4MAHA

Structure of aspergillus oryzae aa11 lytic polysaccharide monooxygenase with zn
Total Genus 44
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
44
sequence length
216
structure length
186
Chain Sequence
HMMMAQPVPYGKDTLNNSPLAADGSDFPCKLRSNTYQVTEENTAAIGQSMPLSFIGSAVHGGGSCQVSLTTDREPTKDSKWIVIKSIEGGCPANVDGNKFTYTIPEGIEPGKYTLAWTWFNRIGNREMYMNCAPLTVTGNFPPMFVANVNGCTTKEGVDIRFPNPGSIVEYAGDKSNLAAEGSQAC
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Oxidoreductase
molecule keywords AA11 Lytic Polysaccharide Monooxygenase
publication title Discovery and characterization of a new family of lytic polysaccharide monooxygenases.
pubmed doi rcsb
source organism Aspergillus oryzae
total genus 44
structure length 186
sequence length 216
ec nomenclature ec 1.14.-.-:
pdb deposition date 2013-08-16
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.50.70 Mainly Beta Distorted Sandwich Coagulation Factor XIII; Chain A, domain 1 Coagulation Factor XIII; Chain A, domain 1 4mahA00
4EISB 2VTCA 3EIIA 4D7UA 4D7VA 5ACIA 5ACJA 4EIRA 4MAIA 5ACHA 5ACFA 4B5QA 4MAHA 3EJAA 4EISA 2YETA 3ZUDA 4QI8A 5FOHA 5ACGA 4FMRA
chains in the Genus database with same CATH superfamily
4EISB 4RE1A 2BENA 5EMVA 3EIIA 5EMWA 4GBOA 2LHSA 2JHYA 2YOWA 2JHUA 5TB5B 1GDFA 4ALTA 1FSTA 2JHXA 1KSGB 4JV6B 2JHSA 3KYSA 4JHPB 1KSJB 4LN0A 4QI8A 2JI0A 1DS6B 4ALQA 4FMRA 2VTCA 4OY6A 2JHZA 4ALSA 2XWXA 5HGUA 3GQQA 1KMTA 3RBQA 5HNOA 5ACJA 4MAIA 5DQEA 4MAHA 2BXWA 5FJQA 4GOJC 5E80A 3UAMA 1AJWA 2R5OA 5IJUA 5ACHA 4GOKC 4JVFB 3JUAA 3T5IA 5TARB 4D7UA 5F2UA 5FTZA 1KSHB 3T5GB 4JV8B 5ACFA 4B5QA 3ZUDA 1DOAB 4A02A 5DQ8A 5FOHA 5ACGA 2YOYA 1FT0A 1FT3A 4OY7A 4ALEA 2JHVA 1RHOA 5L7KA 3L15A 4ALCA 4OY8A 1HH4D 5ACIA 4JVBB 4ALRA 4EIRA 1FSOA 2JHWA 2YETA 3EJAA 4EISA 5E8FA 2BEMA 2YOXA 4F38B 1QVYA 5AA7A 2JHTA 5HNPA 4D7VA
chains in the Genus database with same CATH topology
4EISB 4RE1A 2VTCA 5EMVA 3EIIA 3L15A 5EMWA 3JUAA 5HGUA 4D7UA 5ACIA 5ACJA 4EIRA 5ACGA 4MAIA 5ACHA 5DQEA 4B5QA 5ACFA 4MAHA 3EJAA 2YETA 4EISA 3ZUDA 3KYSA 4LN0A 4QI8A 5DQ8A 5FOHA 4D7VA 4FMRA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4EIS B;  2VTC A;  3EII A;  4D7U A;  4D7V A;  5ACI A;  5ACJ A;  4EIR A;  4MAI A;  5ACH A;  5ACF A;  4B5Q A;  4MAH A;  3EJA A;  4EIS A;  2YET A;  3ZUD A;  4QI8 A;  5FOH A;  5ACG A;  4FMR A; 
#chains in the Genus database with same CATH topology
 4EIS B;  4RE1 A;  2BEN A;  5EMV A;  3EII A;  5EMW A;  4GBO A;  2LHS A;  2JHY A;  2YOW A;  2JHU A;  5TB5 B;  1GDF A;  4ALT A;  1FST A;  2JHX A;  1KSG B;  4JV6 B;  2JHS A;  3KYS A;  4JHP B;  1KSJ B;  4LN0 A;  4QI8 A;  2JI0 A;  1DS6 B;  4ALQ A;  4FMR A;  2VTC A;  4OY6 A;  2JHZ A;  4ALS A;  2XWX A;  5HGU A;  3GQQ A;  1KMT A;  3RBQ A;  5HNO A;  5ACJ A;  4MAI A;  5DQE A;  4MAH A;  2BXW A;  5FJQ A;  4GOJ C;  5E80 A;  3UAM A;  1AJW A;  2R5O A;  5IJU A;  5ACH A;  4GOK C;  4JVF B;  3JUA A;  3T5I A;  5TAR B;  4D7U A;  5F2U A;  5FTZ A;  1KSH B;  3T5G B;  4JV8 B;  5ACF A;  4B5Q A;  3ZUD A;  1DOA B;  4A02 A;  5DQ8 A;  5FOH A;  5ACG A;  2YOY A;  1FT0 A;  1FT3 A;  4OY7 A;  4ALE A;  2JHV A;  1RHO A;  5L7K A;  3L15 A;  4ALC A;  4OY8 A;  1HH4 D;  5ACI A;  4JVB B;  4ALR A;  4EIR A;  1FSO A;  2JHW A;  2YET A;  3EJA A;  4EIS A;  5E8F A;  2BEM A;  2YOX A;  4F38 B;  1QVY A;  5AA7 A;  2JHT A;  5HNP A;  4D7V A; 
#chains in the Genus database with same CATH homology
 4EIS B;  4RE1 A;  2VTC A;  5EMV A;  3EII A;  3L15 A;  5EMW A;  3JUA A;  5HGU A;  4D7U A;  5ACI A;  5ACJ A;  4EIR A;  5ACG A;  4MAI A;  5ACH A;  5DQE A;  4B5Q A;  5ACF A;  4MAH A;  3EJA A;  2YET A;  4EIS A;  3ZUD A;  3KYS A;  4LN0 A;  4QI8 A;  5DQ8 A;  5FOH A;  4D7V A;  4FMR A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...