4QHUC

Crystal structure of il-17a/fab6785 complex
Total Genus 15
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
15
sequence length
119
structure length
119
Chain Sequence
CPNSEDKNFPRTVMVNLNIHNRNTNTNPKRSSDYYNRSTSPWNLHRNEDPERYPSVIWEAQCRHLGCINADGNVDYHMNSVPIQQEILVLRREPPHCPNSFRLEKILVSVGCTCVTPIV
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Immune system
molecule keywords Fab6785 light chain
publication title IL-17A Asymmetry in a Complex with a Neutralizing Antibody Fab6785 Reveals a Potential Mechanism of Receptor Differentiation
rcsb
source organism Homo sapiens
total genus 15
structure length 119
sequence length 119
chains with identical sequence D
ec nomenclature
pdb deposition date 2014-05-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF06083 IL17 Interleukin-17
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.90.10 Mainly Beta Ribbon Cystine Knot Cytokines, subunit B Cystine-knot cytokines 4qhuC00
3FUBB 4YCIC 4HSAA 5BQ8D 1JPYA 3E07A 4MPLA 2QJ9A 5F3HI 2BHKA 1QTYR 1HCNA 3MJGA 4GLSE 4AY9B 4EFVA 1SG1A 1REUA 1QFWA 3EVSB 2X1WA 4QCIC 1MJVA 4EDWV 4ZFFC 2VXSA 4QAFC 1BTGA 4HR9A 5HK5E 5BQCA 3S1BV 5BPUA 1KLAA 2IFGE 1MKKA 4GLNE 5HI5A 1HRPA 1WAQA 2H64A 4UI0A 3JVFA 1M4UL 2VPFA 1B8MA 1HCNB 1BJ1V 2QR0C 2GYRA 2P6AA 1CZ8V 1QFWB 1LX5A 4MQWB 3RJRA 1M4UA 4HQUA 4N1DA 1KLCA 2V5EB 1HCFA 5HHCA 2XACA 1SGFB 4LXRJ 1REWA 4FAOA 4MQWA 1NYSB 1ES7A 2KD3A 1KATW 4BV4L 4LXSJ 5BQEA 1HRPB 1S4YB 1XWDA 5HI4A 3BMPA 2R53A 5BQ8A 3P9WA 2ASKA 2GYZA 1RV6V 1TFGA 4MIDA 1B8MB 1TZIV 1HD4A 5JZ7A 1TZHV 5E4GA 4WPBA 4YCGC 4ZBNA 1NT3A 4XPJA 5FV2V 2PJYA 3HH2A 5BQBA 1BETA 4EDXV 3KFDA 3BDYV 1VPFA 2R52A 3QB4A 2FJGV 4EAXA 5BQEB 1TGKA 1VPPV 1XWDB 3EO1C 5BQ8B 3B4VA 1BMPA 1E9JA 2ARVA 4KZNA 4UHZA 1ZKZA 1AOCA 2GNNA 1B8KA 1LXIA 1WQ9A 1WWWV 2QCWA 5AEJA 4KV5A 1AGQA 4HQXA 2H62A 2XV7A 1PDGA 1FL7B 3BK3A 3MJKA 4UI1A 2ARPA 2X1XE 4QHUC 1BNDA 3V6BA 1FL7A 3V2AA 3SEKB 4UI2B 5HHDA 1B98A 5HHVA 5HK5A 2B0UA 1TGJA 2VWEA 4AY9A 1WQ9B 1MKGA 2QCQA 1FLTV 2GOOA 4KXZA 1WQ8A 3IJ2A 5F3BC 2GH0C 1FZVA 2FJHV 1KTZA 4X1JA 3S1KV 5HI3A 2C7WA 1DZ7A 2QJAA 1NYUB 5HHXA 2QJBA 2TGIA 1BNDB 5FV1V 3BUKA 3QTKA 4EC7A 4UHYA
chains in the Genus database with same CATH superfamily
3FUBB 4YCIC 4HSAA 5BQ8D 1JPYA 3E07A 4MPLA 2QJ9A 5F3HI 2BHKA 1QTYR 1HCNA 3MJGA 4GLSE 4AY9B 4EFVA 1SG1A 1REUA 1QFWA 3EVSB 2X1WA 4QCIC 1MJVA 4EDWV 4ZFFC 2VXSA 4QAFC 1BTGA 4HR9A 5HK5E 5BQCA 3S1BV 5BPUA 1KLAA 2IFGE 1MKKA 4GLNE 5HI5A 1HRPA 1WAQA 2H64A 4UI0A 3JVFA 1M4UL 2VPFA 1B8MA 1HCNB 1BJ1V 2QR0C 2GYRA 2P6AA 1CZ8V 1QFWB 1LX5A 4MQWB 3RJRA 1M4UA 4HQUA 4N1DA 1KLCA 2V5EB 1HCFA 5HHCA 2XACA 1SGFB 4LXRJ 1REWA 4FAOA 4MQWA 1NYSB 1ES7A 2KD3A 1KATW 4BV4L 4LXSJ 5BQEA 1HRPB 1S4YB 1XWDA 5HI4A 3BMPA 2R53A 5BQ8A 3P9WA 2ASKA 2GYZA 1RV6V 1TFGA 4MIDA 1B8MB 1TZIV 1HD4A 5JZ7A 1TZHV 5E4GA 4WPBA 4YCGC 4ZBNA 1NT3A 4XPJA 5FV2V 2PJYA 3HH2A 5BQBA 1BETA 4EDXV 3KFDA 3BDYV 1VPFA 2R52A 3QB4A 2FJGV 4EAXA 5BQEB 1TGKA 1VPPV 1XWDB 3EO1C 5BQ8B 3B4VA 1BMPA 1E9JA 2ARVA 4KZNA 4UHZA 1ZKZA 1AOCA 2GNNA 1B8KA 1LXIA 1WQ9A 1WWWV 2QCWA 5AEJA 4KV5A 1AGQA 4HQXA 2H62A 2XV7A 1PDGA 1FL7B 3BK3A 3MJKA 4UI1A 2ARPA 2X1XE 4QHUC 1BNDA 3V6BA 1FL7A 3V2AA 3SEKB 4UI2B 5HHDA 1B98A 5HHVA 5HK5A 2B0UA 1TGJA 2VWEA 4AY9A 1WQ9B 1MKGA 2QCQA 1FLTV 2GOOA 4KXZA 1WQ8A 3IJ2A 5F3BC 2GH0C 1FZVA 2FJHV 1KTZA 4X1JA 3S1KV 5HI3A 2C7WA 1DZ7A 2QJAA 1NYUB 5HHXA 2QJBA 2TGIA 1BNDB 5FV1V 3BUKA 3QTKA 4EC7A 4UHYA
chains in the Genus database with same CATH topology
3FUBB 4YCIC 4HSAA 5BQ8D 1JPYA 3E07A 4MPLA 2QJ9A 5F3HI 2BHKA 1QTYR 1HCNA 3MJGA 4GLSE 4AY9B 4EFVA 1SG1A 1REUA 1QFWA 3EVSB 2X1WA 4QCIC 1MJVA 4EDWV 4ZFFC 2VXSA 4QAFC 1BTGA 4HR9A 5HK5E 5BQCA 3S1BV 5BPUA 1KLAA 2IFGE 1MKKA 4GLNE 5HI5A 1HRPA 1WAQA 2H64A 4UI0A 3JVFA 1M4UL 2VPFA 1B8MA 1HCNB 1BJ1V 2QR0C 2GYRA 2P6AA 1CZ8V 1QFWB 1LX5A 4MQWB 3RJRA 1M4UA 4HQUA 4N1DA 1KLCA 2V5EB 1HCFA 5HHCA 2XACA 1SGFB 4LXRJ 1REWA 4FAOA 4MQWA 1NYSB 1ES7A 2KD3A 1KATW 4BV4L 4LXSJ 5BQEA 1HRPB 1S4YB 1XWDA 5HI4A 3BMPA 2R53A 5BQ8A 3P9WA 2ASKA 2GYZA 1RV6V 1TFGA 4MIDA 1B8MB 1TZIV 1HD4A 5JZ7A 1TZHV 5E4GA 4WPBA 4YCGC 4ZBNA 1NT3A 4XPJA 5FV2V 2PJYA 3HH2A 5BQBA 1BETA 4EDXV 3KFDA 3BDYV 1VPFA 2R52A 3QB4A 2FJGV 4EAXA 5BQEB 1TGKA 1VPPV 1XWDB 3EO1C 5BQ8B 3B4VA 1BMPA 1E9JA 2ARVA 4KZNA 4UHZA 1ZKZA 1AOCA 2GNNA 1B8KA 1LXIA 1WQ9A 1WWWV 2QCWA 5AEJA 4KV5A 1AGQA 4HQXA 2H62A 2XV7A 1PDGA 1FL7B 3BK3A 3MJKA 4UI1A 2ARPA 2X1XE 4QHUC 1BNDA 3V6BA 1FL7A 3V2AA 3SEKB 4UI2B 5HHDA 1B98A 5HHVA 5HK5A 2B0UA 1TGJA 2VWEA 4AY9A 1WQ9B 1MKGA 2QCQA 1FLTV 2GOOA 4KXZA 1WQ8A 3IJ2A 5F3BC 2GH0C 1FZVA 2FJHV 1KTZA 4X1JA 3S1KV 5HI3A 2C7WA 1DZ7A 2QJAA 1NYUB 5HHXA 2QJBA 2TGIA 1BNDB 5FV1V 3BUKA 3QTKA 4EC7A 4UHYA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3FUB B;  4YCI C;  4HSA A;  5BQ8 D;  1JPY A;  3E07 A;  4MPL A;  2QJ9 A;  5F3H I;  2BHK A;  1QTY R;  1HCN A;  3MJG A;  4GLS E;  4AY9 B;  4EFV A;  1SG1 A;  1REU A;  1QFW A;  3EVS B;  2X1W A;  4QCI C;  1MJV A;  4EDW V;  4ZFF C;  2VXS A;  4QAF C;  1BTG A;  4HR9 A;  5HK5 E;  5BQC A;  3S1B V;  5BPU A;  1KLA A;  2IFG E;  1MKK A;  4GLN E;  5HI5 A;  1HRP A;  1WAQ A;  2H64 A;  4UI0 A;  3JVF A;  1M4U L;  2VPF A;  1B8M A;  1HCN B;  1BJ1 V;  2QR0 C;  2GYR A;  2P6A A;  1CZ8 V;  1QFW B;  1LX5 A;  4MQW B;  3RJR A;  1M4U A;  4HQU A;  4N1D A;  1KLC A;  2V5E B;  1HCF A;  5HHC A;  2XAC A;  1SGF B;  4LXR J;  1REW A;  4FAO A;  4MQW A;  1NYS B;  1ES7 A;  2KD3 A;  1KAT W;  4BV4 L;  4LXS J;  5BQE A;  1HRP B;  1S4Y B;  1XWD A;  5HI4 A;  3BMP A;  2R53 A;  5BQ8 A;  3P9W A;  2ASK A;  2GYZ A;  1RV6 V;  1TFG A;  4MID A;  1B8M B;  1TZI V;  1HD4 A;  5JZ7 A;  1TZH V;  5E4G A;  4WPB A;  4YCG C;  4ZBN A;  1NT3 A;  4XPJ A;  5FV2 V;  2PJY A;  3HH2 A;  5BQB A;  1BET A;  4EDX V;  3KFD A;  3BDY V;  1VPF A;  2R52 A;  3QB4 A;  2FJG V;  4EAX A;  5BQE B;  1TGK A;  1VPP V;  1XWD B;  3EO1 C;  5BQ8 B;  3B4V A;  1BMP A;  1E9J A;  2ARV A;  4KZN A;  4UHZ A;  1ZKZ A;  1AOC A;  2GNN A;  1B8K A;  1LXI A;  1WQ9 A;  1WWW V;  2QCW A;  5AEJ A;  4KV5 A;  1AGQ A;  4HQX A;  2H62 A;  2XV7 A;  1PDG A;  1FL7 B;  3BK3 A;  3MJK A;  4UI1 A;  2ARP A;  2X1X E;  4QHU C;  1BND A;  3V6B A;  1FL7 A;  3V2A A;  3SEK B;  4UI2 B;  5HHD A;  1B98 A;  5HHV A;  5HK5 A;  2B0U A;  1TGJ A;  2VWE A;  4AY9 A;  1WQ9 B;  1MKG A;  2QCQ A;  1FLT V;  2GOO A;  4KXZ A;  1WQ8 A;  3IJ2 A;  5F3B C;  2GH0 C;  1FZV A;  2FJH V;  1KTZ A;  4X1J A;  3S1K V;  5HI3 A;  2C7W A;  1DZ7 A;  2QJA A;  1NYU B;  5HHX A;  2QJB A;  2TGI A;  1BND B;  5FV1 V;  3BUK A;  3QTK A;  4EC7 A;  4UHY A; 
#chains in the Genus database with same CATH topology
 3FUB B;  4YCI C;  4HSA A;  5BQ8 D;  1JPY A;  3E07 A;  4MPL A;  2QJ9 A;  5F3H I;  2BHK A;  1QTY R;  1HCN A;  3MJG A;  4GLS E;  4AY9 B;  4EFV A;  1SG1 A;  1REU A;  1QFW A;  3EVS B;  2X1W A;  4QCI C;  1MJV A;  4EDW V;  4ZFF C;  2VXS A;  4QAF C;  1BTG A;  4HR9 A;  5HK5 E;  5BQC A;  3S1B V;  5BPU A;  1KLA A;  2IFG E;  1MKK A;  4GLN E;  5HI5 A;  1HRP A;  1WAQ A;  2H64 A;  4UI0 A;  3JVF A;  1M4U L;  2VPF A;  1B8M A;  1HCN B;  1BJ1 V;  2QR0 C;  2GYR A;  2P6A A;  1CZ8 V;  1QFW B;  1LX5 A;  4MQW B;  3RJR A;  1M4U A;  4HQU A;  4N1D A;  1KLC A;  2V5E B;  1HCF A;  5HHC A;  2XAC A;  1SGF B;  4LXR J;  1REW A;  4FAO A;  4MQW A;  1NYS B;  1ES7 A;  2KD3 A;  1KAT W;  4BV4 L;  4LXS J;  5BQE A;  1HRP B;  1S4Y B;  1XWD A;  5HI4 A;  3BMP A;  2R53 A;  5BQ8 A;  3P9W A;  2ASK A;  2GYZ A;  1RV6 V;  1TFG A;  4MID A;  1B8M B;  1TZI V;  1HD4 A;  5JZ7 A;  1TZH V;  5E4G A;  4WPB A;  4YCG C;  4ZBN A;  1NT3 A;  4XPJ A;  5FV2 V;  2PJY A;  3HH2 A;  5BQB A;  1BET A;  4EDX V;  3KFD A;  3BDY V;  1VPF A;  2R52 A;  3QB4 A;  2FJG V;  4EAX A;  5BQE B;  1TGK A;  1VPP V;  1XWD B;  3EO1 C;  5BQ8 B;  3B4V A;  1BMP A;  1E9J A;  2ARV A;  4KZN A;  4UHZ A;  1ZKZ A;  1AOC A;  2GNN A;  1B8K A;  1LXI A;  1WQ9 A;  1WWW V;  2QCW A;  5AEJ A;  4KV5 A;  1AGQ A;  4HQX A;  2H62 A;  2XV7 A;  1PDG A;  1FL7 B;  3BK3 A;  3MJK A;  4UI1 A;  2ARP A;  2X1X E;  4QHU C;  1BND A;  3V6B A;  1FL7 A;  3V2A A;  3SEK B;  4UI2 B;  5HHD A;  1B98 A;  5HHV A;  5HK5 A;  2B0U A;  1TGJ A;  2VWE A;  4AY9 A;  1WQ9 B;  1MKG A;  2QCQ A;  1FLT V;  2GOO A;  4KXZ A;  1WQ8 A;  3IJ2 A;  5F3B C;  2GH0 C;  1FZV A;  2FJH V;  1KTZ A;  4X1J A;  3S1K V;  5HI3 A;  2C7W A;  1DZ7 A;  2QJA A;  1NYU B;  5HHX A;  2QJB A;  2TGI A;  1BND B;  5FV1 V;  3BUK A;  3QTK A;  4EC7 A;  4UHY A; 
#chains in the Genus database with same CATH homology
 3FUB B;  4YCI C;  4HSA A;  5BQ8 D;  1JPY A;  3E07 A;  4MPL A;  2QJ9 A;  5F3H I;  2BHK A;  1QTY R;  1HCN A;  3MJG A;  4GLS E;  4AY9 B;  4EFV A;  1SG1 A;  1REU A;  1QFW A;  3EVS B;  2X1W A;  4QCI C;  1MJV A;  4EDW V;  4ZFF C;  2VXS A;  4QAF C;  1BTG A;  4HR9 A;  5HK5 E;  5BQC A;  3S1B V;  5BPU A;  1KLA A;  2IFG E;  1MKK A;  4GLN E;  5HI5 A;  1HRP A;  1WAQ A;  2H64 A;  4UI0 A;  3JVF A;  1M4U L;  2VPF A;  1B8M A;  1HCN B;  1BJ1 V;  2QR0 C;  2GYR A;  2P6A A;  1CZ8 V;  1QFW B;  1LX5 A;  4MQW B;  3RJR A;  1M4U A;  4HQU A;  4N1D A;  1KLC A;  2V5E B;  1HCF A;  5HHC A;  2XAC A;  1SGF B;  4LXR J;  1REW A;  4FAO A;  4MQW A;  1NYS B;  1ES7 A;  2KD3 A;  1KAT W;  4BV4 L;  4LXS J;  5BQE A;  1HRP B;  1S4Y B;  1XWD A;  5HI4 A;  3BMP A;  2R53 A;  5BQ8 A;  3P9W A;  2ASK A;  2GYZ A;  1RV6 V;  1TFG A;  4MID A;  1B8M B;  1TZI V;  1HD4 A;  5JZ7 A;  1TZH V;  5E4G A;  4WPB A;  4YCG C;  4ZBN A;  1NT3 A;  4XPJ A;  5FV2 V;  2PJY A;  3HH2 A;  5BQB A;  1BET A;  4EDX V;  3KFD A;  3BDY V;  1VPF A;  2R52 A;  3QB4 A;  2FJG V;  4EAX A;  5BQE B;  1TGK A;  1VPP V;  1XWD B;  3EO1 C;  5BQ8 B;  3B4V A;  1BMP A;  1E9J A;  2ARV A;  4KZN A;  4UHZ A;  1ZKZ A;  1AOC A;  2GNN A;  1B8K A;  1LXI A;  1WQ9 A;  1WWW V;  2QCW A;  5AEJ A;  4KV5 A;  1AGQ A;  4HQX A;  2H62 A;  2XV7 A;  1PDG A;  1FL7 B;  3BK3 A;  3MJK A;  4UI1 A;  2ARP A;  2X1X E;  4QHU C;  1BND A;  3V6B A;  1FL7 A;  3V2A A;  3SEK B;  4UI2 B;  5HHD A;  1B98 A;  5HHV A;  5HK5 A;  2B0U A;  1TGJ A;  2VWE A;  4AY9 A;  1WQ9 B;  1MKG A;  2QCQ A;  1FLT V;  2GOO A;  4KXZ A;  1WQ8 A;  3IJ2 A;  5F3B C;  2GH0 C;  1FZV A;  2FJH V;  1KTZ A;  4X1J A;  3S1K V;  5HI3 A;  2C7W A;  1DZ7 A;  2QJA A;  1NYU B;  5HHX A;  2QJB A;  2TGI A;  1BND B;  5FV1 V;  3BUK A;  3QTK A;  4EC7 A;  4UHY A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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