The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
72
|
sequence length |
263
|
structure length |
261
|
Chain Sequence |
YQTQVSGYIITVPNETTQIRKFLASNQRINQFLFQHSTFRVELAPFAKGGERLAFRAINGRGDRIVLKRFFQQRPLTMLLETIERQLICIYLANIFNKLNVSPNKLHFLPNYLFIPSPTKDLDGKILTLEQTEQAVAATCRTPNFVEPYLSGYFIKYIDNNGWINESEFHSTLHAFAHWTWVHTKGALLICDIQGVNANNKFYLTDPALHHIDQNKFIYSETNLGEVGISQFFRTHQCNAICQGLHLPKHKEQVLPDTKGT
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
| publication title |
Structural and functional characterization of a novel Alpha Kinase in complex with ADP from Entamoeba histolytica
rcsb |
| molecule tags |
Transferase
|
| source organism |
Entamoeba histolytica
|
| molecule keywords |
Protein kinase, putative
|
| total genus |
72
|
| structure length |
261
|
| sequence length |
263
|
| chains with identical sequence |
B
|
| ec nomenclature | |
| pdb deposition date | 2013-11-13 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF02816 | Alpha_kinase | Alpha-kinase family |
Image from the rcsb pdb (www.rcsb.org)
cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Alpha Beta | Alpha-Beta Barrel | Protein kinase-like fold | MHCK/EF2 kinase | ||
| Alpha Beta | 2-Layer Sandwich | Phosphorylase Kinase; domain 1 | Phosphorylase Kinase; domain 1 |
