4LG5B

Aba-mimicking ligand quinabactin in complex with aba receptor pyl2 and pp2c hab1
Total Genus 70
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
70
sequence length
323
structure length
298
Chain Sequence
LDCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVIDLKAQRK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase/receptor/inhibitor
molecule keywords Abscisic acid receptor PYL2
publication title An ABA-mimicking ligand that reduces water loss and promotes drought resistance in plants.
pubmed doi rcsb
source organism Arabidopsis thaliana
total genus 70
structure length 298
sequence length 323
ec nomenclature ec 3.1.3.16: Protein-serine/threonine phosphatase.
pdb deposition date 2013-06-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF00481 PP2C Protein phosphatase 2C
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.40.10 Alpha Beta 4-Layer Sandwich Phosphatase 2c; domain 1 PPM-type phosphatase domain 4lg5B00
3T9QA 5JO1B 3FXLA 2J86A 3N3CA 3NMNB 2CM1A 2Y09A 3FXJA 3NMTB 3D8KA 2ISNA 3W40A 4LA7B 2I0OA 3QN1B 4LGBB 4OICB 2JFRA 3UJGB 4JNDA 3W44A 2V06A 2J4OA 3NMVB 4RAGA 2XZVA 3EQ2A 1A6QA 4RAFA 2IQ1A 4DS8B 3PU9A 4DA1A 2JFSA 3MQ3A 4YZGA 4N0GA 3ZT9A 3FXKA 3UJLB 3ES2A 3RNRA 3UJKA 2PNQA 3FXMA 2POPA 5D2UA 5F1MA 3KE6A 3ZVUB 4WVOB 3FXOA 2I44A 3JRQA 3F79A 4LGAB 3KB3B 3T91A 1TXOA 3W43A 2IRMA 5JO2B 3RT0A 4LG5B 5ITIA 2JFTA 3W41A 3KDJB 2P8EA 2PK0A 4YZHA 4RA2A 2POMA 2J82A 3W45A 3W42A
chains in the Genus database with same CATH superfamily
3T9QA 5JO1B 3FXLA 2J86A 3N3CA 3NMNB 2CM1A 2Y09A 3FXJA 3NMTB 3D8KA 2ISNA 3W40A 4LA7B 2I0OA 3QN1B 4LGBB 4OICB 4IIKA 2JFRA 3UJGB 4JNDA 3W44A 2V06A 2J4OA 3NMVB 4RAGA 2XZVA 3EQ2A 1A6QA 4RAFA 2IQ1A 4DS8B 3PU9A 4DA1A 2JFSA 3MQ3A 4YZGA 4N0GA 3ZT9A 3FXKA 3UJLB 3ES2A 3RNRA 3UJKA 2PNQA 3FXMA 2POPA 5D2UA 5F1MA 3KE6A 3ZVUB 4WVOB 3FXOA 2I44A 3JRQA 3F79A 4LGAB 3KB3B 3T91A 1TXOA 3W43A 2IRMA 5JO2B 3RT0A 4LG5B 5ITIA 2JFTA 3W41A 4IIPA 3KDJB 2P8EA 2PK0A 4YZHA 4RA2A 2POMA 2J82A 3W45A 3W42A
chains in the Genus database with same CATH topology
3T9QA 5JO1B 3FXLA 2J86A 3N3CA 3NMNB 2CM1A 2Y09A 3FXJA 3NMTB 3D8KA 2ISNA 3W40A 4LA7B 2I0OA 3QN1B 4LGBB 4OICB 2JFRA 3UJGB 4JNDA 3W44A 2V06A 2J4OA 3NMVB 4RAGA 2XZVA 3EQ2A 1A6QA 4RAFA 2IQ1A 4DS8B 3PU9A 4DA1A 2JFSA 3MQ3A 4YZGA 4N0GA 3ZT9A 3FXKA 3UJLB 3ES2A 3RNRA 3UJKA 2PNQA 3FXMA 2POPA 5D2UA 5F1MA 3KE6A 3ZVUB 4WVOB 3FXOA 2I44A 3JRQA 3F79A 4LGAB 3KB3B 3T91A 1TXOA 3W43A 2IRMA 5JO2B 3RT0A 4LG5B 5ITIA 2JFTA 3W41A 3KDJB 2P8EA 2PK0A 4YZHA 4RA2A 2POMA 2J82A 3W45A 3W42A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3T9Q A;  5JO1 B;  3FXL A;  2J86 A;  3N3C A;  3NMN B;  2CM1 A;  2Y09 A;  3FXJ A;  3NMT B;  3D8K A;  2ISN A;  3W40 A;  4LA7 B;  2I0O A;  3QN1 B;  4LGB B;  4OIC B;  2JFR A;  3UJG B;  4JND A;  3W44 A;  2V06 A;  2J4O A;  3NMV B;  4RAG A;  2XZV A;  3EQ2 A;  1A6Q A;  4RAF A;  2IQ1 A;  4DS8 B;  3PU9 A;  4DA1 A;  2JFS A;  3MQ3 A;  4YZG A;  4N0G A;  3ZT9 A;  3FXK A;  3UJL B;  3ES2 A;  3RNR A;  3UJK A;  2PNQ A;  3FXM A;  2POP A;  5D2U A;  5F1M A;  3KE6 A;  3ZVU B;  4WVO B;  3FXO A;  2I44 A;  3JRQ A;  3F79 A;  4LGA B;  3KB3 B;  3T91 A;  1TXO A;  3W43 A;  2IRM A;  5JO2 B;  3RT0 A;  4LG5 B;  5ITI A;  2JFT A;  3W41 A;  3KDJ B;  2P8E A;  2PK0 A;  4YZH A;  4RA2 A;  2POM A;  2J82 A;  3W45 A;  3W42 A; 
#chains in the Genus database with same CATH topology
 3T9Q A;  5JO1 B;  3FXL A;  2J86 A;  3N3C A;  3NMN B;  2CM1 A;  2Y09 A;  3FXJ A;  3NMT B;  3D8K A;  2ISN A;  3W40 A;  4LA7 B;  2I0O A;  3QN1 B;  4LGB B;  4OIC B;  4IIK A;  2JFR A;  3UJG B;  4JND A;  3W44 A;  2V06 A;  2J4O A;  3NMV B;  4RAG A;  2XZV A;  3EQ2 A;  1A6Q A;  4RAF A;  2IQ1 A;  4DS8 B;  3PU9 A;  4DA1 A;  2JFS A;  3MQ3 A;  4YZG A;  4N0G A;  3ZT9 A;  3FXK A;  3UJL B;  3ES2 A;  3RNR A;  3UJK A;  2PNQ A;  3FXM A;  2POP A;  5D2U A;  5F1M A;  3KE6 A;  3ZVU B;  4WVO B;  3FXO A;  2I44 A;  3JRQ A;  3F79 A;  4LGA B;  3KB3 B;  3T91 A;  1TXO A;  3W43 A;  2IRM A;  5JO2 B;  3RT0 A;  4LG5 B;  5ITI A;  2JFT A;  3W41 A;  4IIP A;  3KDJ B;  2P8E A;  2PK0 A;  4YZH A;  4RA2 A;  2POM A;  2J82 A;  3W45 A;  3W42 A; 
#chains in the Genus database with same CATH homology
 3T9Q A;  5JO1 B;  3FXL A;  2J86 A;  3N3C A;  3NMN B;  2CM1 A;  2Y09 A;  3FXJ A;  3NMT B;  3D8K A;  2ISN A;  3W40 A;  4LA7 B;  2I0O A;  3QN1 B;  4LGB B;  4OIC B;  2JFR A;  3UJG B;  4JND A;  3W44 A;  2V06 A;  2J4O A;  3NMV B;  4RAG A;  2XZV A;  3EQ2 A;  1A6Q A;  4RAF A;  2IQ1 A;  4DS8 B;  3PU9 A;  4DA1 A;  2JFS A;  3MQ3 A;  4YZG A;  4N0G A;  3ZT9 A;  3FXK A;  3UJL B;  3ES2 A;  3RNR A;  3UJK A;  2PNQ A;  3FXM A;  2POP A;  5D2U A;  5F1M A;  3KE6 A;  3ZVU B;  4WVO B;  3FXO A;  2I44 A;  3JRQ A;  3F79 A;  4LGA B;  3KB3 B;  3T91 A;  1TXO A;  3W43 A;  2IRM A;  5JO2 B;  3RT0 A;  4LG5 B;  5ITI A;  2JFT A;  3W41 A;  3KDJ B;  2P8E A;  2PK0 A;  4YZH A;  4RA2 A;  2POM A;  2J82 A;  3W45 A;  3W42 A; 
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