A;  2JY9 A;  2LV2 A;  1TF3 A;  2UUC E;  5IWA E;  4O4K A;  2D9H A;  1FKA E;  3FIG A;  3VHT B;  3IWB A;  2EM0 A;  2UU9 E;  2YT4 A;  4DV2 E;  2UUB E;  4HTG A;  2EMB A;  4BCA A;  2EM4 A;  5KL4 A;  4TUG A;  2LRS A;  1LLM C;  1YYK A;  1A1J A;  2YRK A;  1UIL A;  2LCE A;  5IT9 C;  4R2R A;  2VQE E;  2YTO A;  3C6M A;  3JTZ A;  1A1G A;  2I13 A;  4LTY A;  4P7D A;  2GPI A;  2CSH A;  2N8X A;  5AE3 A;  1BB8 A;  4LFC E;  2KON A;  3TQM A;  2JPA A;  1DQ3 A;  4Q28 A;  3ADJ A;  2CTD A;  5KL5 A;  1X6F A;  1KJK A;  2NAB A;  4MLV A;  2EMA A;  5A2Q C;  2B9D A;  2YTI A;  4R2S A;  1X5W A;  2EOY A;  4R2C A;  4GZN C;  2YU8 A;  1DI2 A;  4DV5 E;  4BBY A;  2JP9 A;  4DV3 E;  4KWY A;  1AAY A;  4F6M A;  4LF5 E;  1PJQ A;  2YTN A;  4DV4 E;  3HPS A;  4GEQ B;  4HEI A;  1A1L A;  4LF7 E;  2EN2 A;  4F9B B;  2DLQ A;  4DR4 E;  4R8O A;  1WJP A;  5A6B D;  2HGH A;  3ADI A;  2F4V E;  4IJD A;  2L8T A;  4WFT A;  4R2E A;  5ADZ A;  2VQF E;  3J7A G;  2EPN A;  1G2D C;  4B3R E; 
#chains in the Genus database with same CATH homology
 4RHB B;  4NHR A;  2JXP A;  4RH8 A;  5IV8 B;  2R76 A;  3BF2 A;  4Q35 B;  5IXM B;  4N4R B;  5TSE A;  4KWY A;  2N8X A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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