4MIDA

Crystal structure of activin a/bmp2 chimera
Total Genus 17
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
17
sequence length
105
structure length
105
Chain Sequence
LKSSCKRHPLYVDFSDVGWNDWIIAPSGYHANYCDGECPFPLADHLNSTNHAIVQTLVNSVNSKIPKACCVPTKLRPMSMLYYDDGQNIIKKDIQNMIVEECGCS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Cytokine
molecule keywords AB204 Activin A/BMP2 chimera
publication title An Activin A/BMP2 Chimera, AB204, Displays Bone-Healing Properties Superior to Those of BMP2.
pubmed doi rcsb
source organism Homo sapiens
total genus 17
structure length 105
sequence length 105
ec nomenclature
pdb deposition date 2013-08-30
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.90.10 Mainly Beta Ribbon Cystine Knot Cytokines, subunit B Cystine-knot cytokines 4midA00
1MJVA 2X1XE 1HCNB 2QCWA 4EFVA 5HK5A 4UI1A 1REUA 2H62A 3MJGA 4BV4L 4QAFC 4LXSJ 2PJYA 4MIDA 4MQWA 1WQ9A 2KD3A 4HQUA 1B8MB 2ASKA 1QFWB 2X1WA 3KFDA 1DZ7A 2GYRA 4EC7A 4KXZA 1LXIA 1VPPV 2VPFA 5HHCA 2R53A 1B8MA 4KZNA 1QFWA 2QJAA 5BQBA 2GNNA 5HK5E 1WAQA 4UHYA 2XV7A 4GLSE 5BQ8B 5HHVA 4LXRJ 1TFGA 4ZBNA 1AOCA 1BETA 2GH0C 1QTYR 4YCIC 1S4YB 5BQ8D 4UI2B 1MKGA 5BQ8A 4N1DA 4FAOA 5HI4A 3IJ2A 5BQEB 3HH2A 1HCNA 1AGQA 1VPFA 1TZHV 1ES7A 1REWA 3BMPA 3P9WA 2B0UA 3BUKA 3S1KV 1BMPA 3SEKB 2VWEA 4XPJA 1E9JA 3E07A 1BNDB 1FL7B 1HRPB 3EVSB 2ARPA 2TGIA 4AY9B 2QR0C 4GLNE 3BK3A 3BDYV 3QTKA 4MPLA 2VXSA 2FJGV 3QB4A 4UI0A 4YCGC 1FL7A 1KLCA 3B4VA 5JZ7A 1HRPA 1MKKA 1FZVA 5F3BC 1B98A 4HSAA 1LX5A 1RV6V 1BJ1V 1BTGA 2ARVA 4AY9A 1NT3A 2QJBA 4QHUC 3S1BV 1SG1A 1TGKA 1B8KA 5FV2V 3MJKA 5BPUA 4KV5A 4EAXA 1XWDB 4EDXV 3FUBB 1NYUB 4EDWV 5BQCA 3RJRA 4WPBA 1WQ9B 2BHKA 5AEJA 1CZ8V 5F3HI 5BQEA 1JPYA 1KLAA 1TGJA 2P6AA 2V5EB 1PDGA 3JVFA 5HI5A 2QCQA 1XWDA 2IFGE 1HD4A 5FV1V 4ZFFC 1WQ8A 5E4GA 2C7WA 4QCIC 1HCFA 1SGFB 5HHXA 1BNDA 5HHDA 1WWWV 1FLTV 4HR9A 2FJHV 1NYSB 4X1JA 1KTZA 1M4UL 2GOOA 1KATW 2GYZA 1M4UA 1TZIV 3EO1C 5HI3A 3V6BA 4UHZA 3V2AA 2QJ9A 4HQXA 2R52A 1ZKZA 2H64A 4MQWB 2XACA
chains in the Genus database with same CATH superfamily
1MJVA 2X1XE 1HCNB 2QCWA 4EFVA 5HK5A 4UI1A 1REUA 2H62A 3MJGA 4BV4L 4QAFC 4LXSJ 2PJYA 4MIDA 4MQWA 1WQ9A 2KD3A 4HQUA 1B8MB 2ASKA 1QFWB 2X1WA 3KFDA 1DZ7A 2GYRA 4EC7A 4KXZA 1LXIA 1VPPV 2VPFA 5HHCA 2R53A 1B8MA 4KZNA 1QFWA 2QJAA 5BQBA 2GNNA 5HK5E 1WAQA 4UHYA 2XV7A 4GLSE 5BQ8B 5HHVA 4LXRJ 1TFGA 4ZBNA 1AOCA 1BETA 2GH0C 1QTYR 4YCIC 1S4YB 5BQ8D 4UI2B 1MKGA 5BQ8A 4N1DA 4FAOA 5HI4A 3IJ2A 5BQEB 3HH2A 1HCNA 1AGQA 1VPFA 1TZHV 1ES7A 1REWA 3BMPA 3P9WA 2B0UA 3BUKA 3S1KV 1BMPA 3SEKB 2VWEA 4XPJA 1E9JA 3E07A 1BNDB 1FL7B 1HRPB 3EVSB 2ARPA 2TGIA 4AY9B 2QR0C 4GLNE 3BK3A 3BDYV 3QTKA 4MPLA 2VXSA 2FJGV 3QB4A 4UI0A 4YCGC 1FL7A 1KLCA 3B4VA 5JZ7A 1HRPA 1MKKA 1FZVA 5F3BC 1B98A 4HSAA 1LX5A 1RV6V 1BJ1V 1BTGA 2ARVA 4AY9A 1NT3A 2QJBA 4QHUC 3S1BV 1SG1A 1TGKA 1B8KA 5FV2V 3MJKA 5BPUA 4KV5A 4EAXA 1XWDB 4EDXV 3FUBB 1NYUB 4EDWV 5BQCA 3RJRA 4WPBA 1WQ9B 2BHKA 5AEJA 1CZ8V 5F3HI 5BQEA 1JPYA 1KLAA 1TGJA 2P6AA 2V5EB 1PDGA 3JVFA 5HI5A 2QCQA 1XWDA 2IFGE 1HD4A 5FV1V 4ZFFC 1WQ8A 5E4GA 2C7WA 4QCIC 1HCFA 1SGFB 5HHXA 1BNDA 5HHDA 1WWWV 1FLTV 4HR9A 2FJHV 1NYSB 4X1JA 1KTZA 1M4UL 2GOOA 1KATW 2GYZA 1M4UA 1TZIV 3EO1C 5HI3A 3V6BA 4UHZA 3V2AA 2QJ9A 4HQXA 2R52A 1ZKZA 2H64A 4MQWB 2XACA
chains in the Genus database with same CATH topology
1MJVA 2X1XE 1HCNB 2QCWA 4EFVA 5HK5A 4UI1A 1REUA 2H62A 3MJGA 4BV4L 4QAFC 4LXSJ 2PJYA 4MIDA 4MQWA 1WQ9A 2KD3A 4HQUA 1B8MB 2ASKA 1QFWB 2X1WA 3KFDA 1DZ7A 2GYRA 4EC7A 4KXZA 1LXIA 1VPPV 2VPFA 5HHCA 2R53A 1B8MA 4KZNA 1QFWA 2QJAA 5BQBA 2GNNA 5HK5E 1WAQA 4UHYA 2XV7A 4GLSE 5BQ8B 5HHVA 4LXRJ 1TFGA 4ZBNA 1AOCA 1BETA 2GH0C 1QTYR 4YCIC 1S4YB 5BQ8D 4UI2B 1MKGA 5BQ8A 4N1DA 4FAOA 5HI4A 3IJ2A 5BQEB 3HH2A 1HCNA 1AGQA 1VPFA 1TZHV 1ES7A 1REWA 3BMPA 3P9WA 2B0UA 3BUKA 3S1KV 1BMPA 3SEKB 2VWEA 4XPJA 1E9JA 3E07A 1BNDB 1FL7B 1HRPB 3EVSB 2ARPA 2TGIA 4AY9B 2QR0C 4GLNE 3BK3A 3BDYV 3QTKA 4MPLA 2VXSA 2FJGV 3QB4A 4UI0A 4YCGC 1FL7A 1KLCA 3B4VA 5JZ7A 1HRPA 1MKKA 1FZVA 5F3BC 1B98A 4HSAA 1LX5A 1RV6V 1BJ1V 1BTGA 2ARVA 4AY9A 1NT3A 2QJBA 4QHUC 3S1BV 1SG1A 1TGKA 1B8KA 5FV2V 3MJKA 5BPUA 4KV5A 4EAXA 1XWDB 4EDXV 3FUBB 1NYUB 4EDWV 5BQCA 3RJRA 4WPBA 1WQ9B 2BHKA 5AEJA 1CZ8V 5F3HI 5BQEA 1JPYA 1KLAA 1TGJA 2P6AA 2V5EB 1PDGA 3JVFA 5HI5A 2QCQA 1XWDA 2IFGE 1HD4A 5FV1V 4ZFFC 1WQ8A 5E4GA 2C7WA 4QCIC 1HCFA 1SGFB 5HHXA 1BNDA 5HHDA 1WWWV 1FLTV 4HR9A 2FJHV 1NYSB 4X1JA 1KTZA 1M4UL 2GOOA 1KATW 2GYZA 1M4UA 1TZIV 3EO1C 5HI3A 3V6BA 4UHZA 3V2AA 2QJ9A 4HQXA 2R52A 1ZKZA 2H64A 4MQWB 2XACA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1MJV A;  2X1X E;  1HCN B;  2QCW A;  4EFV A;  5HK5 A;  4UI1 A;  1REU A;  2H62 A;  3MJG A;  4BV4 L;  4QAF C;  4LXS J;  2PJY A;  4MID A;  4MQW A;  1WQ9 A;  2KD3 A;  4HQU A;  1B8M B;  2ASK A;  1QFW B;  2X1W A;  3KFD A;  1DZ7 A;  2GYR A;  4EC7 A;  4KXZ A;  1LXI A;  1VPP V;  2VPF A;  5HHC A;  2R53 A;  1B8M A;  4KZN A;  1QFW A;  2QJA A;  5BQB A;  2GNN A;  5HK5 E;  1WAQ A;  4UHY A;  2XV7 A;  4GLS E;  5BQ8 B;  5HHV A;  4LXR J;  1TFG A;  4ZBN A;  1AOC A;  1BET A;  2GH0 C;  1QTY R;  4YCI C;  1S4Y B;  5BQ8 D;  4UI2 B;  1MKG A;  5BQ8 A;  4N1D A;  4FAO A;  5HI4 A;  3IJ2 A;  5BQE B;  3HH2 A;  1HCN A;  1AGQ A;  1VPF A;  1TZH V;  1ES7 A;  1REW A;  3BMP A;  3P9W A;  2B0U A;  3BUK A;  3S1K V;  1BMP A;  3SEK B;  2VWE A;  4XPJ A;  1E9J A;  3E07 A;  1BND B;  1FL7 B;  1HRP B;  3EVS B;  2ARP A;  2TGI A;  4AY9 B;  2QR0 C;  4GLN E;  3BK3 A;  3BDY V;  3QTK A;  4MPL A;  2VXS A;  2FJG V;  3QB4 A;  4UI0 A;  4YCG C;  1FL7 A;  1KLC A;  3B4V A;  5JZ7 A;  1HRP A;  1MKK A;  1FZV A;  5F3B C;  1B98 A;  4HSA A;  1LX5 A;  1RV6 V;  1BJ1 V;  1BTG A;  2ARV A;  4AY9 A;  1NT3 A;  2QJB A;  4QHU C;  3S1B V;  1SG1 A;  1TGK A;  1B8K A;  5FV2 V;  3MJK A;  5BPU A;  4KV5 A;  4EAX A;  1XWD B;  4EDX V;  3FUB B;  1NYU B;  4EDW V;  5BQC A;  3RJR A;  4WPB A;  1WQ9 B;  2BHK A;  5AEJ A;  1CZ8 V;  5F3H I;  5BQE A;  1JPY A;  1KLA A;  1TGJ A;  2P6A A;  2V5E B;  1PDG A;  3JVF A;  5HI5 A;  2QCQ A;  1XWD A;  2IFG E;  1HD4 A;  5FV1 V;  4ZFF C;  1WQ8 A;  5E4G A;  2C7W A;  4QCI C;  1HCF A;  1SGF B;  5HHX A;  1BND A;  5HHD A;  1WWW V;  1FLT V;  4HR9 A;  2FJH V;  1NYS B;  4X1J A;  1KTZ A;  1M4U L;  2GOO A;  1KAT W;  2GYZ A;  1M4U A;  1TZI V;  3EO1 C;  5HI3 A;  3V6B A;  4UHZ A;  3V2A A;  2QJ9 A;  4HQX A;  2R52 A;  1ZKZ A;  2H64 A;  4MQW B;  2XAC A; 
#chains in the Genus database with same CATH topology
 1MJV A;  2X1X E;  1HCN B;  2QCW A;  4EFV A;  5HK5 A;  4UI1 A;  1REU A;  2H62 A;  3MJG A;  4BV4 L;  4QAF C;  4LXS J;  2PJY A;  4MID A;  4MQW A;  1WQ9 A;  2KD3 A;  4HQU A;  1B8M B;  2ASK A;  1QFW B;  2X1W A;  3KFD A;  1DZ7 A;  2GYR A;  4EC7 A;  4KXZ A;  1LXI A;  1VPP V;  2VPF A;  5HHC A;  2R53 A;  1B8M A;  4KZN A;  1QFW A;  2QJA A;  5BQB A;  2GNN A;  5HK5 E;  1WAQ A;  4UHY A;  2XV7 A;  4GLS E;  5BQ8 B;  5HHV A;  4LXR J;  1TFG A;  4ZBN A;  1AOC A;  1BET A;  2GH0 C;  1QTY R;  4YCI C;  1S4Y B;  5BQ8 D;  4UI2 B;  1MKG A;  5BQ8 A;  4N1D A;  4FAO A;  5HI4 A;  3IJ2 A;  5BQE B;  3HH2 A;  1HCN A;  1AGQ A;  1VPF A;  1TZH V;  1ES7 A;  1REW A;  3BMP A;  3P9W A;  2B0U A;  3BUK A;  3S1K V;  1BMP A;  3SEK B;  2VWE A;  4XPJ A;  1E9J A;  3E07 A;  1BND B;  1FL7 B;  1HRP B;  3EVS B;  2ARP A;  2TGI A;  4AY9 B;  2QR0 C;  4GLN E;  3BK3 A;  3BDY V;  3QTK A;  4MPL A;  2VXS A;  2FJG V;  3QB4 A;  4UI0 A;  4YCG C;  1FL7 A;  1KLC A;  3B4V A;  5JZ7 A;  1HRP A;  1MKK A;  1FZV A;  5F3B C;  1B98 A;  4HSA A;  1LX5 A;  1RV6 V;  1BJ1 V;  1BTG A;  2ARV A;  4AY9 A;  1NT3 A;  2QJB A;  4QHU C;  3S1B V;  1SG1 A;  1TGK A;  1B8K A;  5FV2 V;  3MJK A;  5BPU A;  4KV5 A;  4EAX A;  1XWD B;  4EDX V;  3FUB B;  1NYU B;  4EDW V;  5BQC A;  3RJR A;  4WPB A;  1WQ9 B;  2BHK A;  5AEJ A;  1CZ8 V;  5F3H I;  5BQE A;  1JPY A;  1KLA A;  1TGJ A;  2P6A A;  2V5E B;  1PDG A;  3JVF A;  5HI5 A;  2QCQ A;  1XWD A;  2IFG E;  1HD4 A;  5FV1 V;  4ZFF C;  1WQ8 A;  5E4G A;  2C7W A;  4QCI C;  1HCF A;  1SGF B;  5HHX A;  1BND A;  5HHD A;  1WWW V;  1FLT V;  4HR9 A;  2FJH V;  1NYS B;  4X1J A;  1KTZ A;  1M4U L;  2GOO A;  1KAT W;  2GYZ A;  1M4U A;  1TZI V;  3EO1 C;  5HI3 A;  3V6B A;  4UHZ A;  3V2A A;  2QJ9 A;  4HQX A;  2R52 A;  1ZKZ A;  2H64 A;  4MQW B;  2XAC A; 
#chains in the Genus database with same CATH homology
 1MJV A;  2X1X E;  1HCN B;  2QCW A;  4EFV A;  5HK5 A;  4UI1 A;  1REU A;  2H62 A;  3MJG A;  4BV4 L;  4QAF C;  4LXS J;  2PJY A;  4MID A;  4MQW A;  1WQ9 A;  2KD3 A;  4HQU A;  1B8M B;  2ASK A;  1QFW B;  2X1W A;  3KFD A;  1DZ7 A;  2GYR A;  4EC7 A;  4KXZ A;  1LXI A;  1VPP V;  2VPF A;  5HHC A;  2R53 A;  1B8M A;  4KZN A;  1QFW A;  2QJA A;  5BQB A;  2GNN A;  5HK5 E;  1WAQ A;  4UHY A;  2XV7 A;  4GLS E;  5BQ8 B;  5HHV A;  4LXR J;  1TFG A;  4ZBN A;  1AOC A;  1BET A;  2GH0 C;  1QTY R;  4YCI C;  1S4Y B;  5BQ8 D;  4UI2 B;  1MKG A;  5BQ8 A;  4N1D A;  4FAO A;  5HI4 A;  3IJ2 A;  5BQE B;  3HH2 A;  1HCN A;  1AGQ A;  1VPF A;  1TZH V;  1ES7 A;  1REW A;  3BMP A;  3P9W A;  2B0U A;  3BUK A;  3S1K V;  1BMP A;  3SEK B;  2VWE A;  4XPJ A;  1E9J A;  3E07 A;  1BND B;  1FL7 B;  1HRP B;  3EVS B;  2ARP A;  2TGI A;  4AY9 B;  2QR0 C;  4GLN E;  3BK3 A;  3BDY V;  3QTK A;  4MPL A;  2VXS A;  2FJG V;  3QB4 A;  4UI0 A;  4YCG C;  1FL7 A;  1KLC A;  3B4V A;  5JZ7 A;  1HRP A;  1MKK A;  1FZV A;  5F3B C;  1B98 A;  4HSA A;  1LX5 A;  1RV6 V;  1BJ1 V;  1BTG A;  2ARV A;  4AY9 A;  1NT3 A;  2QJB A;  4QHU C;  3S1B V;  1SG1 A;  1TGK A;  1B8K A;  5FV2 V;  3MJK A;  5BPU A;  4KV5 A;  4EAX A;  1XWD B;  4EDX V;  3FUB B;  1NYU B;  4EDW V;  5BQC A;  3RJR A;  4WPB A;  1WQ9 B;  2BHK A;  5AEJ A;  1CZ8 V;  5F3H I;  5BQE A;  1JPY A;  1KLA A;  1TGJ A;  2P6A A;  2V5E B;  1PDG A;  3JVF A;  5HI5 A;  2QCQ A;  1XWD A;  2IFG E;  1HD4 A;  5FV1 V;  4ZFF C;  1WQ8 A;  5E4G A;  2C7W A;  4QCI C;  1HCF A;  1SGF B;  5HHX A;  1BND A;  5HHD A;  1WWW V;  1FLT V;  4HR9 A;  2FJH V;  1NYS B;  4X1J A;  1KTZ A;  1M4U L;  2GOO A;  1KAT W;  2GYZ A;  1M4U A;  1TZI V;  3EO1 C;  5HI3 A;  3V6B A;  4UHZ A;  3V2A A;  2QJ9 A;  4HQX A;  2R52 A;  1ZKZ A;  2H64 A;  4MQW B;  2XAC A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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