4O95A

Crystal structure of maize cytokinin oxidase/dehydrogenase 4 (zmcko4) in complex with phenylurea inhibitor cppu
Total Genus 147
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
147
sequence length
494
structure length
467
Chain Sequence
VGGGRLSVDASDIAEASRDFGGVARAEPMAVFHPRAAGDVAGLVGAAFRSARGFRVSARGHGHSISGQAQAAGGVVVDMSRGRGPGAAVARALPVHSAALGGHYVDVWGGELWVDVLNWTLSHGGLAPRSWTDYLYLSVGGTLSNAGISGQAFHHGPQISNVYELDVVTGKGEVVTCSETENPDLFFGVLGGLGQFGIITRARIALERAPKRVRWIRALYSNFSEFTADQERLISLGSGGGRRFDYVEGFVVAASVLYCLEVTKNYDDETAGSVDQDVDTLLGELNFLPGTVFTTDLPYVDFLDRVHKAELKLRAKGMWEVPHPWLNLFVPASRIADFDRGVFRGVLGGRTAGAGGPVLIYPMNKHKWDPRSSAVTPDEEVFYLVAFLRSALPGAPESLEALARQNQRILDFCAGTGIGAKQYLPGHKARHEWAEHFGAARWDRFARLKAEFDPRAILAAGQGIFRP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Oxidoreductase
molecule keywords Cytokinin dehydrogenase 4
publication title Kinetic and structural investigation of the cytokinin oxidase/dehydrogenase active site
pubmed doi rcsb
source organism Zea mays
total genus 147
structure length 467
sequence length 494
ec nomenclature ec 1.5.99.12: Cytokinin dehydrogenase.
pdb deposition date 2014-01-01

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF09265 Cytokin-bind Cytokinin dehydrogenase 1, FAD and cytokinin binding
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 4o95A01
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 4o95A02
3.40.462.10 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 FAD-linked oxidases, C-terminal domain 4o95A03
1MBBA 3BW7A 1WVFA 1DZNA 1FIQB 2PLSA 1E8GA 1UXYA 4UD8A 5FXPA 3NVYB 1FFUC 3NVVB 1JROA 4BCAA 3W8XA 3DQ0A 1N5WC 1AHZA 4PWBA 2Q85A 4ZOHB 2VFSA 4PVJA 1W1KA 3D2HA 2Q4WA 3FW9A 5HQXA 1V97A 1W1JA 1T3QC 4PVEA 5G5HB 5G5GB 1W1RA 3FW8A 3KJMA 1FFVC 3S1DA 3GSYA 2R8DA 3HRDC 2VFVA 1VDVA 5AE1A 2W55A 3S1EA 3C0PA 2P4PA 3ETRB 2I0KA 3S1CA 2GQUA 3AN1A 4BC7A 5D79A 2VFTA 1DIQA 4BC9A 3AM9A 2QKNA 1QLTA 1AHUA 4ML8A 3I99A 2BVHA 1MBTA 1RM6B 2NQWA 1N61C 5AE2A 3TSHA 5FXDA 2QPMA 1DIIA 5FXEA 2R2ZA 2E3TA 1F0XA 3EUB3 1JRPA 2BVGA 4MLAA 1WYGA 2YVSA 3PM9A 5ADZA 1SB3B 2P13A 1AHVA 1N60C 1N63C 2AXRA 3D2DA 1HSKA 4BBYA 4PVHA 4HG0A 3B9JB 1W1MA 1W1OA 2GQTA 1E0YA 2VAOA 2RK5A 2EXRA 2BVFA 3VTEA 1WVEA 2VFUA 1FO4A 1W1SA 2W54A 3NVZB 4O95A 3DEDA 3FWAA 2VFRA 4PYTA 4JAYA 3TX1A 3FW7A 1E8HA 1W1QA 3NVWB 3TSJA 2W3RA 3LLBA 3S1FA 2O3GA 2MBRA 4DNSA 5FXFA 3SR6B 5HHZA 4PWCA 3JS8A 1E8FA 4JB1A 4XLOA 2PLIA 3W8WA 1N62C 4PZFA 4EC3A 3W8ZA 5AE3A 2W3SA 4OALA 1VAOA 1ZXIC 1W1LA 3NS1B 3NRZB 3AMZA 3D2JA 1I19A 1N5XA 2OAIA 1QLUA 2P3HA 3LAEA 4PVKA 1ZR6A 5HMRA
chains in the Genus database with same CATH superfamily
1MBBA 3BW7A 1WVFA 1DZNA 1FIQB 2PLSA 1E8GA 1UXYA 4UD8A 5FXPA 3NVYB 1FFUC 3POPA 5K8EA 3NVVB 1JROA 4BCAA 3W8XA 3DQ0A 1N5WC 3RJAA 1AHZA 4PWBA 2Q85A 4ZOHB 2VFSA 4PVJA 1W1KA 3D2HA 2Y3SA 2Q4WA 3FW9A 5HQXA 1V97A 1W1JA 1T3QC 4PVEA 5G5HB 5G5GB 5L6GA 1W1RA 3FW8A 3KJMA 1FFVC 3S1DA 3GSYA 2R8DA 3HRDC 2VFVA 1VDVA 5AE1A 2W55A 5AWVA 3S1EA 3C0PA 3EJDB 2P4PA 3ETRB 2I0KA 3HSUA 3S1CA 2GQUA 3AN1A 4BC7A 5D79A 2VFTA 1DIQA 4BC9A 3AM9A 2QKNA 1QLTA 1AHUA 4ML8A 3I99A 2BVHA 1MBTA 1RM6B 2NQWA 2Y08A 1N61C 5AE2A 3TSHA 5FXDA 2QPMA 1DIIA 5FXEA 2R2ZA 2E3TA 1F0XA 2UUVA 3EUB3 1JRPA 2BVGA 4MLAA 1WYGA 2YVSA 3PM9A 5ADZA 1SB3B 5I1WA 2P13A 1AHVA 2Y4GA 1N60C 1N63C 2AXRA 3D2DA 1HSKA 4BBYA 4PVHA 4HG0A 3B9JB 3EJEB 1W1MA 1W1OA 2GQTA 1E0YA 2VAOA 2RK5A 2EXRA 2BVFA 3VTEA 1WVEA 2VFUA 1FO4A 1W1SA 2UUUA 5I1VA 2W54A 3NVZB 4O95A 3DEDA 3FWAA 2VFRA 3PQBA 4PYTA 4JAYA 3TX1A 3FW7A 5L6FA 1E8HA 1W1QA 3NVWB 3TSJA 2W3RA 3LLBA 3S1FA 2O3GA 2IPIA 2MBRA 4DNSA 5FXFA 3SR6B 5HHZA 4PWCA 3JS8A 1E8FA 4JB1A 4XLOA 2PLIA 3W8WA 2WDWA 1N62C 4PZFA 4EC3A 3W8ZA 5AE3A 2W3SA 4OALA 1VAOA 2Y3RA 3RJ8A 1ZXIC 1W1LA 3NS1B 3NRZB 3AMZA 3D2JA 1I19A 1N5XA 2OAIA 1QLUA 2P3HA 3LAEA 4PVKA 3EJBB 1ZR6A 5HMRA
chains in the Genus database with same CATH topology
1MBBA 3BW7A 1WVFA 1DZNA 1FIQB 2PLSA 1E8GA 1UXYA 4UD8A 5FXPA 3NVYB 1FFUC 3POPA 5K8EA 3NVVB 1JROA 4BCAA 3W8XA 3DQ0A 1N5WC 3RJAA 1AHZA 4PWBA 2Q85A 4ZOHB 2VFSA 4PVJA 1W1KA 3D2HA 2Y3SA 2Q4WA 3FW9A 5HQXA 1V97A 1W1JA 1T3QC 4PVEA 5G5HB 5G5GB 5L6GA 1W1RA 3FW8A 3KJMA 1FFVC 3S1DA 3GSYA 2R8DA 3HRDC 2VFVA 1VDVA 5AE1A 2W55A 5AWVA 3S1EA 3C0PA 2P4PA 3ETRB 2I0KA 3HSUA 3S1CA 2GQUA 3AN1A 4BC7A 5D79A 2VFTA 1DIQA 4BC9A 3AM9A 2QKNA 1QLTA 1AHUA 4ML8A 3I99A 2BVHA 1MBTA 1RM6B 2NQWA 2Y08A 1N61C 5AE2A 3TSHA 5FXDA 2QPMA 1DIIA 5FXEA 2R2ZA 2E3TA 1F0XA 2UUVA 3EUB3 1JRPA 2BVGA 4MLAA 1WYGA 2YVSA 3PM9A 5ADZA 1SB3B 5I1WA 2P13A 1AHVA 2Y4GA 1N60C 1N63C 2AXRA 3D2DA 1HSKA 4BBYA 4PVHA 4HG0A 3B9JB 1W1MA 1W1OA 2GQTA 1E0YA 2VAOA 2RK5A 2EXRA 2BVFA 3VTEA 1WVEA 2VFUA 1FO4A 1W1SA 2UUUA 5I1VA 2W54A 3NVZB 4O95A 3DEDA 3FWAA 2VFRA 3PQBA 4PYTA 4JAYA 3TX1A 3FW7A 5L6FA 1E8HA 1W1QA 3NVWB 3TSJA 2W3RA 3LLBA 3S1FA 2O3GA 2IPIA 2MBRA 4DNSA 5FXFA 3SR6B 5HHZA 4PWCA 3JS8A 1E8FA 4JB1A 4XLOA 2PLIA 3W8WA 2WDWA 1N62C 4PZFA 4EC3A 3W8ZA 5AE3A 2W3SA 4OALA 1VAOA 2Y3RA 3RJ8A 1ZXIC 1W1LA 3NS1B 3NRZB 3AMZA 3D2JA 1I19A 1N5XA 2OAIA 1QLUA 2P3HA 3LAEA 4PVKA 1ZR6A 5HMRA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1MBB A;  3BW7 A;  1WVF A;  1DZN A;  1FIQ B;  2PLS A;  1E8G A;  1UXY A;  4UD8 A;  5FXP A;  3NVY B;  1FFU C;  3NVV B;  1JRO A;  4BCA A;  3W8X A;  3DQ0 A;  1N5W C;  1AHZ A;  4PWB A;  2Q85 A;  4ZOH B;  2VFS A;  4PVJ A;  1W1K A;  3D2H A;  2Q4W A;  3FW9 A;  5HQX A;  1V97 A;  1W1J A;  1T3Q C;  4PVE A;  5G5H B;  5G5G B;  1W1R A;  3FW8 A;  3KJM A;  1FFV C;  3S1D A;  3GSY A;  2R8D A;  3HRD C;  2VFV A;  1VDV A;  5AE1 A;  2W55 A;  3S1E A;  3C0P A;  2P4P A;  3ETR B;  2I0K A;  3S1C A;  2GQU A;  3AN1 A;  4BC7 A;  5D79 A;  2VFT A;  1DIQ A;  4BC9 A;  3AM9 A;  2QKN A;  1QLT A;  1AHU A;  4ML8 A;  3I99 A;  2BVH A;  1MBT A;  1RM6 B;  2NQW A;  1N61 C;  5AE2 A;  3TSH A;  5FXD A;  2QPM A;  1DII A;  5FXE A;  2R2Z A;  2E3T A;  1F0X A;  3EUB 3;  1JRP A;  2BVG A;  4MLA A;  1WYG A;  2YVS A;  3PM9 A;  5ADZ A;  1SB3 B;  2P13 A;  1AHV A;  1N60 C;  1N63 C;  2AXR A;  3D2D A;  1HSK A;  4BBY A;  4PVH A;  4HG0 A;  3B9J B;  1W1M A;  1W1O A;  2GQT A;  1E0Y A;  2VAO A;  2RK5 A;  2EXR A;  2BVF A;  3VTE A;  1WVE A;  2VFU A;  1FO4 A;  1W1S A;  2W54 A;  3NVZ B;  4O95 A;  3DED A;  3FWA A;  2VFR A;  4PYT A;  4JAY A;  3TX1 A;  3FW7 A;  1E8H A;  1W1Q A;  3NVW B;  3TSJ A;  2W3R A;  3LLB A;  3S1F A;  2O3G A;  2MBR A;  4DNS A;  5FXF A;  3SR6 B;  5HHZ A;  4PWC A;  3JS8 A;  1E8F A;  4JB1 A;  4XLO A;  2PLI A;  3W8W A;  1N62 C;  4PZF A;  4EC3 A;  3W8Z A;  5AE3 A;  2W3S A;  4OAL A;  1VAO A;  1ZXI C;  1W1L A;  3NS1 B;  3NRZ B;  3AMZ A;  3D2J A;  1I19 A;  1N5X A;  2OAI A;  1QLU A;  2P3H A;  3LAE A;  4PVK A;  1ZR6 A;  5HMR A; 
#chains in the Genus database with same CATH topology
 1MBB A;  3BW7 A;  1WVF A;  1DZN A;  1FIQ B;  2PLS A;  1E8G A;  1UXY A;  4UD8 A;  5FXP A;  3NVY B;  1FFU C;  3POP A;  5K8E A;  3NVV B;  1JRO A;  4BCA A;  3W8X A;  3DQ0 A;  1N5W C;  3RJA A;  1AHZ A;  4PWB A;  2Q85 A;  4ZOH B;  2VFS A;  4PVJ A;  1W1K A;  3D2H A;  2Y3S A;  2Q4W A;  3FW9 A;  5HQX A;  1V97 A;  1W1J A;  1T3Q C;  4PVE A;  5G5H B;  5G5G B;  5L6G A;  1W1R A;  3FW8 A;  3KJM A;  1FFV C;  3S1D A;  3GSY A;  2R8D A;  3HRD C;  2VFV A;  1VDV A;  5AE1 A;  2W55 A;  5AWV A;  3S1E A;  3C0P A;  3EJD B;  2P4P A;  3ETR B;  2I0K A;  3HSU A;  3S1C A;  2GQU A;  3AN1 A;  4BC7 A;  5D79 A;  2VFT A;  1DIQ A;  4BC9 A;  3AM9 A;  2QKN A;  1QLT A;  1AHU A;  4ML8 A;  3I99 A;  2BVH A;  1MBT A;  1RM6 B;  2NQW A;  2Y08 A;  1N61 C;  5AE2 A;  3TSH A;  5FXD A;  2QPM A;  1DII A;  5FXE A;  2R2Z A;  2E3T A;  1F0X A;  2UUV A;  3EUB 3;  1JRP A;  2BVG A;  4MLA A;  1WYG A;  2YVS A;  3PM9 A;  5ADZ A;  1SB3 B;  5I1W A;  2P13 A;  1AHV A;  2Y4G A;  1N60 C;  1N63 C;  2AXR A;  3D2D A;  1HSK A;  4BBY A;  4PVH A;  4HG0 A;  3B9J B;  3EJE B;  1W1M A;  1W1O A;  2GQT A;  1E0Y A;  2VAO A;  2RK5 A;  2EXR A;  2BVF A;  3VTE A;  1WVE A;  2VFU A;  1FO4 A;  1W1S A;  2UUU A;  5I1V A;  2W54 A;  3NVZ B;  4O95 A;  3DED A;  3FWA A;  2VFR A;  3PQB A;  4PYT A;  4JAY A;  3TX1 A;  3FW7 A;  5L6F A;  1E8H A;  1W1Q A;  3NVW B;  3TSJ A;  2W3R A;  3LLB A;  3S1F A;  2O3G A;  2IPI A;  2MBR A;  4DNS A;  5FXF A;  3SR6 B;  5HHZ A;  4PWC A;  3JS8 A;  1E8F A;  4JB1 A;  4XLO A;  2PLI A;  3W8W A;  2WDW A;  1N62 C;  4PZF A;  4EC3 A;  3W8Z A;  5AE3 A;  2W3S A;  4OAL A;  1VAO A;  2Y3R A;  3RJ8 A;  1ZXI C;  1W1L A;  3NS1 B;  3NRZ B;  3AMZ A;  3D2J A;  1I19 A;  1N5X A;  2OAI A;  1QLU A;  2P3H A;  3LAE A;  4PVK A;  3EJB B;  1ZR6 A;  5HMR A; 
#chains in the Genus database with same CATH homology
 1MBB A;  3BW7 A;  1WVF A;  1DZN A;  1FIQ B;  2PLS A;  1E8G A;  1UXY A;  4UD8 A;  5FXP A;  3NVY B;  1FFU C;  3POP A;  5K8E A;  3NVV B;  1JRO A;  4BCA A;  3W8X A;  3DQ0 A;  1N5W C;  3RJA A;  1AHZ A;  4PWB A;  2Q85 A;  4ZOH B;  2VFS A;  4PVJ A;  1W1K A;  3D2H A;  2Y3S A;  2Q4W A;  3FW9 A;  5HQX A;  1V97 A;  1W1J A;  1T3Q C;  4PVE A;  5G5H B;  5G5G B;  5L6G A;  1W1R A;  3FW8 A;  3KJM A;  1FFV C;  3S1D A;  3GSY A;  2R8D A;  3HRD C;  2VFV A;  1VDV A;  5AE1 A;  2W55 A;  5AWV A;  3S1E A;  3C0P A;  2P4P A;  3ETR B;  2I0K A;  3HSU A;  3S1C A;  2GQU A;  3AN1 A;  4BC7 A;  5D79 A;  2VFT A;  1DIQ A;  4BC9 A;  3AM9 A;  2QKN A;  1QLT A;  1AHU A;  4ML8 A;  3I99 A;  2BVH A;  1MBT A;  1RM6 B;  2NQW A;  2Y08 A;  1N61 C;  5AE2 A;  3TSH A;  5FXD A;  2QPM A;  1DII A;  5FXE A;  2R2Z A;  2E3T A;  1F0X A;  2UUV A;  3EUB 3;  1JRP A;  2BVG A;  4MLA A;  1WYG A;  2YVS A;  3PM9 A;  5ADZ A;  1SB3 B;  5I1W A;  2P13 A;  1AHV A;  2Y4G A;  1N60 C;  1N63 C;  2AXR A;  3D2D A;  1HSK A;  4BBY A;  4PVH A;  4HG0 A;  3B9J B;  1W1M A;  1W1O A;  2GQT A;  1E0Y A;  2VAO A;  2RK5 A;  2EXR A;  2BVF A;  3VTE A;  1WVE A;  2VFU A;  1FO4 A;  1W1S A;  2UUU A;  5I1V A;  2W54 A;  3NVZ B;  4O95 A;  3DED A;  3FWA A;  2VFR A;  3PQB A;  4PYT A;  4JAY A;  3TX1 A;  3FW7 A;  5L6F A;  1E8H A;  1W1Q A;  3NVW B;  3TSJ A;  2W3R A;  3LLB A;  3S1F A;  2O3G A;  2IPI A;  2MBR A;  4DNS A;  5FXF A;  3SR6 B;  5HHZ A;  4PWC A;  3JS8 A;  1E8F A;  4JB1 A;  4XLO A;  2PLI A;  3W8W A;  2WDW A;  1N62 C;  4PZF A;  4EC3 A;  3W8Z A;  5AE3 A;  2W3S A;  4OAL A;  1VAO A;  2Y3R A;  3RJ8 A;  1ZXI C;  1W1L A;  3NS1 B;  3NRZ B;  3AMZ A;  3D2J A;  1I19 A;  1N5X A;  2OAI A;  1QLU A;  2P3H A;  3LAE A;  4PVK A;  1ZR6 A;  5HMR A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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