4N3PA

Crystal structure of de novo designed serine hydrolase osh18, northeast structural genomics consortium (nesg) target or396
Total Genus 113
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
113
sequence length
428
structure length
424
Chain Sequence
MKLKTNIRHLHGIIRVPGDSSISVLSIIFGSLAEGETKVYDILRGEDVLSTMQVFRDLGVEIEDKDGVITVQGVGMAGLKAPQNALNMGNSGASIVAISGVLAGADFEVEMFGDDSLSKRPMDRVTLPLKKMGVSISGQTERDLPPLRLKGTKNLRPIHYELPIASNSVKSALMFAALQAKGESVIIEKEYTSNHTEDMLQQFGGHLSVDGKKITVQGPQKLTGQKVVVPGDISSAAFWLVAGLIAPNSRLVLQNVGIEETLTGIIDVIRAMGGKLEITEIDPVAKSATLIVESSDLKGTEICGALIPRLIDELPIIALLATQAQGVTVIKDAEELKVKETDRIQVVADALNSMGADITPTADGMIIKGKSALHGARVNTFGDHRIGMMTAIAALLVADGEVELDRAEAIPSFFDDLESLIHGL
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Hydrolase
molecule keywords Serine Hydrolase OSH18
publication title Crystal Structure of De Novo designed Serine Hydrolase OSH18, Northeast Structural Genomics Consortium (NESG) Target OR396
rcsb
source organism Synthetic construct
total genus 113
structure length 424
sequence length 428
chains with identical sequence B
ec nomenclature
pdb deposition date 2013-10-07
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 4n3pA02
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 4n3pA01
2O0ZA 3SWQA 2AA9A 2O15A 1Q3GA 3ZH4A 4FQDA 4E7FA 4GFPA 4E7CA 2QFTA 3UPKA 1RF6A 3KQJA 1RF4A 1A2NA 1MI4A 3SU9A 4EIIA 1G6TA 1G6SA 2QFUA 5U4HA 5BUFA 1NAWA 3SG1A 2O0DA 2BJBA 3SWDA 3FK0A 2PQ9A 2QFQA 3SWIA 3V5VA 1RYWA 2PQDA 4R7UA 3ROIA 1DLGA 2PQBA 3KQAA 2O0BA 2O0XA 1EJCA 3FJXA 3RMTA 3SWAA 2GG4A 1P89A 1YBGA 1UAEA 3ZH3A 5BS5A 3V4TA 2AAYA 3R38A 1EYNA 3SPBA 3SWGA 2O0EA 3TR1A 3TI2A 2QFSA 3LTHA 2YVWA 2RL1A 3NVSA 2GGAA 3VCYA 4E7BA 3KR6A 4E7GA 4EGRA 2Z2CA 3SWEA 3FJZA 2GG6A 5BQ2A 4ZNDA 1Q36A 1X8TA 1P88A 4N3PA 4E7EA 3FK1A 3SLHA 4E7DA 1RF5A 1X8RA 2PQCA 2RL2A 3ISSA 2GGDA 1EJDA
chains in the Genus database with same CATH superfamily
2O0ZA 3SWQA 2AA9A 2O15A 1Q3GA 3ZH4A 4FQDA 4E7FA 4GFPA 4E7CA 2QFTA 3UPKA 1RF6A 3KQJA 3KGDA 1RF4A 1A2NA 1MI4A 1QMHA 3SU9A 4CLQA 4EIIA 1G6TA 1G6SA 2QFUA 5U4HA 5BUFA 1NAWA 3SG1A 2O0DA 1QMIA 2BJBA 3SWDA 3FK0A 2PQ9A 2QFQA 3SWIA 4O89A 3V5VA 1RYWA 2PQDA 4R7UA 3ROIA 1DLGA 2PQBA 3KQAA 2O0BA 2O0XA 1EJCA 3FJXA 3RMTA 3SWAA 2GG4A 1P89A 1YBGA 1UAEA 3ZH3A 5BS5A 3V4TA 3TV1A 2AAYA 3PQVA 3R38A 1EYNA 3SPBA 3SWGA 2O0EA 3TR1A 3TI2A 2QFSA 3TUXA 3LTHA 2YVWA 2RL1A 3NVSA 2GGAA 3VCYA 4E7BA 3KR6A 4E7GA 4EGRA 2Z2CA 3SWEA 3FJZA 2GG6A 4O8JA 5BQ2A 4ZNDA 1Q36A 3TW3A 1X8TA 1P88A 4N3PA 4E7EA 3FK1A 3SLHA 4E7DA 1RF5A 1X8RA 2PQCA 2RL2A 3TUTA 3ISSA 2GGDA 1EJDA
chains in the Genus database with same CATH topology
2O0ZA 3SWQA 2AA9A 2O15A 1Q3GA 3ZH4A 4FQDA 4E7FA 4GFPA 4E7CA 2QFTA 3UPKA 1RF6A 3KQJA 1RF4A 1A2NA 1MI4A 3SU9A 4EIIA 1G6TA 1G6SA 2QFUA 5U4HA 5BUFA 1NAWA 3SG1A 2O0DA 2BJBA 3SWDA 3FK0A 2PQ9A 2QFQA 3SWIA 3V5VA 1RYWA 2PQDA 4R7UA 3ROIA 1DLGA 2PQBA 3KQAA 2O0BA 2O0XA 1EJCA 3FJXA 3RMTA 3SWAA 2GG4A 1P89A 1YBGA 1UAEA 3ZH3A 5BS5A 3V4TA 2AAYA 3R38A 1EYNA 3SPBA 3SWGA 2O0EA 3TR1A 3TI2A 2QFSA 3LTHA 2YVWA 2RL1A 3NVSA 2GGAA 3VCYA 4E7BA 3KR6A 4E7GA 4EGRA 2Z2CA 3SWEA 3FJZA 2GG6A 5BQ2A 4ZNDA 1Q36A 1X8TA 1P88A 4N3PA 4E7EA 3FK1A 3SLHA 4E7DA 1RF5A 1X8RA 2PQCA 2RL2A 3ISSA 2GGDA 1EJDA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2O0Z A;  3SWQ A;  2AA9 A;  2O15 A;  1Q3G A;  3ZH4 A;  4FQD A;  4E7F A;  4GFP A;  4E7C A;  2QFT A;  3UPK A;  1RF6 A;  3KQJ A;  1RF4 A;  1A2N A;  1MI4 A;  3SU9 A;  4EII A;  1G6T A;  1G6S A;  2QFU A;  5U4H A;  5BUF A;  1NAW A;  3SG1 A;  2O0D A;  2BJB A;  3SWD A;  3FK0 A;  2PQ9 A;  2QFQ A;  3SWI A;  3V5V A;  1RYW A;  2PQD A;  4R7U A;  3ROI A;  1DLG A;  2PQB A;  3KQA A;  2O0B A;  2O0X A;  1EJC A;  3FJX A;  3RMT A;  3SWA A;  2GG4 A;  1P89 A;  1YBG A;  1UAE A;  3ZH3 A;  5BS5 A;  3V4T A;  2AAY A;  3R38 A;  1EYN A;  3SPB A;  3SWG A;  2O0E A;  3TR1 A;  3TI2 A;  2QFS A;  3LTH A;  2YVW A;  2RL1 A;  3NVS A;  2GGA A;  3VCY A;  4E7B A;  3KR6 A;  4E7G A;  4EGR A;  2Z2C A;  3SWE A;  3FJZ A;  2GG6 A;  5BQ2 A;  4ZND A;  1Q36 A;  1X8T A;  1P88 A;  4N3P A;  4E7E A;  3FK1 A;  3SLH A;  4E7D A;  1RF5 A;  1X8R A;  2PQC A;  2RL2 A;  3ISS A;  2GGD A;  1EJD A; 
#chains in the Genus database with same CATH topology
 2O0Z A;  3SWQ A;  2AA9 A;  2O15 A;  1Q3G A;  3ZH4 A;  4FQD A;  4E7F A;  4GFP A;  4E7C A;  2QFT A;  3UPK A;  1RF6 A;  3KQJ A;  3KGD A;  1RF4 A;  1A2N A;  1MI4 A;  1QMH A;  3SU9 A;  4CLQ A;  4EII A;  1G6T A;  1G6S A;  2QFU A;  5U4H A;  5BUF A;  1NAW A;  3SG1 A;  2O0D A;  1QMI A;  2BJB A;  3SWD A;  3FK0 A;  2PQ9 A;  2QFQ A;  3SWI A;  4O89 A;  3V5V A;  1RYW A;  2PQD A;  4R7U A;  3ROI A;  1DLG A;  2PQB A;  3KQA A;  2O0B A;  2O0X A;  1EJC A;  3FJX A;  3RMT A;  3SWA A;  2GG4 A;  1P89 A;  1YBG A;  1UAE A;  3ZH3 A;  5BS5 A;  3V4T A;  3TV1 A;  2AAY A;  3PQV A;  3R38 A;  1EYN A;  3SPB A;  3SWG A;  2O0E A;  3TR1 A;  3TI2 A;  2QFS A;  3TUX A;  3LTH A;  2YVW A;  2RL1 A;  3NVS A;  2GGA A;  3VCY A;  4E7B A;  3KR6 A;  4E7G A;  4EGR A;  2Z2C A;  3SWE A;  3FJZ A;  2GG6 A;  4O8J A;  5BQ2 A;  4ZND A;  1Q36 A;  3TW3 A;  1X8T A;  1P88 A;  4N3P A;  4E7E A;  3FK1 A;  3SLH A;  4E7D A;  1RF5 A;  1X8R A;  2PQC A;  2RL2 A;  3TUT A;  3ISS A;  2GGD A;  1EJD A; 
#chains in the Genus database with same CATH homology
 2O0Z A;  3SWQ A;  2AA9 A;  2O15 A;  1Q3G A;  3ZH4 A;  4FQD A;  4E7F A;  4GFP A;  4E7C A;  2QFT A;  3UPK A;  1RF6 A;  3KQJ A;  1RF4 A;  1A2N A;  1MI4 A;  3SU9 A;  4EII A;  1G6T A;  1G6S A;  2QFU A;  5U4H A;  5BUF A;  1NAW A;  3SG1 A;  2O0D A;  2BJB A;  3SWD A;  3FK0 A;  2PQ9 A;  2QFQ A;  3SWI A;  3V5V A;  1RYW A;  2PQD A;  4R7U A;  3ROI A;  1DLG A;  2PQB A;  3KQA A;  2O0B A;  2O0X A;  1EJC A;  3FJX A;  3RMT A;  3SWA A;  2GG4 A;  1P89 A;  1YBG A;  1UAE A;  3ZH3 A;  5BS5 A;  3V4T A;  2AAY A;  3R38 A;  1EYN A;  3SPB A;  3SWG A;  2O0E A;  3TR1 A;  3TI2 A;  2QFS A;  3LTH A;  2YVW A;  2RL1 A;  3NVS A;  2GGA A;  3VCY A;  4E7B A;  3KR6 A;  4E7G A;  4EGR A;  2Z2C A;  3SWE A;  3FJZ A;  2GG6 A;  5BQ2 A;  4ZND A;  1Q36 A;  1X8T A;  1P88 A;  4N3P A;  4E7E A;  3FK1 A;  3SLH A;  4E7D A;  1RF5 A;  1X8R A;  2PQC A;  2RL2 A;  3ISS A;  2GGD A;  1EJD A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...