4MOYA

Structure of a second nuclear pp1 holoenzyme, crystal form 1
Total Genus 112
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
112
sequence length
294
structure length
294
Chain Sequence
LNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase/nuclear protein
molecule keywords Serine/threonine-protein phosphatase PP1-alpha catalytic sub
publication title Understanding the antagonism of retinoblastoma protein dephosphorylation by PNUTS provides insights into the PP1 regulatory code.
pubmed doi rcsb
source organism Homo sapiens
total genus 112
structure length 294
sequence length 294
ec nomenclature ec 3.1.3.16: Protein-serine/threonine phosphatase.
pdb deposition date 2013-09-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00149 Metallophos Calcineurin-like phosphoesterase
A PF16891 STPPase_N Serine-threonine protein phosphatase N-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 4moyA00
4I5LC 5F3WA 1OI8A 1T70A 4H2GA 4TUIA 3AUZA 1T71A 2O8GA 3QG5C 4UT3A 2IAEC 3QFNA 4MP0A 1S8EA 5JPFA 1S3MA 4HD0A 1HPUA 4LACC 2QJCA 4O4KA 4Q7FA 1S95A 1XM7A 3E7AA 3N5UA 2HYPA 5C1VA 2WDEA 5J28A 2NPPC 2XMOA 3THNA 2JOGA 4UT3B 3QFMA 3EGHA 2NYLC 4J6OA 1G5BA 4YKEA 4G9JA 4FCXA 1QFCA 3K7WC 2GJUA 4FBWA 3DSDA 4O43A 3KBPA 3IB7A 2Z72A 4FBKA 5JJTA 4H1YP 3H61A 2KKNA 3LL8A 3H60A 1MF8A 2HYOA 1FJMA 3THOB 3H66A 1V73A 5INBA 3P71C 3AV0A 3C9FA 4H2BA 4IL1A 4FBQA 4I5NC 4O24A 4LU9A 1HO5A 2NXFA 2Z1AA 4O5GA 2WDCA 4OR9A 4F0ZA 4XPNA 3H63A 3PSOA 3EGGA 1M63A 1KBPA 4ORCA 2QFPA 5IOHA 4JA7A 2BCDA 3GVEA 2IE3C 4V0XA 3IVDA 4H2IA 2A22A 3H69A 3PSNA 4DHLA 2WDDA 4H2FA 2BQ8X 3RL3A 2IE4C 3K7VC 5B8IA 1Z2XA 2DFJA 2BDXA 4B2OA 2WDFA 5JPEA 3V4YA 4WWLA 1QHWA 1IT6A 4M0VA 4MOVA 2YVTA 3ZU0A 4UWQA 1NNWA 1UF3A 3ZTVA 1WARA 3IB8A 1OIEA 4ORBA 1W24A 1S70A 3H62B 3TGHA 3QFOA 1UTEA 3ICFA 4ZVZA 3RL5A 4V0WA 4TUGA 3E7BA 2HY1A 4ZX2A 2AHDA 3QFKA 5EQVA 4V0VA 4NZVA 1S3NA 1XZWA 4LTYA 2NYMC 4H1SA 5GTUA 3H68A 1AUIA 1U32A 2O8AA 3CK2A 3DW8C 4KKZA 1JK7A 2R17A 1TCOA 1SU1A 3JYFA 4DT2A 1OIDA 5HPEA 3T1IA 2USHA 4IYPC 3DSCA 3RL4A 1WAO1 4MOYA 1S3LA 3H67A 4DSYA 2P6BA 3IVEA 3C5WC 3H64A 4UT2A 2ZBMA 1Z2WA 2Q8UA 4ORAA 1USHA 2CV9A 2Z06A 5DNYA 3FGAC 4KBPA 3HVQA 1II7A 3RQZA 4JA9A 1HP1A 2QFRA
chains in the Genus database with same CATH superfamily
4I5LC 5F3WA 1OI8A 1T70A 4H2GA 4TUIA 3AUZA 1T71A 2O8GA 3QG5C 4UT3A 2IAEC 3QFNA 4MP0A 1S8EA 5JPFA 1S3MA 4HD0A 1HPUA 4LACC 2QJCA 4O4KA 4Q7FA 1S95A 1XM7A 2ZOAA 3E7AA 2HYPA 3N5UA 5C1VA 2WDEA 5J28A 2NPPC 2XMOA 3THNA 2JOGA 4UT3B 3QFMA 2DXLA 3EGHA 2NYLC 4J6OA 1G5BA 4YKEA 2ZO9B 4G9JA 4FCXA 1QFCA 3K7WC 2GJUA 4FBWA 3DSDA 4O43A 3KBPA 3IB7A 2Z72A 4FBKA 5JJTA 4H1YP 3H61A 2KKNA 3LL8A 3H60A 1MF8A 2HYOA 1FJMA 3THOB 3H66A 1V73A 5INBA 3P71C 3AV0A 3C9FA 4H2BA 4IL1A 4FBQA 4I5NC 4O24A 4LU9A 1HO5A 2NXFA 2Z1AA 4O5GA 2WDCA 4OR9A 4F0ZA 4XPNA 3H63A 3PSOA 3EGGA 1M63A 1KBPA 4ORCA 2QFPA 5IOHA 4JA7A 2BCDA 3GVEA 2IE3C 4V0XA 3IVDA 4H2IA 2A22A 2YEQA 3H69A 3PSNA 4DHLA 2WDDA 4H2FA 2BQ8X 3RL3A 2IE4C 3K7VC 3E0JA 5B8IA 1Z2XA 2DFJA 2BDXA 4B2OA 2WDFA 5JPEA 3V4YA 4WWLA 1QHWA 1IT6A 4M0VA 4MOVA 2YVTA 3ZU0A 4UWQA 1NNWA 1UF3A 3ZTVA 1WARA 3IB8A 1OIEA 4ORBA 1W24A 1S70A 3H62B 3TGHA 3QFOA 1UTEA 2DXNA 3ICFA 4ZVZA 3RL5A 4V0WA 4TUGA 3E7BA 2HY1A 4ZX2A 2AHDA 3QFKA 5EQVA 4V0VA 3D03A 4NZVA 1S3NA 1XZWA 4LTYA 2NYMC 4H1SA 5GTUA 3H68A 1AUIA 1U32A 2O8AA 3CK2A 3DW8C 4KKZA 1JK7A 2R17A 1TCOA 1SU1A 3JYFA 4DT2A 1OIDA 5HPEA 3T1IA 2USHA 4IYPC 3DSCA 3RL4A 1WAO1 4MOYA 1S3LA 3H67A 4DSYA 2P6BA 3IVEA 3C5WC 3H64A 4UT2A 2ZBMA 1Z2WA 2Q8UA 4ORAA 1USHA 2CV9A 2Z06A 5DNYA 3FGAC 4KBPA 3HVQA 1II7A 3RQZA 4JA9A 3FLOA 1HP1A 2QFRA
chains in the Genus database with same CATH topology
4I5LC 5F3WA 1OI8A 1T70A 4H2GA 4TUIA 3AUZA 1T71A 2O8GA 3QG5C 4UT3A 2IAEC 3QFNA 4MP0A 1S8EA 5JPFA 1S3MA 4HD0A 1HPUA 4LACC 2QJCA 4O4KA 4Q7FA 1S95A 1XM7A 2ZOAA 3E7AA 2HYPA 3N5UA 5C1VA 2WDEA 5J28A 2NPPC 2XMOA 3THNA 2JOGA 4UT3B 3QFMA 2DXLA 3EGHA 2NYLC 4J6OA 1G5BA 4YKEA 2ZO9B 4G9JA 4FCXA 1QFCA 3K7WC 2GJUA 4FBWA 3DSDA 4O43A 3KBPA 3IB7A 2Z72A 4FBKA 5JJTA 4H1YP 3H61A 2KKNA 3LL8A 3H60A 1MF8A 2HYOA 1FJMA 3THOB 3H66A 1V73A 5INBA 3P71C 3AV0A 3C9FA 4H2BA 4IL1A 4FBQA 4I5NC 4O24A 4LU9A 1HO5A 2NXFA 2Z1AA 4O5GA 2WDCA 4OR9A 4F0ZA 4XPNA 3H63A 3PSOA 3EGGA 1M63A 1KBPA 4ORCA 2QFPA 5IOHA 4JA7A 2BCDA 3GVEA 2IE3C 4V0XA 3IVDA 4H2IA 2A22A 2YEQA 3H69A 3PSNA 4DHLA 2WDDA 4H2FA 2BQ8X 3RL3A 2IE4C 3K7VC 3E0JA 5B8IA 1Z2XA 2DFJA 2BDXA 4B2OA 2WDFA 5JPEA 3V4YA 4WWLA 1QHWA 1IT6A 4M0VA 4MOVA 2YVTA 3ZU0A 4UWQA 1NNWA 1UF3A 3ZTVA 1WARA 3IB8A 1OIEA 4ORBA 1W24A 1S70A 3H62B 3TGHA 3QFOA 1UTEA 2DXNA 3ICFA 4ZVZA 3RL5A 4V0WA 4TUGA 3E7BA 2HY1A 4ZX2A 2AHDA 3QFKA 5EQVA 4V0VA 3D03A 4NZVA 1S3NA 1XZWA 4LTYA 2NYMC 4H1SA 5GTUA 3H68A 1AUIA 1U32A 2O8AA 3CK2A 3DW8C 4KKZA 1JK7A 2R17A 1TCOA 1SU1A 3JYFA 4DT2A 1OIDA 5HPEA 3T1IA 2USHA 4IYPC 3DSCA 3RL4A 1WAO1 4MOYA 1S3LA 3H67A 4DSYA 2P6BA 3IVEA 3C5WC 3H64A 4UT2A 2ZBMA 1Z2WA 2Q8UA 4ORAA 1USHA 2CV9A 2Z06A 5DNYA 3FGAC 4KBPA 3HVQA 1II7A 3RQZA 4JA9A 3FLOA 1HP1A 2QFRA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4I5L C;  5F3W A;  1OI8 A;  1T70 A;  4H2G A;  4TUI A;  3AUZ A;  1T71 A;  2O8G A;  3QG5 C;  4UT3 A;  2IAE C;  3QFN A;  4MP0 A;  1S8E A;  5JPF A;  1S3M A;  4HD0 A;  1HPU A;  4LAC C;  2QJC A;  4O4K A;  4Q7F A;  1S95 A;  1XM7 A;  3E7A A;  3N5U A;  2HYP A;  5C1V A;  2WDE A;  5J28 A;  2NPP C;  2XMO A;  3THN A;  2JOG A;  4UT3 B;  3QFM A;  3EGH A;  2NYL C;  4J6O A;  1G5B A;  4YKE A;  4G9J A;  4FCX A;  1QFC A;  3K7W C;  2GJU A;  4FBW A;  3DSD A;  4O43 A;  3KBP A;  3IB7 A;  2Z72 A;  4FBK A;  5JJT A;  4H1Y P;  3H61 A;  2KKN A;  3LL8 A;  3H60 A;  1MF8 A;  2HYO A;  1FJM A;  3THO B;  3H66 A;  1V73 A;  5INB A;  3P71 C;  3AV0 A;  3C9F A;  4H2B A;  4IL1 A;  4FBQ A;  4I5N C;  4O24 A;  4LU9 A;  1HO5 A;  2NXF A;  2Z1A A;  4O5G A;  2WDC A;  4OR9 A;  4F0Z A;  4XPN A;  3H63 A;  3PSO A;  3EGG A;  1M63 A;  1KBP A;  4ORC A;  2QFP A;  5IOH A;  4JA7 A;  2BCD A;  3GVE A;  2IE3 C;  4V0X A;  3IVD A;  4H2I A;  2A22 A;  3H69 A;  3PSN A;  4DHL A;  2WDD A;  4H2F A;  2BQ8 X;  3RL3 A;  2IE4 C;  3K7V C;  5B8I A;  1Z2X A;  2DFJ A;  2BDX A;  4B2O A;  2WDF A;  5JPE A;  3V4Y A;  4WWL A;  1QHW A;  1IT6 A;  4M0V A;  4MOV A;  2YVT A;  3ZU0 A;  4UWQ A;  1NNW A;  1UF3 A;  3ZTV A;  1WAR A;  3IB8 A;  1OIE A;  4ORB A;  1W24 A;  1S70 A;  3H62 B;  3TGH A;  3QFO A;  1UTE A;  3ICF A;  4ZVZ A;  3RL5 A;  4V0W A;  4TUG A;  3E7B A;  2HY1 A;  4ZX2 A;  2AHD A;  3QFK A;  5EQV A;  4V0V A;  4NZV A;  1S3N A;  1XZW A;  4LTY A;  2NYM C;  4H1S A;  5GTU A;  3H68 A;  1AUI A;  1U32 A;  2O8A A;  3CK2 A;  3DW8 C;  4KKZ A;  1JK7 A;  2R17 A;  1TCO A;  1SU1 A;  3JYF A;  4DT2 A;  1OID A;  5HPE A;  3T1I A;  2USH A;  4IYP C;  3DSC A;  3RL4 A;  1WAO 1;  4MOY A;  1S3L A;  3H67 A;  4DSY A;  2P6B A;  3IVE A;  3C5W C;  3H64 A;  4UT2 A;  2ZBM A;  1Z2W A;  2Q8U A;  4ORA A;  1USH A;  2CV9 A;  2Z06 A;  5DNY A;  3FGA C;  4KBP A;  3HVQ A;  1II7 A;  3RQZ A;  4JA9 A;  1HP1 A;  2QFR A; 
#chains in the Genus database with same CATH topology
 4I5L C;  5F3W A;  1OI8 A;  1T70 A;  4H2G A;  4TUI A;  3AUZ A;  1T71 A;  2O8G A;  3QG5 C;  4UT3 A;  2IAE C;  3QFN A;  4MP0 A;  1S8E A;  5JPF A;  1S3M A;  4HD0 A;  1HPU A;  4LAC C;  2QJC A;  4O4K A;  4Q7F A;  1S95 A;  1XM7 A;  2ZOA A;  3E7A A;  2HYP A;  3N5U A;  5C1V A;  2WDE A;  5J28 A;  2NPP C;  2XMO A;  3THN A;  2JOG A;  4UT3 B;  3QFM A;  2DXL A;  3EGH A;  2NYL C;  4J6O A;  1G5B A;  4YKE A;  2ZO9 B;  4G9J A;  4FCX A;  1QFC A;  3K7W C;  2GJU A;  4FBW A;  3DSD A;  4O43 A;  3KBP A;  3IB7 A;  2Z72 A;  4FBK A;  5JJT A;  4H1Y P;  3H61 A;  2KKN A;  3LL8 A;  3H60 A;  1MF8 A;  2HYO A;  1FJM A;  3THO B;  3H66 A;  1V73 A;  5INB A;  3P71 C;  3AV0 A;  3C9F A;  4H2B A;  4IL1 A;  4FBQ A;  4I5N C;  4O24 A;  4LU9 A;  1HO5 A;  2NXF A;  2Z1A A;  4O5G A;  2WDC A;  4OR9 A;  4F0Z A;  4XPN A;  3H63 A;  3PSO A;  3EGG A;  1M63 A;  1KBP A;  4ORC A;  2QFP A;  5IOH A;  4JA7 A;  2BCD A;  3GVE A;  2IE3 C;  4V0X A;  3IVD A;  4H2I A;  2A22 A;  2YEQ A;  3H69 A;  3PSN A;  4DHL A;  2WDD A;  4H2F A;  2BQ8 X;  3RL3 A;  2IE4 C;  3K7V C;  3E0J A;  5B8I A;  1Z2X A;  2DFJ A;  2BDX A;  4B2O A;  2WDF A;  5JPE A;  3V4Y A;  4WWL A;  1QHW A;  1IT6 A;  4M0V A;  4MOV A;  2YVT A;  3ZU0 A;  4UWQ A;  1NNW A;  1UF3 A;  3ZTV A;  1WAR A;  3IB8 A;  1OIE A;  4ORB A;  1W24 A;  1S70 A;  3H62 B;  3TGH A;  3QFO A;  1UTE A;  2DXN A;  3ICF A;  4ZVZ A;  3RL5 A;  4V0W A;  4TUG A;  3E7B A;  2HY1 A;  4ZX2 A;  2AHD A;  3QFK A;  5EQV A;  4V0V A;  3D03 A;  4NZV A;  1S3N A;  1XZW A;  4LTY A;  2NYM C;  4H1S A;  5GTU A;  3H68 A;  1AUI A;  1U32 A;  2O8A A;  3CK2 A;  3DW8 C;  4KKZ A;  1JK7 A;  2R17 A;  1TCO A;  1SU1 A;  3JYF A;  4DT2 A;  1OID A;  5HPE A;  3T1I A;  2USH A;  4IYP C;  3DSC A;  3RL4 A;  1WAO 1;  4MOY A;  1S3L A;  3H67 A;  4DSY A;  2P6B A;  3IVE A;  3C5W C;  3H64 A;  4UT2 A;  2ZBM A;  1Z2W A;  2Q8U A;  4ORA A;  1USH A;  2CV9 A;  2Z06 A;  5DNY A;  3FGA C;  4KBP A;  3HVQ A;  1II7 A;  3RQZ A;  4JA9 A;  3FLO A;  1HP1 A;  2QFR A; 
#chains in the Genus database with same CATH homology
 4I5L C;  5F3W A;  1OI8 A;  1T70 A;  4H2G A;  4TUI A;  3AUZ A;  1T71 A;  2O8G A;  3QG5 C;  4UT3 A;  2IAE C;  3QFN A;  4MP0 A;  1S8E A;  5JPF A;  1S3M A;  4HD0 A;  1HPU A;  4LAC C;  2QJC A;  4O4K A;  4Q7F A;  1S95 A;  1XM7 A;  2ZOA A;  3E7A A;  2HYP A;  3N5U A;  5C1V A;  2WDE A;  5J28 A;  2NPP C;  2XMO A;  3THN A;  2JOG A;  4UT3 B;  3QFM A;  2DXL A;  3EGH A;  2NYL C;  4J6O A;  1G5B A;  4YKE A;  2ZO9 B;  4G9J A;  4FCX A;  1QFC A;  3K7W C;  2GJU A;  4FBW A;  3DSD A;  4O43 A;  3KBP A;  3IB7 A;  2Z72 A;  4FBK A;  5JJT A;  4H1Y P;  3H61 A;  2KKN A;  3LL8 A;  3H60 A;  1MF8 A;  2HYO A;  1FJM A;  3THO B;  3H66 A;  1V73 A;  5INB A;  3P71 C;  3AV0 A;  3C9F A;  4H2B A;  4IL1 A;  4FBQ A;  4I5N C;  4O24 A;  4LU9 A;  1HO5 A;  2NXF A;  2Z1A A;  4O5G A;  2WDC A;  4OR9 A;  4F0Z A;  4XPN A;  3H63 A;  3PSO A;  3EGG A;  1M63 A;  1KBP A;  4ORC A;  2QFP A;  5IOH A;  4JA7 A;  2BCD A;  3GVE A;  2IE3 C;  4V0X A;  3IVD A;  4H2I A;  2A22 A;  2YEQ A;  3H69 A;  3PSN A;  4DHL A;  2WDD A;  4H2F A;  2BQ8 X;  3RL3 A;  2IE4 C;  3K7V C;  3E0J A;  5B8I A;  1Z2X A;  2DFJ A;  2BDX A;  4B2O A;  2WDF A;  5JPE A;  3V4Y A;  4WWL A;  1QHW A;  1IT6 A;  4M0V A;  4MOV A;  2YVT A;  3ZU0 A;  4UWQ A;  1NNW A;  1UF3 A;  3ZTV A;  1WAR A;  3IB8 A;  1OIE A;  4ORB A;  1W24 A;  1S70 A;  3H62 B;  3TGH A;  3QFO A;  1UTE A;  2DXN A;  3ICF A;  4ZVZ A;  3RL5 A;  4V0W A;  4TUG A;  3E7B A;  2HY1 A;  4ZX2 A;  2AHD A;  3QFK A;  5EQV A;  4V0V A;  3D03 A;  4NZV A;  1S3N A;  1XZW A;  4LTY A;  2NYM C;  4H1S A;  5GTU A;  3H68 A;  1AUI A;  1U32 A;  2O8A A;  3CK2 A;  3DW8 C;  4KKZ A;  1JK7 A;  2R17 A;  1TCO A;  1SU1 A;  3JYF A;  4DT2 A;  1OID A;  5HPE A;  3T1I A;  2USH A;  4IYP C;  3DSC A;  3RL4 A;  1WAO 1;  4MOY A;  1S3L A;  3H67 A;  4DSY A;  2P6B A;  3IVE A;  3C5W C;  3H64 A;  4UT2 A;  2ZBM A;  1Z2W A;  2Q8U A;  4ORA A;  1USH A;  2CV9 A;  2Z06 A;  5DNY A;  3FGA C;  4KBP A;  3HVQ A;  1II7 A;  3RQZ A;  4JA9 A;  3FLO A;  1HP1 A;  2QFR A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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