4LUFA

Crystal structure of ovine serum albumin
Total Genus 246
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
246
sequence length
583
structure length
583
Chain Sequence
DTHKSEIAHRFNDLGEENFQGLVLIAFSQYLQQCPFDEHVKLVKELTEFAKTCVADESHAGCDKSLHTLFGDELCKVATLRETYGDMADCCEKQEPERNECFLNHKDDSPDLPKLKPEPDTLCAEFKADEKKFWGKYLYEVARRHPYFYAPELLYYANKYNGVFQECCQAEDKGACLLPKIDAMREKVLASSARQRLRCASIQKFGERALKAWSVARLSQKFPKADFTDVTKIVTDLTKVHKECCHGDLLECADDRADLAKYICDHQDALSSKLKECCDKPVLEKSHCIAEVDKDAVPENLPPLTADFAEDKEVCKNYQEAKDVFLGSFLYEYSRRHPEYAVSVLLRLAKEYEATLEDCCAKEDPHACYATVFDKLKHLVDEPQNLIKKNCELFEKHGEYGFQNALIVRYTRKAPQVSTPTLVEISRSLGKVGTKCCAKPESERMPCTEDYLSLILNRLCVLHEKTPVSEKVTKCCTESLVNRRPCFSDLTLDETYVPKPFDEKFFTFHADICTLPDTEKQIKKQTALVELLKHKPKATDEQLKTVMENFVAFVDKCCAADDKEGCFVLEGPKLVASTQAALA
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Transport protein
molecule keywords Serum albumin
publication title Crystal structure of ovine serum albumin and its complex with 3,5-diiodosalicylic acid
rcsb
total genus 246
structure length 583
sequence length 583
ec nomenclature
pdb deposition date 2013-07-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4lufA03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4lufA02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4lufA04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4lufA01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4lufA06
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4lufA05
4IW2A 2BXLA 1J7EA 4L9KA 5IFOA 4ZBRA 1N5UA 1TF0A 2XVUA 2XVWA 5DQFA 4G03A 4BKEA 5IJEA 4LUFA 5FUOA 4F5VA 3V09A 1BJ5A 4L9QA 1GNJA 3B9MA 2XSIA 1E7AA 4N0FD 4K71A 1HK3A 1AO6A 4E99A 3SQJA 2BXOA 5HOZA 1E7IA 4HGMB 3LU7A 5ID7A 5IJFA 5DBYA 1O9XA 4LB9A 5IIUA 1HK1A 1E7CA 1E7BA 2I2ZA 1HA2A 2BXHA 4OR0A 1UORA 3LU8A 3V03A 2XVVA 4JK4A 2BXAA 2BX8A 2BXEA 4LB2A 4OT2A 3B9LA 1E7HA 4IW1A 2YDFA 5IIHA 4HGKA 1E7EA 2XW1A 3JQZA 2BXQA 3LU6A 5ID9A 4LA0A 2BXKA 2I30A 1BM0A 2BXDA 2BXNA 2BXMA 1HK2A 5IIXA 1HK4A 2BXBA 4J2VA 3TDLA 2BXIA 1LOTA 2BXFA 1GNIA 2XVQA 1E7FA 2VUEA 1MA9A 3CX9A 1H9ZA 3UIVA 1E7GA 1E78A 4LUHA 1HK5A 2VDBA 2XW0A 4F5SA 4F5UA 3V08A 4PO0A 4N0UD 1BKEA 1KW2A 4S1YA 1KXPD 4K2CA 4F5TA 2BXGA 4ZBQA 4EMXA 1J78A 3JRYA 3A73A 4G04A 2BXCA 2VUFA 4Z69A 4L8UA 5IJ5A 5GHKA 2BXPA
chains in the Genus database with same CATH superfamily
3NVKA 3KJLA 4IW2A 4GDLB 1MIYA 1NT2B 3FWCC 3ECPA 2BXLA 2EFHA 2Z8KA 3GA9L 1J7EA 4L9KA 5IFOA 4DHXB 5GIPA 3ICXA 4N3ZA 4ZBRA 1N5UA 1TF0A 2XVUA 2XVWA 5DQFA 4G03A 4BKEA 5IJEA 4LUFA 5FUOA 4F5VA 3V09A 1BJ5A 4L9QA 1GNJA 1JNBA 3B9MA 2XSIA 1E7AA 1VFIA 4N0FD 2NNWA 2DBWA 4K71A 5GIOA 3H3AA 1HK3A 3GQUA 4FK5B 4OTTA 1MIWA 2BXOA 4TQ1A 1E7IA 2EFCA 4HGMB 5HOZA 3SQJA 2ROHA 3LU7A 4FJCB 1MUSA 1IJGA 5ID7A 5IJFA 5DBYA 1FOUA 1O9XA 3FWBC 4LB9A 5IIUA 3BPJA 1HK1A 4OTUA 2NQOA 1E7CA 3WHRA 4C31B 1E7BA 2I2ZA 1HA2A 2BXHA 4OR0A 1UORA 3LU8A 3V03A 1MM8A 2XVVA 1TXUA 4JK4A 2BXAA 4ZCGA 2OT3A 2BX8A 2BXEA 4LB2A 4OT2A 3B9LA 3MHSB 3NMUA 4MBEC 1E7HA 4IW1A 1AO6A 2E0XA 3W1SA 2YDFA 5IIHA 5GINA 4HGKA 2E0YA 5BPKA 3FNMA 4G01A 4W4UB 1E7EA 3WHSA 4ZBKA 2DG5A 2QM6A 2Z8IA 4ZC6A 2XW1A 3JQZA 4I9OA 2BXQA 3KIKA 2KWFA 3LU6A 2EFDA 2DBXA 2GUTA 2LXSA 4ZUXV 4E99A 3NVIA 1VZSA 1H5WA 3GQXA 3PLAA 1MUHA 4M70B 2LQHA 5ID9A 4LA0A 2AGHB 2BXKA 2I30A 1BM0A 2BXDA 2BXNA 2BXMA 4NAWB 1HK2A 4Z9OA 2LXTA 5IIXA 1HK4A 2BXBA 4J2VA 3TDLA 2BXIA 2V36A 1LOTA 2BXFA 1GNIA 1SB0A 3NVMA 2XVQA 1E7FA 2VUEA 1MA9A 3CX9A 1H9ZA 3UIVA 1E7GA 1E78A 3H37A 4GG2A 2K0NA 4LUHA 4WA6B 1HK5A 2JUHA 2VDBA 2XW0A 4D7XA 4F5SA 4F5UA 3V08A 2EFEA 4GDKB 5B5TA 4PO0A 4TQ0A 2QHBA 4N0UD 1BKEA 4DM0A 2CKXA 2XMOA 3SIUB 4GDXA 2OZBB 1KDXA 3M99C 1MIVA 3MHHB 3A75A 1KW2A 4FIPB 2KBZA 4BY9C 4S1YA 1KXPD 2AJEA 4K2CA 4F5TA 2DBUA 2BXGA 3SIVB 2QMCA 5D7GA 4ZBQA 4EMXA 1J78A 3JRYA 2LOQA 3VQIA 3WHQA 3A73A 2DYOA 2DYMA 4G04A 2BXCA 2VUFA 2Z8JA 4L8UA 5IJ5A 4Z69A 1LNSA 3G9KD 2LQIA 5GHKA 2BXPA
chains in the Genus database with same CATH topology
3NVKA 3KJLA 4IW2A 4GDLB 1MIYA 1NT2B 3FWCC 2BXLA 2EFHA 2Z8KA 3GA9L 1J7EA 4L9KA 5IFOA 4DHXB 5GIPA 3ICXA 4N3ZA 4ZBRA 1N5UA 1TF0A 2XVUA 2XVWA 5DQFA 4G03A 4BKEA 5IJEA 4LUFA 5FUOA 4F5VA 3V09A 1BJ5A 4L9QA 1GNJA 1JNBA 3B9MA 2XSIA 1E7AA 1VFIA 4N0FD 2NNWA 2DBWA 4K71A 5GIOA 3H3AA 1HK3A 3GQUA 4FK5B 4OTTA 1MIWA 2BXOA 4TQ1A 1E7IA 2EFCA 4HGMB 5HOZA 3SQJA 2ROHA 3LU7A 4FJCB 1IJGA 5ID7A 5IJFA 5DBYA 1FOUA 1O9XA 3FWBC 4LB9A 5IIUA 1HK1A 4OTUA 2NQOA 1E7CA 3WHRA 4C31B 1E7BA 2I2ZA 1HA2A 2BXHA 4OR0A 1UORA 3LU8A 3V03A 2XVVA 1TXUA 4JK4A 2BXAA 4ZCGA 2OT3A 2BX8A 2BXEA 4LB2A 4OT2A 3B9LA 3MHSB 3NMUA 4MBEC 1E7HA 4IW1A 1AO6A 2E0XA 3W1SA 2YDFA 5IIHA 5GINA 4HGKA 2E0YA 5BPKA 3FNMA 4G01A 4W4UB 1E7EA 3WHSA 4ZBKA 2DG5A 2QM6A 2Z8IA 4ZC6A 2XW1A 3JQZA 2BXQA 3KIKA 3LU6A 2EFDA 2DBXA 4ZUXV 4E99A 3NVIA 1VZSA 1H5WA 3GQXA 3PLAA 4M70B 5ID9A 4LA0A 2BXKA 2I30A 1BM0A 2BXDA 2BXNA 2BXMA 4NAWB 1HK2A 4Z9OA 5IIXA 1HK4A 2BXBA 4J2VA 3TDLA 2BXIA 2V36A 1LOTA 2BXFA 1GNIA 3NVMA 2XVQA 1E7FA 2VUEA 1MA9A 3CX9A 1H9ZA 3UIVA 1E7GA 1E78A 3H37A 4GG2A 4LUHA 4WA6B 1HK5A 2JUHA 2VDBA 2XW0A 4F5SA 4F5UA 3V08A 2EFEA 4GDKB 5B5TA 4PO0A 4TQ0A 2QHBA 4N0UD 1BKEA 2CKXA 2XMOA 3SIUB 4GDXA 2OZBB 3M99C 1MIVA 3MHHB 3A75A 1KW2A 4FIPB 2KBZA 4BY9C 4S1YA 1KXPD 2AJEA 4K2CA 4F5TA 2DBUA 2BXGA 3SIVB 2QMCA 5D7GA 4ZBQA 4EMXA 1J78A 3JRYA 2LOQA 3VQIA 3WHQA 3A73A 2DYOA 2DYMA 4G04A 2BXCA 2VUFA 2Z8JA 4L8UA 5IJ5A 4Z69A 1LNSA 3G9KD 5GHKA 2BXPA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4IW2 A;  2BXL A;  1J7E A;  4L9K A;  5IFO A;  4ZBR A;  1N5U A;  1TF0 A;  2XVU A;  2XVW A;  5DQF A;  4G03 A;  4BKE A;  5IJE A;  4LUF A;  5FUO A;  4F5V A;  3V09 A;  1BJ5 A;  4L9Q A;  1GNJ A;  3B9M A;  2XSI A;  1E7A A;  4N0F D;  4K71 A;  1HK3 A;  1AO6 A;  4E99 A;  3SQJ A;  2BXO A;  5HOZ A;  1E7I A;  4HGM B;  3LU7 A;  5ID7 A;  5IJF A;  5DBY A;  1O9X A;  4LB9 A;  5IIU A;  1HK1 A;  1E7C A;  1E7B A;  2I2Z A;  1HA2 A;  2BXH A;  4OR0 A;  1UOR A;  3LU8 A;  3V03 A;  2XVV A;  4JK4 A;  2BXA A;  2BX8 A;  2BXE A;  4LB2 A;  4OT2 A;  3B9L A;  1E7H A;  4IW1 A;  2YDF A;  5IIH A;  4HGK A;  1E7E A;  2XW1 A;  3JQZ A;  2BXQ A;  3LU6 A;  5ID9 A;  4LA0 A;  2BXK A;  2I30 A;  1BM0 A;  2BXD A;  2BXN A;  2BXM A;  1HK2 A;  5IIX A;  1HK4 A;  2BXB A;  4J2V A;  3TDL A;  2BXI A;  1LOT A;  2BXF A;  1GNI A;  2XVQ A;  1E7F A;  2VUE A;  1MA9 A;  3CX9 A;  1H9Z A;  3UIV A;  1E7G A;  1E78 A;  4LUH A;  1HK5 A;  2VDB A;  2XW0 A;  4F5S A;  4F5U A;  3V08 A;  4PO0 A;  4N0U D;  1BKE A;  1KW2 A;  4S1Y A;  1KXP D;  4K2C A;  4F5T A;  2BXG A;  4ZBQ A;  4EMX A;  1J78 A;  3JRY A;  3A73 A;  4G04 A;  2BXC A;  2VUF A;  4Z69 A;  4L8U A;  5IJ5 A;  5GHK A;  2BXP A; 
#chains in the Genus database with same CATH topology
 3NVK A;  3KJL A;  4IW2 A;  4GDL B;  1MIY A;  1NT2 B;  3FWC C;  3ECP A;  2BXL A;  2EFH A;  2Z8K A;  3GA9 L;  1J7E A;  4L9K A;  5IFO A;  4DHX B;  5GIP A;  3ICX A;  4N3Z A;  4ZBR A;  1N5U A;  1TF0 A;  2XVU A;  2XVW A;  5DQF A;  4G03 A;  4BKE A;  5IJE A;  4LUF A;  5FUO A;  4F5V A;  3V09 A;  1BJ5 A;  4L9Q A;  1GNJ A;  1JNB A;  3B9M A;  2XSI A;  1E7A A;  1VFI A;  4N0F D;  2NNW A;  2DBW A;  4K71 A;  5GIO A;  3H3A A;  1HK3 A;  3GQU A;  4FK5 B;  4OTT A;  1MIW A;  2BXO A;  4TQ1 A;  1E7I A;  2EFC A;  4HGM B;  5HOZ A;  3SQJ A;  2ROH A;  3LU7 A;  4FJC B;  1MUS A;  1IJG A;  5ID7 A;  5IJF A;  5DBY A;  1FOU A;  1O9X A;  3FWB C;  4LB9 A;  5IIU A;  3BPJ A;  1HK1 A;  4OTU A;  2NQO A;  1E7C A;  3WHR A;  4C31 B;  1E7B A;  2I2Z A;  1HA2 A;  2BXH A;  4OR0 A;  1UOR A;  3LU8 A;  3V03 A;  1MM8 A;  2XVV A;  1TXU A;  4JK4 A;  2BXA A;  4ZCG A;  2OT3 A;  2BX8 A;  2BXE A;  4LB2 A;  4OT2 A;  3B9L A;  3MHS B;  3NMU A;  4MBE C;  1E7H A;  4IW1 A;  1AO6 A;  2E0X A;  3W1S A;  2YDF A;  5IIH A;  5GIN A;  4HGK A;  2E0Y A;  5BPK A;  3FNM A;  4G01 A;  4W4U B;  1E7E A;  3WHS A;  4ZBK A;  2DG5 A;  2QM6 A;  2Z8I A;  4ZC6 A;  2XW1 A;  3JQZ A;  4I9O A;  2BXQ A;  3KIK A;  2KWF A;  3LU6 A;  2EFD A;  2DBX A;  2GUT A;  2LXS A;  4ZUX V;  4E99 A;  3NVI A;  1VZS A;  1H5W A;  3GQX A;  3PLA A;  1MUH A;  4M70 B;  2LQH A;  5ID9 A;  4LA0 A;  2AGH B;  2BXK A;  2I30 A;  1BM0 A;  2BXD A;  2BXN A;  2BXM A;  4NAW B;  1HK2 A;  4Z9O A;  2LXT A;  5IIX A;  1HK4 A;  2BXB A;  4J2V A;  3TDL A;  2BXI A;  2V36 A;  1LOT A;  2BXF A;  1GNI A;  1SB0 A;  3NVM A;  2XVQ A;  1E7F A;  2VUE A;  1MA9 A;  3CX9 A;  1H9Z A;  3UIV A;  1E7G A;  1E78 A;  3H37 A;  4GG2 A;  2K0N A;  4LUH A;  4WA6 B;  1HK5 A;  2JUH A;  2VDB A;  2XW0 A;  4D7X A;  4F5S A;  4F5U A;  3V08 A;  2EFE A;  4GDK B;  5B5T A;  4PO0 A;  4TQ0 A;  2QHB A;  4N0U D;  1BKE A;  4DM0 A;  2CKX A;  2XMO A;  3SIU B;  4GDX A;  2OZB B;  1KDX A;  3M99 C;  1MIV A;  3MHH B;  3A75 A;  1KW2 A;  4FIP B;  2KBZ A;  4BY9 C;  4S1Y A;  1KXP D;  2AJE A;  4K2C A;  4F5T A;  2DBU A;  2BXG A;  3SIV B;  2QMC A;  5D7G A;  4ZBQ A;  4EMX A;  1J78 A;  3JRY A;  2LOQ A;  3VQI A;  3WHQ A;  3A73 A;  2DYO A;  2DYM A;  4G04 A;  2BXC A;  2VUF A;  2Z8J A;  4L8U A;  5IJ5 A;  4Z69 A;  1LNS A;  3G9K D;  2LQI A;  5GHK A;  2BXP A; 
#chains in the Genus database with same CATH homology
 3NVK A;  3KJL A;  4IW2 A;  4GDL B;  1MIY A;  1NT2 B;  3FWC C;  2BXL A;  2EFH A;  2Z8K A;  3GA9 L;  1J7E A;  4L9K A;  5IFO A;  4DHX B;  5GIP A;  3ICX A;  4N3Z A;  4ZBR A;  1N5U A;  1TF0 A;  2XVU A;  2XVW A;  5DQF A;  4G03 A;  4BKE A;  5IJE A;  4LUF A;  5FUO A;  4F5V A;  3V09 A;  1BJ5 A;  4L9Q A;  1GNJ A;  1JNB A;  3B9M A;  2XSI A;  1E7A A;  1VFI A;  4N0F D;  2NNW A;  2DBW A;  4K71 A;  5GIO A;  3H3A A;  1HK3 A;  3GQU A;  4FK5 B;  4OTT A;  1MIW A;  2BXO A;  4TQ1 A;  1E7I A;  2EFC A;  4HGM B;  5HOZ A;  3SQJ A;  2ROH A;  3LU7 A;  4FJC B;  1IJG A;  5ID7 A;  5IJF A;  5DBY A;  1FOU A;  1O9X A;  3FWB C;  4LB9 A;  5IIU A;  1HK1 A;  4OTU A;  2NQO A;  1E7C A;  3WHR A;  4C31 B;  1E7B A;  2I2Z A;  1HA2 A;  2BXH A;  4OR0 A;  1UOR A;  3LU8 A;  3V03 A;  2XVV A;  1TXU A;  4JK4 A;  2BXA A;  4ZCG A;  2OT3 A;  2BX8 A;  2BXE A;  4LB2 A;  4OT2 A;  3B9L A;  3MHS B;  3NMU A;  4MBE C;  1E7H A;  4IW1 A;  1AO6 A;  2E0X A;  3W1S A;  2YDF A;  5IIH A;  5GIN A;  4HGK A;  2E0Y A;  5BPK A;  3FNM A;  4G01 A;  4W4U B;  1E7E A;  3WHS A;  4ZBK A;  2DG5 A;  2QM6 A;  2Z8I A;  4ZC6 A;  2XW1 A;  3JQZ A;  2BXQ A;  3KIK A;  3LU6 A;  2EFD A;  2DBX A;  4ZUX V;  4E99 A;  3NVI A;  1VZS A;  1H5W A;  3GQX A;  3PLA A;  4M70 B;  5ID9 A;  4LA0 A;  2BXK A;  2I30 A;  1BM0 A;  2BXD A;  2BXN A;  2BXM A;  4NAW B;  1HK2 A;  4Z9O A;  5IIX A;  1HK4 A;  2BXB A;  4J2V A;  3TDL A;  2BXI A;  2V36 A;  1LOT A;  2BXF A;  1GNI A;  3NVM A;  2XVQ A;  1E7F A;  2VUE A;  1MA9 A;  3CX9 A;  1H9Z A;  3UIV A;  1E7G A;  1E78 A;  3H37 A;  4GG2 A;  4LUH A;  4WA6 B;  1HK5 A;  2JUH A;  2VDB A;  2XW0 A;  4F5S A;  4F5U A;  3V08 A;  2EFE A;  4GDK B;  5B5T A;  4PO0 A;  4TQ0 A;  2QHB A;  4N0U D;  1BKE A;  2CKX A;  2XMO A;  3SIU B;  4GDX A;  2OZB B;  3M99 C;  1MIV A;  3MHH B;  3A75 A;  1KW2 A;  4FIP B;  2KBZ A;  4BY9 C;  4S1Y A;  1KXP D;  2AJE A;  4K2C A;  4F5T A;  2DBU A;  2BXG A;  3SIV B;  2QMC A;  5D7G A;  4ZBQ A;  4EMX A;  1J78 A;  3JRY A;  2LOQ A;  3VQI A;  3WHQ A;  3A73 A;  2DYO A;  2DYM A;  4G04 A;  2BXC A;  2VUF A;  2Z8J A;  4L8U A;  5IJ5 A;  4Z69 A;  1LNS A;  3G9K D;  5GHK A;  2BXP A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...