4Q3RC

Crystal structure of schistosoma mansoni arginase in complex with inhibitor abhdp
Total Genus 126
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
126
sequence length
345
structure length
333
Chain Sequence
KLLYTSANFLGIPTNRGQPKIGTYQGPELIRKSNFFQLVAEDGIQLTDCGDIIPVELNEAEDPQRFGMKWSRSFSLTTLRIAERVEELMKQSTPLVIVGGDHSMATGTILGHAEAKPDLCVLWIDAHGDINTPLNSASGNMHGMPLSFLVKELQDQIPWLDDFEGIKPCLNASNIAYIGLRDLDAHETHDIRKHGIAYFTMLDVDRMGIEAVIKEALLAVNPRLEKAIHLSFDIDALDPLVAPSTGTAVPGGLTLREGLRICEEVSATGKLSVVELAELNPLLGSQEDVLKTQSSAVHILRACLGHCRSGHLPFKVRNLTDQGIMSRAAHMQT
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase/hydrolase inhibitor
molecule keywords Arginase
publication title Crystal Structure of Schistosoma mansoni Arginase, a Potential Drug Target for the Treatment of Schistosomiasis.
pubmed doi rcsb
source organism Schistosoma mansoni
total genus 126
structure length 333
sequence length 345
chains with identical sequence D
ec nomenclature ec 3.5.3.1: Arginase.
pdb deposition date 2014-04-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF00491 Arginase Arginase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.800.10 Alpha Beta 3-Layer(aba) Sandwich Arginase; Chain A Ureohydrolase domain 4q3rC00
1P8NA 3THHA 3MMRA 5CEVA 4HXQA 1P8QA 3DJ8A 2ZAVA 1ZPGA 1P8RA 1R1OA 3E9BA 4Q3VA 5RLAA 3TF3A 1T5GA 3NIOA 3THJA 3MFVA 4GWDA 4Q3QA 3SL0A 1TA1A 1WOHA 1GQ6A 1HQGA 3THEA 1HQFA 5HJ9A 1GQ7A 1WOIA 3E6VA 4MXRA 4Q3PA 3LHLA 1HQHA 1T4TA 3SJTA 4Q3RC 4Q40A 1P8SA 4Q41A 4Q3UA 3KV2A 1P8PA 1TBLA 3F80A 4GWCA 2CEVA 2A0MA 1P8MA 4RHKA 4RHIA 1T4SA 4MYNA 4MYKA 2PHAA 5HJAA 4I06A 3SKKA 1RLAA 3RLAA 2EF5A 3PZLA 4HZEA 4RLAA 1HQXA 3LP7A 1CEVA 4Q3SA 4G3HA 1PQ3A 1TBJA 4IU1A 3TH7A 3GN0A 2RLAA 4CEVA 4RHJA 4RHQA 4HWWA 4Q42A 2AEBA 4IE1A 4IE2A 3CEVA 1D3VA 4RHMA 4IXVA 4GSVA 1XFKA 3NIPA 3E8QA 3GMZA 1TBHA 4GSZA 3LP4A 1WVBA 4MYLA 4Q3TA 1T4PA 4IU4A 4DZ4A 2EF4A 1WVAA 1T4RA 3E8ZA 1T5FA 1P8OA 4FCIA 4ITYA 1HQ5A 4IU0A 1WOGA 4GSMA 4IE3A 3M1RA 2EIVA 4IXUA 4FCKA 4Q3RA 3MFWA 2PHOA 4RHLA 1ZPEA 3MJLA 3SL1A 3E6KA 4MYFA 3NIQA 4IU5A 2PLLA
chains in the Genus database with same CATH superfamily
4BZ6A 4QA5A 1P8NA 3THHA 3MMRA 5CEVA 4HXQA 1P8QA 3DJ8A 2ZAVA 5DC5A 1ZPGA 1P8RA 1R1OA 3MZ3A 3E9BA 4Q3VA 5RLAA 3C0YA 3TF3A 3C10A 1T5GA 5G11A 5A2SA 1C3RA 5G3WA 5D1DA 3NIOA 2VQMA 3MFVA 3THJA 4GWDA 4Q3QA 5DC6A 3SL0A 1TA1A 1WOHA 1GQ6A 5FCWA 1HQGA 2VQJA 3THEA 5JI5A 1HQFA 4RN2A 5HJ9A 1T69A 1GQ7A 1WOIA 3E6VA 4MXRA 4CBYA 4Q3PA 3LHLA 1HQHA 5EFHA 2VCGA 1T4TA 3SJTA 3MAXA 4QA0A 3EZTA 4Q3RC 4Q40A 1P8SA 4Q41A 4Q3UA 3KV2A 1P8PA 5G1BA 5IWGA 4A69A 3MZ7A 1TBLA 5G10A 5THUA 3F80A 4GWCA 4QA2A 3RQDA 2CEVA 1VKGA 4ZUMA 2A0MA 2VQOA 2VQVA 4QA4A 5G1AA 1W22A 5G0HA 1P8MA 5EFBD 4RHKA 4ZUPA 1C3SA 5G1CA 4RHIA 3EW8A 1T4SA 4BZ9A 4MYNA 4MYKA 4QA7A 4ZUOA 3MZ4A 2PHAA 5EFJD 5HJAA 4I06A 3F07A 3SKKA 3ZNSA 1RLAA 5THTA 3RLAA 2V5XA 2EF5A 3PZLA 5G0YA 1ZZ0A 4HZEA 4RLAA 1HQXA 5EFKB 3Q9EA 5EENA 3MENA 5EEFA 5EFNA 3LP7A 1CEVA 4Q3SA 4G3HA 3Q9BA 1PQ3A 4BZ7A 5EF8A 1TBJA 4QA1A 4BZ8A 4IU1A 3TH7A 3GN0A 1C3PA 5BWZA 3F06A 2RLAA 5G0JA 4CEVA 3ZNRA 3Q9FA 4RHJA 5FUEA 4BKXB 5D1BA 5G0IA 5IX0A 4RHQA 3EZPA 1T67A 3C0ZA 4HWWA 4BZ5A 4Q42A 2AEBA 4IE1A 4IE2A 3CEVA 4RN1A 1D3VA 4RHMA 5DC8A 5EEIA 4IXVA 4CQFA 2VQQA 4GSVA 1XFKA 5EEKA 3NIPA 3E8QA 3GMZA 5D1CA 3F0RA 4LXZA 4ZURA 1TBHA 4GSZA 3LP4A 1WVBA 4MYLA 4Q3TA 4LY1A 4QA6A 5DC7A 5G0XA 3SFFA 1T4PA 4IU4A 5G17A 5ICNB 4DZ4A 5LI3A 2V5WA 3Q9CA 2EF4A 5EFGA 1WVAA 1T4RA 4ZUNA 3E8ZA 1T5FA 1ZZ3A 2VQWG 1P8OA 4FCIA 4ITYA 1HQ5A 4IU0A 5G0GA 1T64A 2GH6A 5THSA 1WOGA 4GSMA 4CBTA 4IE3A 5G13A 3M1RA 1ZZ1A 3SFHA 4RN0A 5G12A 2EIVA 4IXUA 4FCKA 4Q3RA 3MFWA 2PHOA 4QA3A 5EEMA 3MZ6A 4RHLA 5EF7A 1ZPEA 3MJLA 3SL1A 5THVA 3E6KA 4ZUQA 4MYFA 3EWFA 3NIQA 4IU5A 2PLLA
chains in the Genus database with same CATH topology
1P8NA 3THHA 3MMRA 5CEVA 4HXQA 1P8QA 3DJ8A 2ZAVA 1ZPGA 1P8RA 1R1OA 3E9BA 4Q3VA 5RLAA 3TF3A 1T5GA 3NIOA 3THJA 3MFVA 4GWDA 4Q3QA 3SL0A 1TA1A 1WOHA 1GQ6A 1HQGA 3THEA 1HQFA 5HJ9A 1GQ7A 1WOIA 3E6VA 4MXRA 4Q3PA 3LHLA 1HQHA 1T4TA 3SJTA 4Q3RC 4Q40A 1P8SA 4Q41A 4Q3UA 3KV2A 1P8PA 1TBLA 3F80A 4GWCA 2CEVA 2A0MA 1P8MA 4RHKA 4RHIA 1T4SA 4MYNA 4MYKA 2PHAA 5HJAA 4I06A 3SKKA 1RLAA 3RLAA 2EF5A 3PZLA 4HZEA 4RLAA 1HQXA 3LP7A 1CEVA 4Q3SA 4G3HA 1PQ3A 1TBJA 4IU1A 3TH7A 3GN0A 2RLAA 4CEVA 4RHJA 4RHQA 4HWWA 4Q42A 2AEBA 4IE1A 4IE2A 3CEVA 1D3VA 4RHMA 4IXVA 4GSVA 1XFKA 3NIPA 3E8QA 3GMZA 1TBHA 4GSZA 3LP4A 1WVBA 4MYLA 4Q3TA 1T4PA 4IU4A 4DZ4A 2EF4A 1WVAA 1T4RA 3E8ZA 1T5FA 1P8OA 4FCIA 4ITYA 1HQ5A 4IU0A 1WOGA 4GSMA 4IE3A 3M1RA 2EIVA 4IXUA 4FCKA 4Q3RA 3MFWA 2PHOA 4RHLA 1ZPEA 3MJLA 3SL1A 3E6KA 4MYFA 3NIQA 4IU5A 2PLLA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1P8N A;  3THH A;  3MMR A;  5CEV A;  4HXQ A;  1P8Q A;  3DJ8 A;  2ZAV A;  1ZPG A;  1P8R A;  1R1O A;  3E9B A;  4Q3V A;  5RLA A;  3TF3 A;  1T5G A;  3NIO A;  3THJ A;  3MFV A;  4GWD A;  4Q3Q A;  3SL0 A;  1TA1 A;  1WOH A;  1GQ6 A;  1HQG A;  3THE A;  1HQF A;  5HJ9 A;  1GQ7 A;  1WOI A;  3E6V A;  4MXR A;  4Q3P A;  3LHL A;  1HQH A;  1T4T A;  3SJT A;  4Q3R C;  4Q40 A;  1P8S A;  4Q41 A;  4Q3U A;  3KV2 A;  1P8P A;  1TBL A;  3F80 A;  4GWC A;  2CEV A;  2A0M A;  1P8M A;  4RHK A;  4RHI A;  1T4S A;  4MYN A;  4MYK A;  2PHA A;  5HJA A;  4I06 A;  3SKK A;  1RLA A;  3RLA A;  2EF5 A;  3PZL A;  4HZE A;  4RLA A;  1HQX A;  3LP7 A;  1CEV A;  4Q3S A;  4G3H A;  1PQ3 A;  1TBJ A;  4IU1 A;  3TH7 A;  3GN0 A;  2RLA A;  4CEV A;  4RHJ A;  4RHQ A;  4HWW A;  4Q42 A;  2AEB A;  4IE1 A;  4IE2 A;  3CEV A;  1D3V A;  4RHM A;  4IXV A;  4GSV A;  1XFK A;  3NIP A;  3E8Q A;  3GMZ A;  1TBH A;  4GSZ A;  3LP4 A;  1WVB A;  4MYL A;  4Q3T A;  1T4P A;  4IU4 A;  4DZ4 A;  2EF4 A;  1WVA A;  1T4R A;  3E8Z A;  1T5F A;  1P8O A;  4FCI A;  4ITY A;  1HQ5 A;  4IU0 A;  1WOG A;  4GSM A;  4IE3 A;  3M1R A;  2EIV A;  4IXU A;  4FCK A;  4Q3R A;  3MFW A;  2PHO A;  4RHL A;  1ZPE A;  3MJL A;  3SL1 A;  3E6K A;  4MYF A;  3NIQ A;  4IU5 A;  2PLL A; 
#chains in the Genus database with same CATH topology
 4BZ6 A;  4QA5 A;  1P8N A;  3THH A;  3MMR A;  5CEV A;  4HXQ A;  1P8Q A;  3DJ8 A;  2ZAV A;  5DC5 A;  1ZPG A;  1P8R A;  1R1O A;  3MZ3 A;  3E9B A;  4Q3V A;  5RLA A;  3C0Y A;  3TF3 A;  3C10 A;  1T5G A;  5G11 A;  5A2S A;  1C3R A;  5G3W A;  5D1D A;  3NIO A;  2VQM A;  3MFV A;  3THJ A;  4GWD A;  4Q3Q A;  5DC6 A;  3SL0 A;  1TA1 A;  1WOH A;  1GQ6 A;  5FCW A;  1HQG A;  2VQJ A;  3THE A;  5JI5 A;  1HQF A;  4RN2 A;  5HJ9 A;  1T69 A;  1GQ7 A;  1WOI A;  3E6V A;  4MXR A;  4CBY A;  4Q3P A;  3LHL A;  1HQH A;  5EFH A;  2VCG A;  1T4T A;  3SJT A;  3MAX A;  4QA0 A;  3EZT A;  4Q3R C;  4Q40 A;  1P8S A;  4Q41 A;  4Q3U A;  3KV2 A;  1P8P A;  5G1B A;  5IWG A;  4A69 A;  3MZ7 A;  1TBL A;  5G10 A;  5THU A;  3F80 A;  4GWC A;  4QA2 A;  3RQD A;  2CEV A;  1VKG A;  4ZUM A;  2A0M A;  2VQO A;  2VQV A;  4QA4 A;  5G1A A;  1W22 A;  5G0H A;  1P8M A;  5EFB D;  4RHK A;  4ZUP A;  1C3S A;  5G1C A;  4RHI A;  3EW8 A;  1T4S A;  4BZ9 A;  4MYN A;  4MYK A;  4QA7 A;  4ZUO A;  3MZ4 A;  2PHA A;  5EFJ D;  5HJA A;  4I06 A;  3F07 A;  3SKK A;  3ZNS A;  1RLA A;  5THT A;  3RLA A;  2V5X A;  2EF5 A;  3PZL A;  5G0Y A;  1ZZ0 A;  4HZE A;  4RLA A;  1HQX A;  5EFK B;  3Q9E A;  5EEN A;  3MEN A;  5EEF A;  5EFN A;  3LP7 A;  1CEV A;  4Q3S A;  4G3H A;  3Q9B A;  1PQ3 A;  4BZ7 A;  5EF8 A;  1TBJ A;  4QA1 A;  4BZ8 A;  4IU1 A;  3TH7 A;  3GN0 A;  1C3P A;  5BWZ A;  3F06 A;  2RLA A;  5G0J A;  4CEV A;  3ZNR A;  3Q9F A;  4RHJ A;  5FUE A;  4BKX B;  5D1B A;  5G0I A;  5IX0 A;  4RHQ A;  3EZP A;  1T67 A;  3C0Z A;  4HWW A;  4BZ5 A;  4Q42 A;  2AEB A;  4IE1 A;  4IE2 A;  3CEV A;  4RN1 A;  1D3V A;  4RHM A;  5DC8 A;  5EEI A;  4IXV A;  4CQF A;  2VQQ A;  4GSV A;  1XFK A;  5EEK A;  3NIP A;  3E8Q A;  3GMZ A;  5D1C A;  3F0R A;  4LXZ A;  4ZUR A;  1TBH A;  4GSZ A;  3LP4 A;  1WVB A;  4MYL A;  4Q3T A;  4LY1 A;  4QA6 A;  5DC7 A;  5G0X A;  3SFF A;  1T4P A;  4IU4 A;  5G17 A;  5ICN B;  4DZ4 A;  5LI3 A;  2V5W A;  3Q9C A;  2EF4 A;  5EFG A;  1WVA A;  1T4R A;  4ZUN A;  3E8Z A;  1T5F A;  1ZZ3 A;  2VQW G;  1P8O A;  4FCI A;  4ITY A;  1HQ5 A;  4IU0 A;  5G0G A;  1T64 A;  2GH6 A;  5THS A;  1WOG A;  4GSM A;  4CBT A;  4IE3 A;  5G13 A;  3M1R A;  1ZZ1 A;  3SFH A;  4RN0 A;  5G12 A;  2EIV A;  4IXU A;  4FCK A;  4Q3R A;  3MFW A;  2PHO A;  4QA3 A;  5EEM A;  3MZ6 A;  4RHL A;  5EF7 A;  1ZPE A;  3MJL A;  3SL1 A;  5THV A;  3E6K A;  4ZUQ A;  4MYF A;  3EWF A;  3NIQ A;  4IU5 A;  2PLL A; 
#chains in the Genus database with same CATH homology
 1P8N A;  3THH A;  3MMR A;  5CEV A;  4HXQ A;  1P8Q A;  3DJ8 A;  2ZAV A;  1ZPG A;  1P8R A;  1R1O A;  3E9B A;  4Q3V A;  5RLA A;  3TF3 A;  1T5G A;  3NIO A;  3THJ A;  3MFV A;  4GWD A;  4Q3Q A;  3SL0 A;  1TA1 A;  1WOH A;  1GQ6 A;  1HQG A;  3THE A;  1HQF A;  5HJ9 A;  1GQ7 A;  1WOI A;  3E6V A;  4MXR A;  4Q3P A;  3LHL A;  1HQH A;  1T4T A;  3SJT A;  4Q3R C;  4Q40 A;  1P8S A;  4Q41 A;  4Q3U A;  3KV2 A;  1P8P A;  1TBL A;  3F80 A;  4GWC A;  2CEV A;  2A0M A;  1P8M A;  4RHK A;  4RHI A;  1T4S A;  4MYN A;  4MYK A;  2PHA A;  5HJA A;  4I06 A;  3SKK A;  1RLA A;  3RLA A;  2EF5 A;  3PZL A;  4HZE A;  4RLA A;  1HQX A;  3LP7 A;  1CEV A;  4Q3S A;  4G3H A;  1PQ3 A;  1TBJ A;  4IU1 A;  3TH7 A;  3GN0 A;  2RLA A;  4CEV A;  4RHJ A;  4RHQ A;  4HWW A;  4Q42 A;  2AEB A;  4IE1 A;  4IE2 A;  3CEV A;  1D3V A;  4RHM A;  4IXV A;  4GSV A;  1XFK A;  3NIP A;  3E8Q A;  3GMZ A;  1TBH A;  4GSZ A;  3LP4 A;  1WVB A;  4MYL A;  4Q3T A;  1T4P A;  4IU4 A;  4DZ4 A;  2EF4 A;  1WVA A;  1T4R A;  3E8Z A;  1T5F A;  1P8O A;  4FCI A;  4ITY A;  1HQ5 A;  4IU0 A;  1WOG A;  4GSM A;  4IE3 A;  3M1R A;  2EIV A;  4IXU A;  4FCK A;  4Q3R A;  3MFW A;  2PHO A;  4RHL A;  1ZPE A;  3MJL A;  3SL1 A;  3E6K A;  4MYF A;  3NIQ A;  4IU5 A;  2PLL A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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