4NE3B

Human mhf1-mhf2 complex
Total Genus 25
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
25
sequence length
74
structure length
74
Chain Sequence
SGFRKELVSRLLHLHFKDDKTKVSGDALQLMVELLKVFVVEAAVRGVRQAQAEDALRVDVDQLEKVLPQLLLDF
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Dna binding protein
molecule keywords Centromere protein S
publication title The MHF complex senses branched DNA by binding a pair of crossover DNA duplexes.
pubmed doi rcsb
source organism Homo sapiens
total genus 25
structure length 74
sequence length 74
ec nomenclature
pdb deposition date 2013-10-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF09415 CENP-X CENP-S associating Centromere protein X
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.286.100 Mainly Alpha Orthogonal Bundle GTP Cyclohydrolase I; Chain A, domain 1 GTP Cyclohydrolase I; Chain A, domain 1 4ne3B02
4E44B 4NE3B 4NE6B 4E45B 4DRBJ 4NE5B 3B0BC 4DRAE
chains in the Genus database with same CATH superfamily
1WPLA 2WSEK 1FB1A 2PN0A 1IS8A 1N3RA 4Q7JA 1N3TA 1TFEA 3VEJA 4JA3A 4QPMA 2WSEG 1WURA 1EFUB 2LNZA 2WSCK 5DMZA 4E45B 2O01G 3B0BC 1WM9A 1A8RA 4R8QA 1A9CA 3BMBA 2LO0A 2WSFK 4E44B 2WSCG 4DU6A 1FBXA 3LW5K 2WSFG 1WUQA 4NE3B 1EL6A 2P11A 1AIPC 4NE6B 4DRBJ 1GTPA 4NE5B 1IS7A 3LW5G 2KR1A 1N3SA 4DRAE
chains in the Genus database with same CATH topology
1WPLA 1FB1A 2PN0A 1IS8A 1N3RA 4Q7JA 1N3TA 1TFEA 3VEJA 4JA3A 4QPMA 1WURA 1EFUB 2LNZA 5DMZA 4E45B 3B0BC 1WM9A 1A8RA 4R8QA 1A9CA 3BMBA 2LO0A 4E44B 4DU6A 1FBXA 1WUQA 4NE3B 1EL6A 2P11A 1AIPC 4NE6B 4DRBJ 1GTPA 4NE5B 1IS7A 2KR1A 1N3SA 4DRAE
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4E44 B;  4NE3 B;  4NE6 B;  4E45 B;  4DRB J;  4NE5 B;  3B0B C;  4DRA E; 
#chains in the Genus database with same CATH topology
 1WPL A;  2WSE K;  1FB1 A;  2PN0 A;  1IS8 A;  1N3R A;  4Q7J A;  1N3T A;  1TFE A;  3VEJ A;  4JA3 A;  4QPM A;  2WSE G;  1WUR A;  1EFU B;  2LNZ A;  2WSC K;  5DMZ A;  4E45 B;  2O01 G;  3B0B C;  1WM9 A;  1A8R A;  4R8Q A;  1A9C A;  3BMB A;  2LO0 A;  2WSF K;  4E44 B;  2WSC G;  4DU6 A;  1FBX A;  3LW5 K;  2WSF G;  1WUQ A;  4NE3 B;  1EL6 A;  2P11 A;  1AIP C;  4NE6 B;  4DRB J;  1GTP A;  4NE5 B;  1IS7 A;  3LW5 G;  2KR1 A;  1N3S A;  4DRA E; 
#chains in the Genus database with same CATH homology
 1WPL A;  1FB1 A;  2PN0 A;  1IS8 A;  1N3R A;  4Q7J A;  1N3T A;  1TFE A;  3VEJ A;  4JA3 A;  4QPM A;  1WUR A;  1EFU B;  2LNZ A;  5DMZ A;  4E45 B;  3B0B C;  1WM9 A;  1A8R A;  4R8Q A;  1A9C A;  3BMB A;  2LO0 A;  4E44 B;  4DU6 A;  1FBX A;  1WUQ A;  4NE3 B;  1EL6 A;  2P11 A;  1AIP C;  4NE6 B;  4DRB J;  1GTP A;  4NE5 B;  1IS7 A;  2KR1 A;  1N3S A;  4DRA E; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...